EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007018 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: sfrs1a|sfrs1l|wu:fb52g10|wu:fb97g12|zgc:66146
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4101 bases
Position: chr3:9737426-9741526
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011385	RRM_1	PF00076.22	3.1e-32	1	2
ENSSMAP00000011385	RRM_1	PF00076.22	3.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000011534	-	2368	-	ENSSMAP00000011385	245 (aa)	-	A0A2U9B4G7

Gene Model

Click here to download ENSSMAG00000007018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007018's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007018	-	64	40.722	ENSSMAG00000019728	srsf5b	56	43.548
ENSSMAG00000007018	-	96	58.723	ENSSMAG00000002039	srsf9	76	68.586
ENSSMAG00000007018	-	82	34.728	ENSSMAG00000010899	srsf5a	61	38.342
ENSSMAG00000007018	-	78	85.000	ENSSMAG00000009719	-	78	85.000
ENSSMAG00000007018	-	65	42.690	ENSSMAG00000017447	-	50	42.690

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007018	-	98	83.128	ENSG00000136450	SRSF1	95	91.935	Homo_sapiens
ENSSMAG00000007018	-	100	97.551	ENSAPOG00000002748	-	100	97.551	Acanthochromis_polyacanthus
ENSSMAG00000007018	-	78	87.435	ENSAPOG00000008542	-	80	86.935	Acanthochromis_polyacanthus
ENSSMAG00000007018	-	78	87.435	ENSAMEG00000002635	SRSF1	77	88.482	Ailuropoda_melanoleuca
ENSSMAG00000007018	-	100	92.245	ENSACIG00000008091	srsf1a	100	92.245	Amphilophus_citrinellus
ENSSMAG00000007018	-	100	97.959	ENSAOCG00000010671	-	100	97.959	Amphiprion_ocellaris
ENSSMAG00000007018	-	78	86.935	ENSAOCG00000000337	-	80	86.935	Amphiprion_ocellaris
ENSSMAG00000007018	-	100	97.959	ENSAPEG00000009915	-	100	97.959	Amphiprion_percula
ENSSMAG00000007018	-	78	86.935	ENSAPEG00000023352	-	79	86.935	Amphiprion_percula
ENSSMAG00000007018	-	100	97.166	ENSATEG00000022403	-	100	97.166	Anabas_testudineus
ENSSMAG00000007018	-	81	85.859	ENSATEG00000021567	-	80	88.542	Anabas_testudineus
ENSSMAG00000007018	-	78	89.119	ENSACAG00000005542	-	78	91.710	Anolis_carolinensis
ENSSMAG00000007018	-	79	65.979	ENSANAG00000025417	-	73	66.492	Aotus_nancymaae
ENSSMAG00000007018	-	98	83.128	ENSANAG00000020583	-	93	91.176	Aotus_nancymaae
ENSSMAG00000007018	-	95	80.753	ENSAMXG00000035996	srsf1a	79	89.394	Astyanax_mexicanus
ENSSMAG00000007018	-	53	74.194	ENSAMXG00000024373	-	72	78.065	Astyanax_mexicanus
ENSSMAG00000007018	-	98	83.128	ENSBTAG00000014766	SRSF1	78	90.674	Bos_taurus
ENSSMAG00000007018	-	78	81.347	ENSCJAG00000008111	-	86	82.383	Callithrix_jacchus
ENSSMAG00000007018	-	98	83.128	ENSCJAG00000041713	-	93	91.176	Callithrix_jacchus
ENSSMAG00000007018	-	98	83.128	ENSCAFG00000017430	SRSF1	76	90.674	Canis_familiaris
ENSSMAG00000007018	-	98	83.128	ENSCAFG00020025632	-	76	90.674	Canis_lupus_dingo
ENSSMAG00000007018	-	78	88.083	ENSCHIG00000010787	SRSF1	78	90.674	Capra_hircus
