EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000007081 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 12246 bases
Position: chr15:8797301-8809546
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011496	SpoU_methylase	PF00588.19	4.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000011630	-	5631	-	ENSSMAP00000011496	1646 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007081's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007081	si:dkey-85a20.4	88	44.983	ENSG00000059588	TARBP1	91	44.183	Homo_sapiens
ENSSMAG00000007081	si:dkey-85a20.4	99	76.449	ENSAPOG00000016419	si:dkey-85a20.4	99	76.389	Acanthochromis_polyacanthus
ENSSMAG00000007081	si:dkey-85a20.4	82	45.533	ENSAMEG00000003359	TARBP1	99	45.279	Ailuropoda_melanoleuca
ENSSMAG00000007081	si:dkey-85a20.4	100	76.844	ENSATEG00000020266	si:dkey-85a20.4	100	76.904	Anabas_testudineus
ENSSMAG00000007081	si:dkey-85a20.4	82	46.585	ENSAPLG00000007666	TARBP1	99	47.214	Anas_platyrhynchos
ENSSMAG00000007081	si:dkey-85a20.4	82	43.933	ENSACAG00000001142	TARBP1	93	41.677	Anolis_carolinensis
ENSSMAG00000007081	si:dkey-85a20.4	85	44.768	ENSANAG00000022031	TARBP1	86	45.415	Aotus_nancymaae
ENSSMAG00000007081	si:dkey-85a20.4	93	54.475	ENSBTAG00000004517	TARBP1	90	54.280	Bos_taurus
ENSSMAG00000007081	si:dkey-85a20.4	99	42.673	ENSCJAG00000018155	TARBP1	91	44.337	Callithrix_jacchus
ENSSMAG00000007081	si:dkey-85a20.4	82	46.336	ENSCAFG00000011533	TARBP1	96	46.121	Canis_familiaris
ENSSMAG00000007081	si:dkey-85a20.4	82	46.170	ENSCAFG00020027141	TARBP1	99	42.378	Canis_lupus_dingo
ENSSMAG00000007081	si:dkey-85a20.4	88	44.707	ENSCHIG00000011437	TARBP1	91	43.832	Capra_hircus
ENSSMAG00000007081	si:dkey-85a20.4	79	46.466	ENSTSYG00000010382	TARBP1	96	46.351	Carlito_syrichta
ENSSMAG00000007081	si:dkey-85a20.4	77	43.233	ENSCAPG00000010831	TARBP1	99	43.310	Cavia_aperea
ENSSMAG00000007081	si:dkey-85a20.4	83	46.154	ENSCPOG00000013995	TARBP1	92	44.162	Cavia_porcellus
ENSSMAG00000007081	si:dkey-85a20.4	88	45.161	ENSCCAG00000037278	TARBP1	91	44.219	Cebus_capucinus
ENSSMAG00000007081	si:dkey-85a20.4	88	44.851	ENSCATG00000011754	TARBP1	91	44.183	Cercocebus_atys
ENSSMAG00000007081	si:dkey-85a20.4	79	46.039	ENSCLAG00000003655	TARBP1	96	46.245	Chinchilla_lanigera
ENSSMAG00000007081	si:dkey-85a20.4	78	46.778	ENSCSAG00000010100	TARBP1	99	46.702	Chlorocebus_sabaeus
ENSSMAG00000007081	si:dkey-85a20.4	76	45.730	ENSCPBG00000005587	TARBP1	78	53.165	Chrysemys_picta_bellii
ENSSMAG00000007081	si:dkey-85a20.4	82	46.287	ENSCANG00000034343	TARBP1	99	46.215	Colobus_angolensis_palliatus
