EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007121 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-32e23.4
Alias: -
Full Name: si:dkey-32e23.4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8036 bases
Position: chr9:8638805-8646840
Accession: ZDB-GENE-081105-41
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011612	MMR_HSR1	PF01926.23	4.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000011773	-	4810	-	ENSSMAP00000011623	699 (aa)	-	-
ENSSMAT00000011761	-	5101	-	ENSSMAP00000011612	686 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007121's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007121	si:dkey-32e23.4	96	68.956	ENSSMAG00000008336	dnm1l	100	68.956
ENSSMAG00000007121	si:dkey-32e23.4	96	71.408	ENSSMAG00000019922	-	100	71.408

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007121	si:dkey-32e23.4	96	92.121	ENSCVAG00000010346	si:dkey-32e23.4	100	92.121	Cyprinodon_variegatus
ENSSMAG00000007121	si:dkey-32e23.4	96	88.030	ENSELUG00000017713	si:dkey-32e23.4	100	88.030	Esox_lucius
ENSSMAG00000007121	si:dkey-32e23.4	96	91.818	ENSFHEG00000019298	si:dkey-32e23.4	100	91.818	Fundulus_heteroclitus
ENSSMAG00000007121	si:dkey-32e23.4	96	79.940	ENSGMOG00000005670	si:dkey-32e23.4	100	79.940	Gadus_morhua
ENSSMAG00000007121	si:dkey-32e23.4	96	91.667	ENSHCOG00000018024	si:dkey-32e23.4	100	91.667	Hippocampus_comes
ENSSMAG00000007121	si:dkey-32e23.4	96	88.048	ENSIPUG00000007113	si:dkey-32e23.4	100	88.048	Ictalurus_punctatus
ENSSMAG00000007121	si:dkey-32e23.4	96	93.939	ENSLBEG00000004848	si:dkey-32e23.4	100	93.939	Labrus_bergylta
ENSSMAG00000007121	si:dkey-32e23.4	96	94.242	ENSMALG00000006625	si:dkey-32e23.4	100	94.242	Monopterus_albus
ENSSMAG00000007121	si:dkey-32e23.4	97	90.483	ENSORLG00000011119	si:dkey-32e23.4	97	90.483	Oryzias_latipes
ENSSMAG00000007121	si:dkey-32e23.4	96	89.410	ENSORLG00020006829	si:dkey-32e23.4	100	89.410	Oryzias_latipes_hni
ENSSMAG00000007121	si:dkey-32e23.4	96	90.606	ENSORLG00015021365	si:dkey-32e23.4	100	90.606	Oryzias_latipes_hsok
ENSSMAG00000007121	si:dkey-32e23.4	96	89.747	ENSOMEG00000009143	si:dkey-32e23.4	100	89.747	Oryzias_melastigma
ENSSMAG00000007121	si:dkey-32e23.4	96	91.667	ENSPLAG00000023009	si:dkey-32e23.4	100	91.667	Poecilia_latipinna
ENSSMAG00000007121	si:dkey-32e23.4	96	91.667	ENSPMEG00000009231	si:dkey-32e23.4	100	91.667	Poecilia_mexicana
ENSSMAG00000007121	si:dkey-32e23.4	96	85.174	ENSPNAG00000020681	si:dkey-32e23.4	100	85.174	Pygocentrus_nattereri
ENSSMAG00000007121	si:dkey-32e23.4	96	93.636	ENSSDUG00000019756	si:dkey-32e23.4	100	93.636	Seriola_dumerili
ENSSMAG00000007121	si:dkey-32e23.4	96	92.273	ENSSPAG00000011027	si:dkey-32e23.4	100	92.273	Stegastes_partitus