ENSSMAG00000007018	-	98	83.128	ENSTSYG00000013899	-	93	91.176	Carlito_syrichta
ENSSMAG00000007018	-	98	83.128	ENSCPOG00000032681	-	78	90.674	Cavia_porcellus
ENSSMAG00000007018	-	98	83.128	ENSCCAG00000029484	-	93	91.176	Cebus_capucinus
ENSSMAG00000007018	-	98	83.128	ENSCATG00000042294	-	93	91.176	Cercocebus_atys
ENSSMAG00000007018	-	98	83.128	ENSCLAG00000014707	-	78	90.674	Chinchilla_lanigera
ENSSMAG00000007018	-	98	82.305	ENSCSAG00000005642	-	76	89.637	Chlorocebus_sabaeus
ENSSMAG00000007018	-	78	88.083	ENSCHOG00000001899	SRSF1	78	90.674	Choloepus_hoffmanni
ENSSMAG00000007018	-	98	84.362	ENSCPBG00000009851	-	78	92.228	Chrysemys_picta_bellii
ENSSMAG00000007018	-	98	83.128	ENSCANG00000029726	-	93	91.176	Colobus_angolensis_palliatus
ENSSMAG00000007018	-	98	83.128	ENSCGRG00001000670	Srsf1	76	90.674	Cricetulus_griseus_chok1gshd
ENSSMAG00000007018	-	98	83.128	ENSCGRG00000005590	Srsf1	78	90.674	Cricetulus_griseus_crigri
ENSSMAG00000007018	-	100	96.000	ENSCSEG00000014272	-	100	96.000	Cynoglossus_semilaevis
ENSSMAG00000007018	-	78	80.769	ENSCSEG00000009973	-	79	80.769	Cynoglossus_semilaevis
ENSSMAG00000007018	-	78	86.598	ENSCVAG00000005458	-	90	86.264	Cyprinodon_variegatus
ENSSMAG00000007018	-	100	97.551	ENSCVAG00000018617	-	100	97.551	Cyprinodon_variegatus
ENSSMAG00000007018	-	78	90.674	ENSDARG00000017843	srsf1b	79	92.746	Danio_rerio
ENSSMAG00000007018	-	78	84.729	ENSDARG00000057691	srsf1a	99	86.387	Danio_rerio
ENSSMAG00000007018	-	98	83.128	ENSDNOG00000011737	-	76	90.674	Dasypus_novemcinctus
ENSSMAG00000007018	-	98	83.128	ENSDORG00000015082	Srsf1	78	90.674	Dipodomys_ordii
ENSSMAG00000007018	-	73	88.333	ENSETEG00000005349	-	62	89.444	Echinops_telfairi
ENSSMAG00000007018	-	98	83.128	ENSEASG00005002922	-	76	90.674	Equus_asinus_asinus
ENSSMAG00000007018	-	78	88.083	ENSECAG00000016654	SRSF1	78	90.674	Equus_caballus
ENSSMAG00000007018	-	73	89.444	ENSEEUG00000009255	-	62	90.556	Erinaceus_europaeus
ENSSMAG00000007018	-	78	93.750	ENSELUG00000021646	srsf1a	76	94.271	Esox_lucius
ENSSMAG00000007018	-	98	83.128	ENSFCAG00000002250	-	90	90.055	Felis_catus
ENSSMAG00000007018	-	76	94.340	ENSFALG00000005062	-	76	73.575	Ficedula_albicollis
ENSSMAG00000007018	-	98	83.128	ENSFDAG00000010646	-	78	90.674	Fukomys_damarensis
ENSSMAG00000007018	-	100	97.143	ENSFHEG00000003174	srsf1a	100	97.143	Fundulus_heteroclitus
ENSSMAG00000007018	-	80	89.286	ENSGMOG00000014787	-	80	88.482	Gadus_morhua
ENSSMAG00000007018	-	78	89.637	ENSGALG00000005525	SRSF1	78	92.228	Gallus_gallus
ENSSMAG00000007018	-	78	85.864	ENSGACG00000020621	srsf1b	78	85.340	Gasterosteus_aculeatus
ENSSMAG00000007018	-	98	84.362	ENSGAGG00000022965	-	76	92.228	Gopherus_agassizii
ENSSMAG00000007018	-	98	83.128	ENSGGOG00000004386	SRSF1	93	91.176	Gorilla_gorilla
ENSSMAG00000007018	-	100	97.551	ENSHBUG00000016788	srsf1a	100	97.551	Haplochromis_burtoni
ENSSMAG00000007018	-	66	87.195	ENSHGLG00000000600	-	76	90.244	Heterocephalus_glaber_female