ENSSMAG00000007081	si:dkey-85a20.4	82	45.710	ENSCGRG00001016690	Tarbp1	86	45.638	Cricetulus_griseus_chok1gshd
ENSSMAG00000007081	si:dkey-85a20.4	82	45.710	ENSCGRG00000016893	Tarbp1	92	45.638	Cricetulus_griseus_crigri
ENSSMAG00000007081	si:dkey-85a20.4	95	72.672	ENSCSEG00000005255	si:dkey-85a20.4	100	73.162	Cynoglossus_semilaevis
ENSSMAG00000007081	si:dkey-85a20.4	99	55.657	ENSDARG00000079055	si:dkey-85a20.4	99	71.088	Danio_rerio
ENSSMAG00000007081	si:dkey-85a20.4	91	44.537	ENSDNOG00000008637	TARBP1	82	46.638	Dasypus_novemcinctus
ENSSMAG00000007081	si:dkey-85a20.4	78	46.781	ENSDORG00000007984	Tarbp1	100	46.856	Dipodomys_ordii
ENSSMAG00000007081	si:dkey-85a20.4	99	43.060	ENSEASG00005000252	TARBP1	91	44.713	Equus_asinus_asinus
ENSSMAG00000007081	si:dkey-85a20.4	99	42.722	ENSECAG00000023673	TARBP1	90	46.774	Equus_caballus
ENSSMAG00000007081	si:dkey-85a20.4	99	61.212	ENSELUG00000012193	si:dkey-85a20.4	99	60.461	Esox_lucius
ENSSMAG00000007081	si:dkey-85a20.4	82	43.880	ENSFCAG00000014183	TARBP1	83	43.835	Felis_catus
ENSSMAG00000007081	si:dkey-85a20.4	79	47.130	ENSFALG00000013565	TARBP1	99	47.006	Ficedula_albicollis
ENSSMAG00000007081	si:dkey-85a20.4	77	44.903	ENSFDAG00000001308	TARBP1	99	44.978	Fukomys_damarensis
ENSSMAG00000007081	si:dkey-85a20.4	84	79.189	ENSFHEG00000007565	si:dkey-85a20.4	98	78.919	Fundulus_heteroclitus
ENSSMAG00000007081	si:dkey-85a20.4	85	64.947	ENSGMOG00000004549	si:dkey-85a20.4	99	64.806	Gadus_morhua
ENSSMAG00000007081	si:dkey-85a20.4	79	52.632	ENSGALG00000011000	TARBP1	99	45.500	Gallus_gallus
ENSSMAG00000007081	si:dkey-85a20.4	99	68.882	ENSGAFG00000007387	si:dkey-85a20.4	99	68.841	Gambusia_affinis
ENSSMAG00000007081	si:dkey-85a20.4	85	77.219	ENSGACG00000005865	si:dkey-85a20.4	99	77.143	Gasterosteus_aculeatus
ENSSMAG00000007081	si:dkey-85a20.4	82	47.945	ENSGAGG00000012102	TARBP1	87	47.873	Gopherus_agassizii
ENSSMAG00000007081	si:dkey-85a20.4	82	44.867	ENSGGOG00000022879	TARBP1	99	44.939	Gorilla_gorilla
ENSSMAG00000007081	si:dkey-85a20.4	100	75.983	ENSHBUG00000008877	si:dkey-85a20.4	100	75.681	Haplochromis_burtoni
ENSSMAG00000007081	si:dkey-85a20.4	87	45.301	ENSHGLG00000011592	TARBP1	92	44.720	Heterocephalus_glaber_female
ENSSMAG00000007081	si:dkey-85a20.4	83	46.614	ENSHGLG00100015169	TARBP1	94	46.543	Heterocephalus_glaber_male
ENSSMAG00000007081	si:dkey-85a20.4	96	58.987	ENSIPUG00000005249	si:dkey-85a20.4	98	53.081	Ictalurus_punctatus
ENSSMAG00000007081	si:dkey-85a20.4	81	46.075	ENSSTOG00000032291	TARBP1	96	45.928	Ictidomys_tridecemlineatus