ENSSMAG00000007018	-	66	87.195	ENSHGLG00000000669	-	76	90.244	Heterocephalus_glaber_female
ENSSMAG00000007018	-	98	83.128	ENSHGLG00100016906	-	78	90.674	Heterocephalus_glaber_male
ENSSMAG00000007018	-	79	87.940	ENSHCOG00000018918	srsf1a	78	90.452	Hippocampus_comes
ENSSMAG00000007018	-	78	90.104	ENSIPUG00000008750	srsf1b	78	92.708	Ictalurus_punctatus
ENSSMAG00000007018	-	79	86.567	ENSIPUG00000017039	srsf1a	80	89.055	Ictalurus_punctatus
ENSSMAG00000007018	-	98	83.128	ENSSTOG00000000243	-	91	90.055	Ictidomys_tridecemlineatus
ENSSMAG00000007018	-	98	83.128	ENSJJAG00000000102	-	78	90.674	Jaculus_jaculus
ENSSMAG00000007018	-	100	96.341	ENSKMAG00000019232	srsf1a	100	96.341	Kryptolebias_marmoratus
ENSSMAG00000007018	-	78	81.122	ENSLBEG00000015294	-	79	82.653	Labrus_bergylta
ENSSMAG00000007018	-	100	98.776	ENSLBEG00000020864	-	100	98.776	Labrus_bergylta
ENSSMAG00000007018	-	78	91.667	ENSLACG00000014160	srsf1a	72	91.667	Latimeria_chalumnae
ENSSMAG00000007018	-	78	89.583	ENSLOCG00000005994	srsf1a	78	92.708	Lepisosteus_oculatus
ENSSMAG00000007018	-	78	88.083	ENSLAFG00000025743	SRSF1	78	90.674	Loxodonta_africana
ENSSMAG00000007018	-	98	83.128	ENSMFAG00000040003	-	93	91.176	Macaca_fascicularis
ENSSMAG00000007018	-	98	80.247	ENSMMUG00000003260	-	93	88.021	Macaca_mulatta
ENSSMAG00000007018	-	98	83.128	ENSMMUG00000004725	SRSF1	93	91.176	Macaca_mulatta
ENSSMAG00000007018	-	98	80.658	ENSMNEG00000015983	-	76	88.083	Macaca_nemestrina
ENSSMAG00000007018	-	98	83.128	ENSMNEG00000027680	-	93	91.176	Macaca_nemestrina
ENSSMAG00000007018	-	78	88.083	ENSMLEG00000040509	SRSF1	78	90.674	Mandrillus_leucophaeus
ENSSMAG00000007018	-	98	81.328	ENSMLEG00000015243	-	76	86.387	Mandrillus_leucophaeus
ENSSMAG00000007018	-	100	97.959	ENSMAMG00000018454	-	100	97.959	Mastacembelus_armatus
ENSSMAG00000007018	-	78	88.482	ENSMAMG00000019687	-	78	88.482	Mastacembelus_armatus
ENSSMAG00000007018	-	78	90.625	ENSMAMG00000019691	-	80	90.104	Mastacembelus_armatus
ENSSMAG00000007018	-	98	83.128	ENSMAUG00000021845	Srsf1	78	90.674	Mesocricetus_auratus
ENSSMAG00000007018	-	98	83.128	ENSMICG00000013639	-	93	91.176	Microcebus_murinus
ENSSMAG00000007018	-	98	83.128	ENSMOCG00000001996	Srsf1	78	90.674	Microtus_ochrogaster
ENSSMAG00000007018	-	100	93.061	ENSMMOG00000014354	srsf1a	100	93.061	Mola_mola
ENSSMAG00000007018	-	73	88.950	ENSMODG00000014781	-	62	89.503	Monodelphis_domestica
ENSSMAG00000007018	-	80	78.173	ENSMALG00000007763	-	77	81.675	Monopterus_albus
ENSSMAG00000007018	-	79	97.927	ENSMALG00000017129	-	76	97.927	Monopterus_albus
ENSSMAG00000007018	-	98	83.128	MGP_CAROLIEiJ_G0016943	Srsf1	90	90.055	Mus_caroli
ENSSMAG00000007018	-	98	83.128	ENSMUSG00000018379	Srsf1	90	90.055	Mus_musculus
ENSSMAG00000007018	-	98	83.128	MGP_PahariEiJ_G0018074	Srsf1	78	90.674	Mus_pahari
ENSSMAG00000007018	-	98	83.128	MGP_SPRETEiJ_G0017790	Srsf1	90	90.055	Mus_spretus
ENSSMAG00000007018	-	78	88.083	ENSMPUG00000015369	SRSF1	78	90.674	Mustela_putorius_furo
ENSSMAG00000007018	-	78	88.083	ENSMLUG00000011040	SRSF1	78	90.674	Myotis_lucifugus
ENSSMAG00000007018	-	80	86.802	ENSMLUG00000023995	-	77	86.387	Myotis_lucifugus
ENSSMAG00000007018	-	78	88.083	ENSNGAG00000011395	Srsf1	78	90.674	Nannospalax_galili
ENSSMAG00000007018	-	99	74.590	ENSNBRG00000008041	srsf1b	78	77.487	Neolamprologus_brichardi
ENSSMAG00000007018	-	98	83.128	ENSNLEG00000008088	-	93	91.176	Nomascus_leucogenys
ENSSMAG00000007018	-	53	85.606	ENSOPRG00000001234	-	72	89.394	Ochotona_princeps
ENSSMAG00000007018	-	98	83.128	ENSODEG00000011481	-	78	90.674	Octodon_degus
ENSSMAG00000007018	-	79	90.769	ENSONIG00000004860	-	79	90.104	Oreochromis_niloticus
ENSSMAG00000007018	-	100	97.551	ENSONIG00000013160	-	99	97.551	Oreochromis_niloticus
ENSSMAG00000007018	-	99	63.821	ENSOCUG00000010894	-	75	72.487	Oryctolagus_cuniculus
ENSSMAG00000007018	-	100	97.959	ENSORLG00000004580	srsf1a	100	97.959	Oryzias_latipes
ENSSMAG00000007018	-	100	97.959	ENSORLG00020009456	srsf1a	100	97.959	Oryzias_latipes_hni
ENSSMAG00000007018	-	100	97.551	ENSORLG00015014384	srsf1a	100	97.551	Oryzias_latipes_hsok
ENSSMAG00000007018	-	71	96.552	ENSOMEG00000004106	srsf1a	71	96.552	Oryzias_melastigma
ENSSMAG00000007018	-	82	88.725	ENSOGAG00000025950	-	78	90.674	Otolemur_garnettii
ENSSMAG00000007018	-	78	87.435	ENSOARG00000008323	SRSF1	77	87.435	Ovis_aries
ENSSMAG00000007018	-	98	83.128	ENSPPAG00000043403	-	93	91.176	Pan_paniscus
ENSSMAG00000007018	-	98	83.128	ENSPPRG00000004238	-	90	90.055	Panthera_pardus
ENSSMAG00000007018	-	98	83.128	ENSPTRG00000049077	SRSF1	93	91.176	Pan_troglodytes
ENSSMAG00000007018	-	98	83.128	ENSPANG00000022305	-	93	91.176	Papio_anubis
ENSSMAG00000007018	-	99	66.122	ENSPANG00000030275	-	75	66.495	Papio_anubis
ENSSMAG00000007018	-	78	89.583	ENSPKIG00000012857	srsf1b	78	92.708	Paramormyrops_kingsleyae
ENSSMAG00000007018	-	78	91.667	ENSPKIG00000007204	srsf1a	83	91.667	Paramormyrops_kingsleyae
ENSSMAG00000007018	-	78	82.383	ENSPSIG00000009000	-	72	91.729	Pelodiscus_sinensis
ENSSMAG00000007018	-	96	82.203	ENSPMGG00000005467	-	79	87.565	Periophthalmus_magnuspinnatus
ENSSMAG00000007018	-	79	93.264	ENSPMGG00000013112	-	83	93.264	Periophthalmus_magnuspinnatus
ENSSMAG00000007018	-	98	83.128	ENSPEMG00000021416	Srsf1	78	90.674	Peromyscus_maniculatus_bairdii
ENSSMAG00000007018	-	78	88.144	ENSPCIG00000006076	-	78	90.722	Phascolarctos_cinereus
ENSSMAG00000007018	-	79	86.802	ENSPFOG00000018325	-	69	87.047	Poecilia_formosa
ENSSMAG00000007018	-	79	86.802	ENSPLAG00000008416	srsf1b	78	87.047	Poecilia_latipinna
ENSSMAG00000007018	-	79	86.802	ENSPMEG00000002388	-	78	87.047	Poecilia_mexicana
ENSSMAG00000007018	-	50	97.561	ENSPMEG00000020607	-	99	97.561	Poecilia_mexicana
ENSSMAG00000007018	-	50	97.561	ENSPMEG00000014312	-	99	97.561	Poecilia_mexicana
ENSSMAG00000007018	-	100	97.551	ENSPREG00000009667	srsf1a	100	97.551	Poecilia_reticulata