ENSSMAG00000007081	si:dkey-85a20.4	83	43.562	ENSJJAG00000017840	Tarbp1	94	43.491	Jaculus_jaculus
ENSSMAG00000007081	si:dkey-85a20.4	89	68.049	ENSKMAG00000017546	si:dkey-85a20.4	99	63.063	Kryptolebias_marmoratus
ENSSMAG00000007081	si:dkey-85a20.4	83	79.470	ENSLBEG00000012132	si:dkey-85a20.4	95	79.470	Labrus_bergylta
ENSSMAG00000007081	si:dkey-85a20.4	99	43.345	ENSLACG00000004337	TARBP1	99	43.278	Latimeria_chalumnae
ENSSMAG00000007081	si:dkey-85a20.4	99	54.210	ENSLOCG00000016214	si:dkey-85a20.4	100	54.028	Lepisosteus_oculatus
ENSSMAG00000007081	si:dkey-85a20.4	82	46.418	ENSLAFG00000011394	TARBP1	94	44.287	Loxodonta_africana
ENSSMAG00000007081	si:dkey-85a20.4	88	43.699	ENSMFAG00000041068	TARBP1	92	43.289	Macaca_fascicularis
ENSSMAG00000007081	si:dkey-85a20.4	88	43.704	ENSMMUG00000021703	TARBP1	91	43.024	Macaca_mulatta
ENSSMAG00000007081	si:dkey-85a20.4	88	45.054	ENSMNEG00000045002	TARBP1	91	44.379	Macaca_nemestrina
ENSSMAG00000007081	si:dkey-85a20.4	82	45.954	ENSMLEG00000044182	TARBP1	99	45.882	Mandrillus_leucophaeus
ENSSMAG00000007081	si:dkey-85a20.4	100	75.743	ENSMAMG00000021760	si:dkey-85a20.4	100	75.638	Mastacembelus_armatus
ENSSMAG00000007081	si:dkey-85a20.4	100	76.165	ENSMZEG00005005751	si:dkey-85a20.4	100	75.862	Maylandia_zebra
ENSSMAG00000007081	si:dkey-85a20.4	99	42.303	ENSMAUG00000020968	Tarbp1	86	45.422	Mesocricetus_auratus
ENSSMAG00000007081	si:dkey-85a20.4	87	41.379	ENSMICG00000015280	TARBP1	90	40.558	Microcebus_murinus
ENSSMAG00000007081	si:dkey-85a20.4	82	44.835	ENSMOCG00000004128	Tarbp1	86	44.835	Microtus_ochrogaster
ENSSMAG00000007081	si:dkey-85a20.4	99	71.542	ENSMMOG00000007795	si:dkey-85a20.4	99	71.481	Mola_mola
ENSSMAG00000007081	si:dkey-85a20.4	82	45.415	ENSMODG00000008504	TARBP1	90	43.475	Monodelphis_domestica
ENSSMAG00000007081	si:dkey-85a20.4	99	75.307	ENSMALG00000002916	si:dkey-85a20.4	99	75.246	Monopterus_albus
ENSSMAG00000007081	si:dkey-85a20.4	99	41.657	MGP_CAROLIEiJ_G0031729	Tarbp1	78	59.770	Mus_caroli
ENSSMAG00000007081	si:dkey-85a20.4	82	45.403	ENSMUSG00000090290	Tarbp1	86	45.331	Mus_musculus
ENSSMAG00000007081	si:dkey-85a20.4	82	45.747	MGP_PahariEiJ_G0023326	Tarbp1	86	45.565	Mus_pahari
ENSSMAG00000007081	si:dkey-85a20.4	82	45.474	MGP_SPRETEiJ_G0032846	Tarbp1	86	45.403	Mus_spretus
ENSSMAG00000007081	si:dkey-85a20.4	75	46.395	ENSMPUG00000002802	TARBP1	99	46.395	Mustela_putorius_furo
ENSSMAG00000007081	si:dkey-85a20.4	82	44.682	ENSMLUG00000002414	TARBP1	99	44.684	Myotis_lucifugus
ENSSMAG00000007081	si:dkey-85a20.4	88	45.124	ENSNLEG00000002518	TARBP1	91	44.481	Nomascus_leucogenys