ENSSMAG00000007018	-	98	83.128	ENSPPYG00000008240	SRSF1	78	90.674	Pongo_abelii
ENSSMAG00000007018	-	78	88.083	ENSPCAG00000005199	SRSF1	78	90.674	Procavia_capensis
ENSSMAG00000007018	-	79	71.717	ENSPCOG00000025736	-	93	72.251	Propithecus_coquereli
ENSSMAG00000007018	-	98	83.128	ENSPCOG00000023654	-	93	91.176	Propithecus_coquereli
ENSSMAG00000007018	-	53	95.714	ENSPVAG00000000519	-	53	95.714	Pteropus_vampyrus
ENSSMAG00000007018	-	78	92.147	ENSPNAG00000014601	srsf1b	78	92.147	Pygocentrus_nattereri
ENSSMAG00000007018	-	95	84.483	ENSPNAG00000022241	srsf1a	78	91.623	Pygocentrus_nattereri
ENSSMAG00000007018	-	78	88.083	ENSRNOG00000050323	Srsf1	78	90.674	Rattus_norvegicus
ENSSMAG00000007018	-	98	83.128	ENSRBIG00000034445	-	93	91.176	Rhinopithecus_bieti
ENSSMAG00000007018	-	98	83.128	ENSRROG00000041506	-	93	91.176	Rhinopithecus_roxellana
ENSSMAG00000007018	-	98	83.128	ENSSBOG00000025377	-	93	91.176	Saimiri_boliviensis_boliviensis
ENSSMAG00000007018	-	78	88.144	ENSSHAG00000002552	-	78	90.722	Sarcophilus_harrisii
ENSSMAG00000007018	-	78	92.670	ENSSFOG00015004800	srsf1a	77	92.670	Scleropages_formosus
ENSSMAG00000007018	-	99	71.371	ENSSDUG00000003929	-	83	79.293	Seriola_dumerili
ENSSMAG00000007018	-	100	98.776	ENSSDUG00000011303	-	100	98.776	Seriola_dumerili
ENSSMAG00000007018	-	78	78.646	ENSSLDG00000016868	-	76	78.125	Seriola_lalandi_dorsalis
ENSSMAG00000007018	-	74	80.435	ENSSLDG00000016895	-	77	83.152	Seriola_lalandi_dorsalis
ENSSMAG00000007018	-	100	98.776	ENSSLDG00000010543	-	100	98.776	Seriola_lalandi_dorsalis
ENSSMAG00000007018	-	73	89.444	ENSSARG00000010949	-	62	90.556	Sorex_araneus
ENSSMAG00000007018	-	98	84.362	ENSSPUG00000000804	-	91	91.713	Sphenodon_punctatus
ENSSMAG00000007018	-	78	83.495	ENSSPAG00000014152	-	80	83.495	Stegastes_partitus
ENSSMAG00000007018	-	100	97.561	ENSSPAG00000022562	-	100	97.561	Stegastes_partitus
ENSSMAG00000007018	-	98	83.128	ENSSSCG00000017626	-	78	90.674	Sus_scrofa
ENSSMAG00000007018	-	53	87.970	ENSTGUG00000008416	-	72	91.729	Taeniopygia_guttata
ENSSMAG00000007018	-	100	97.551	ENSTRUG00000003691	srsf1a	100	97.551	Takifugu_rubripes
ENSSMAG00000007018	-	100	97.551	ENSTNIG00000016223	srsf1a	99	97.551	Tetraodon_nigroviridis
ENSSMAG00000007018	-	73	86.111	ENSTBEG00000015378	-	62	89.444	Tupaia_belangeri
ENSSMAG00000007018	-	53	85.606	ENSTTRG00000007310	SRSF1	72	89.394	Tursiops_truncatus
ENSSMAG00000007018	-	78	88.083	ENSUAMG00000009858	SRSF1	78	90.674	Ursus_americanus
ENSSMAG00000007018	-	98	83.128	ENSUMAG00000000455	-	76	90.674	Ursus_maritimus
ENSSMAG00000007018	-	78	87.565	ENSVPAG00000010094	SRSF1	78	90.155	Vicugna_pacos
ENSSMAG00000007018	-	98	83.128	ENSVVUG00000011882	-	76	90.674	Vulpes_vulpes
ENSSMAG00000007018	-	78	91.623	ENSXETG00000008954	srsf1	79	83.962	Xenopus_tropicalis
ENSSMAG00000007018	-	100	97.551	ENSXMAG00000011766	srsf1a	100	97.551	Xiphophorus_maculatus