ENSSMAG00000007081	si:dkey-85a20.4	65	54.777	ENSMEUG00000011370	-	56	54.468	Notamacropus_eugenii
ENSSMAG00000007081	si:dkey-85a20.4	68	53.146	ENSOPRG00000013822	TARBP1	67	52.736	Ochotona_princeps
ENSSMAG00000007081	si:dkey-85a20.4	90	43.746	ENSODEG00000005238	TARBP1	96	43.950	Octodon_degus
ENSSMAG00000007081	si:dkey-85a20.4	85	78.773	ENSONIG00000009789	si:dkey-85a20.4	100	78.914	Oreochromis_niloticus
ENSSMAG00000007081	si:dkey-85a20.4	82	46.320	ENSOCUG00000017418	TARBP1	91	43.918	Oryctolagus_cuniculus
ENSSMAG00000007081	si:dkey-85a20.4	99	66.950	ENSORLG00000010529	si:dkey-85a20.4	99	66.646	Oryzias_latipes
ENSSMAG00000007081	si:dkey-85a20.4	99	67.071	ENSORLG00020019264	si:dkey-85a20.4	99	66.768	Oryzias_latipes_hni
ENSSMAG00000007081	si:dkey-85a20.4	99	66.646	ENSORLG00015003276	si:dkey-85a20.4	99	66.283	Oryzias_latipes_hsok
ENSSMAG00000007081	si:dkey-85a20.4	88	43.805	ENSOGAG00000002379	TARBP1	91	42.978	Otolemur_garnettii
ENSSMAG00000007081	si:dkey-85a20.4	87	44.799	ENSOARG00000003434	TARBP1	96	44.474	Ovis_aries
ENSSMAG00000007081	si:dkey-85a20.4	82	46.298	ENSPPAG00000028097	TARBP1	99	46.370	Pan_paniscus
ENSSMAG00000007081	si:dkey-85a20.4	82	44.676	ENSPPRG00000013561	TARBP1	88	44.284	Panthera_pardus
ENSSMAG00000007081	si:dkey-85a20.4	81	45.567	ENSPTIG00000009281	TARBP1	99	45.395	Panthera_tigris_altaica
ENSSMAG00000007081	si:dkey-85a20.4	88	45.185	ENSPTRG00000002124	TARBP1	91	44.581	Pan_troglodytes
ENSSMAG00000007081	si:dkey-85a20.4	88	45.051	ENSPANG00000021933	TARBP1	91	44.343	Papio_anubis
ENSSMAG00000007081	si:dkey-85a20.4	99	57.752	ENSPKIG00000016716	si:dkey-85a20.4	99	57.151	Paramormyrops_kingsleyae
ENSSMAG00000007081	si:dkey-85a20.4	77	47.259	ENSPSIG00000010699	TARBP1	99	47.181	Pelodiscus_sinensis
ENSSMAG00000007081	si:dkey-85a20.4	82	45.317	ENSPEMG00000006888	Tarbp1	90	45.168	Peromyscus_maniculatus_bairdii
ENSSMAG00000007081	si:dkey-85a20.4	74	68.878	ENSPCIG00000029710	TARBP1	81	68.878	Phascolarctos_cinereus
ENSSMAG00000007081	si:dkey-85a20.4	85	71.853	ENSPFOG00000013020	si:dkey-85a20.4	99	71.924	Poecilia_formosa
ENSSMAG00000007081	si:dkey-85a20.4	99	69.045	ENSPLAG00000006044	si:dkey-85a20.4	99	68.984	Poecilia_latipinna
ENSSMAG00000007081	si:dkey-85a20.4	99	69.045	ENSPMEG00000017857	si:dkey-85a20.4	99	68.984	Poecilia_mexicana
ENSSMAG00000007081	si:dkey-85a20.4	100	68.516	ENSPREG00000022753	si:dkey-85a20.4	100	68.272	Poecilia_reticulata
ENSSMAG00000007081	si:dkey-85a20.4	79	45.343	ENSPPYG00000000102	TARBP1	90	45.261	Pongo_abelii
ENSSMAG00000007081	si:dkey-85a20.4	66	76.871	ENSPCAG00000004808	TARBP1	72	76.871	Procavia_capensis
ENSSMAG00000007081	si:dkey-85a20.4	88	43.645	ENSPCOG00000005666	TARBP1	91	42.913	Propithecus_coquereli
ENSSMAG00000007081	si:dkey-85a20.4	78	59.091	ENSPVAG00000014798	TARBP1	91	38.962	Pteropus_vampyrus
ENSSMAG00000007081	si:dkey-85a20.4	99	72.761	ENSPNYG00000019135	si:dkey-85a20.4	99	72.639	Pundamilia_nyererei
ENSSMAG00000007081	si:dkey-85a20.4	99	40.332	ENSRNOG00000053574	Tarbp1	86	43.772	Rattus_norvegicus
ENSSMAG00000007081	si:dkey-85a20.4	89	42.914	ENSRBIG00000043362	TARBP1	98	42.809	Rhinopithecus_bieti
ENSSMAG00000007081	si:dkey-85a20.4	88	45.131	ENSRROG00000029527	TARBP1	92	45.168	Rhinopithecus_roxellana
ENSSMAG00000007081	si:dkey-85a20.4	82	46.204	ENSSBOG00000034503	TARBP1	96	45.876	Saimiri_boliviensis_boliviensis
ENSSMAG00000007081	si:dkey-85a20.4	81	45.614	ENSSHAG00000000013	TARBP1	99	45.541	Sarcophilus_harrisii
ENSSMAG00000007081	si:dkey-85a20.4	83	60.725	ENSSFOG00015002660	si:dkey-85a20.4	97	62.938	Scleropages_formosus
ENSSMAG00000007081	si:dkey-85a20.4	100	76.848	ENSSDUG00000023566	si:dkey-85a20.4	100	76.727	Seriola_dumerili
ENSSMAG00000007081	si:dkey-85a20.4	99	81.155	ENSSLDG00000020200	si:dkey-85a20.4	100	80.729	Seriola_lalandi_dorsalis
ENSSMAG00000007081	si:dkey-85a20.4	74	57.407	ENSSARG00000012207	TARBP1	76	57.176	Sorex_araneus
ENSSMAG00000007081	si:dkey-85a20.4	99	42.042	ENSSPUG00000015364	TARBP1	99	42.282	Sphenodon_punctatus
ENSSMAG00000007081	si:dkey-85a20.4	99	77.188	ENSSPAG00000007213	si:dkey-85a20.4	99	77.369	Stegastes_partitus
ENSSMAG00000007081	si:dkey-85a20.4	99	43.452	ENSSSCG00000010160	TARBP1	91	44.977	Sus_scrofa
ENSSMAG00000007081	si:dkey-85a20.4	79	46.125	ENSTGUG00000010214	TARBP1	99	46.426	Taeniopygia_guttata
ENSSMAG00000007081	si:dkey-85a20.4	94	66.261	ENSTNIG00000016586	si:dkey-85a20.4	99	73.757	Tetraodon_nigroviridis
ENSSMAG00000007081	si:dkey-85a20.4	78	41.275	ENSTTRG00000008707	TARBP1	83	41.145	Tursiops_truncatus
ENSSMAG00000007081	si:dkey-85a20.4	80	45.670	ENSUMAG00000006730	TARBP1	98	45.670	Ursus_maritimus
ENSSMAG00000007081	si:dkey-85a20.4	63	76.344	ENSVPAG00000007665	TARBP1	73	76.344	Vicugna_pacos
ENSSMAG00000007081	si:dkey-85a20.4	82	46.308	ENSVVUG00000007460	TARBP1	99	47.794	Vulpes_vulpes
ENSSMAG00000007081	si:dkey-85a20.4	82	43.519	ENSXETG00000016224	tarbp1	99	43.519	Xenopus_tropicalis
ENSSMAG00000007081	si:dkey-85a20.4	82	74.114	ENSXCOG00000011779	si:dkey-85a20.4	99	74.114	Xiphophorus_couchianus
ENSSMAG00000007081	si:dkey-85a20.4	63	71.388	ENSXMAG00000009600	si:dkey-85a20.4	100	71.483	Xiphophorus_maculatus