EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSMAG00000007203 (Gene tree)
Gene ID
-
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1%2C RNA-binding
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Plus strand
Length
14254 bases
Position
chr11:5738853-5753106
Accession
ZDB-GENE-030131-8623
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000012040CSDPF00313.221e-8015
ENSSMAP00000012040CSDPF00313.221e-8025
ENSSMAP00000012040CSDPF00313.221e-8035
ENSSMAP00000012040CSDPF00313.221e-8045
ENSSMAP00000012040CSDPF00313.221e-8055
ENSSMAP00000011985CSDPF00313.221.7e-8015
ENSSMAP00000011985CSDPF00313.221.7e-8025
ENSSMAP00000011985CSDPF00313.221.7e-8035
ENSSMAP00000011985CSDPF00313.221.7e-8045
ENSSMAP00000011985CSDPF00313.221.7e-8055
ENSSMAP00000011807CSDPF00313.223.8e-8015
ENSSMAP00000011807CSDPF00313.223.8e-8025
ENSSMAP00000011807CSDPF00313.223.8e-8035
ENSSMAP00000011807CSDPF00313.223.8e-8045
ENSSMAP00000011807CSDPF00313.223.8e-8055
ENSSMAP00000011851CSDPF00313.225e-8015
ENSSMAP00000011851CSDPF00313.225e-8025
ENSSMAP00000011851CSDPF00313.225e-8035
ENSSMAP00000011851CSDPF00313.225e-8045
ENSSMAP00000011851CSDPF00313.225e-8055
ENSSMAP00000011899CSDPF00313.226.1e-8015
ENSSMAP00000011899CSDPF00313.226.1e-8025
ENSSMAP00000011899CSDPF00313.226.1e-8035
ENSSMAP00000011899CSDPF00313.226.1e-8045
ENSSMAP00000011899CSDPF00313.226.1e-8055
ENSSMAP00000011938CSDPF00313.222.4e-7815
ENSSMAP00000011938CSDPF00313.222.4e-7825
ENSSMAP00000011938CSDPF00313.222.4e-7835
ENSSMAP00000011938CSDPF00313.222.4e-7845
ENSSMAP00000011938CSDPF00313.222.4e-7855
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000012092-3538-ENSSMAP00000011938910 (aa)--
ENSSMAT00000012195-2307-ENSSMAP00000012040768 (aa)--
ENSSMAT00000011957-3601-ENSSMAP00000011807931 (aa)--
ENSSMAT00000012002-3583-ENSSMAP00000011851925 (aa)--
ENSSMAT00000012050-3571-ENSSMAP00000011899921 (aa)--
ENSSMAT00000012139-3130-ENSSMAP00000011985816 (aa)-A0A2U9BY96
Gene Model
Click here to download ENSSMAG00000007203's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007203's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000007203csde110078.182ENSG00000009307CSDE110084.559Homo_sapiens
ENSSMAG00000007203csde110094.531ENSAPOG00000015538csde110094.531Acanthochromis_polyacanthus
ENSSMAG00000007203csde110077.403ENSAMEG00000017129CSDE19477.403Ailuropoda_melanoleuca
ENSSMAG00000007203csde19092.432ENSACIG00000015175csde110092.432Amphilophus_citrinellus
ENSSMAG00000007203csde110094.531ENSAOCG00000011510csde110094.531Amphiprion_ocellaris
ENSSMAG00000007203csde110094.661ENSAPEG00000007194csde110094.661Amphiprion_percula
ENSSMAG00000007203csde110093.758ENSATEG00000003864csde110093.758Anabas_testudineus
ENSSMAG00000007203csde110079.714ENSAPLG00000008797CSDE110079.714Anas_platyrhynchos
ENSSMAG00000007203csde110077.411ENSACAG00000003120CSDE110077.411Anolis_carolinensis
ENSSMAG00000007203csde110078.052ENSANAG00000024665CSDE19974.446Aotus_nancymaae
ENSSMAG00000007203csde19361.837ENSANAG00000028396-9162.712Aotus_nancymaae
ENSSMAG00000007203csde110092.848ENSACLG00000013296csde110093.117Astatotilapia_calliptera
ENSSMAG00000007203csde110086.252ENSAMXG00000007436csde110086.252Astyanax_mexicanus
ENSSMAG00000007203csde110077.922ENSBTAG00000000678CSDE110077.922Bos_taurus
ENSSMAG00000007203csde110078.052ENSCJAG00000012565CSDE19974.562Callithrix_jacchus
ENSSMAG00000007203csde19878.647ENSCAFG00000009618CSDE19478.647Canis_familiaris
ENSSMAG00000007203csde110078.442ENSCAFG00020000481CSDE110078.442Canis_lupus_dingo
ENSSMAG00000007203csde110077.922ENSCHIG00000017250CSDE110077.922Capra_hircus
ENSSMAG00000007203csde110078.182ENSTSYG00000003747CSDE110078.182Carlito_syrichta
ENSSMAG00000007203csde110067.033ENSCAPG00000015128CSDE110067.033Cavia_aperea
ENSSMAG00000007203csde110072.727ENSCPOG00000040388CSDE110072.727Cavia_porcellus
ENSSMAG00000007203csde19755.778ENSCCAG00000030878-9155.844Cebus_capucinus
ENSSMAG00000007203csde110078.052ENSCCAG00000036794CSDE110075.732Cebus_capucinus
ENSSMAG00000007203csde19557.346ENSCCAG00000033677-9957.346Cebus_capucinus
ENSSMAG00000007203csde110078.182ENSCATG00000036962CSDE19778.182Cercocebus_atys
ENSSMAG00000007203csde110078.442ENSCLAG00000006618CSDE110078.442Chinchilla_lanigera
ENSSMAG00000007203csde110075.854ENSCSAG00000001658CSDE19974.679Chlorocebus_sabaeus
ENSSMAG00000007203csde110082.524ENSCHOG00000000918CSDE19080.793Choloepus_hoffmanni
ENSSMAG00000007203csde110079.844ENSCPBG00000016547CSDE110079.844Chrysemys_picta_bellii
ENSSMAG00000007203csde19842.771ENSCING00000014465-9642.771Ciona_intestinalis
ENSSMAG00000007203csde19741.807ENSCSAVG00000008100-10044.280Ciona_savignyi
ENSSMAG00000007203csde110078.182ENSCANG00000035096CSDE19778.182Colobus_angolensis_palliatus
ENSSMAG00000007203csde19971.927ENSCANG00000031069-9479.336Colobus_angolensis_palliatus
ENSSMAG00000007203csde110063.896ENSCGRG00001014011-10066.221Cricetulus_griseus_chok1gshd
ENSSMAG00000007203csde110077.662ENSCGRG00001016833-10077.662Cricetulus_griseus_chok1gshd
ENSSMAG00000007203csde19774.667ENSCGRG00000002225-10074.667Cricetulus_griseus_crigri
ENSSMAG00000007203csde110073.478ENSCGRG00000005831-10073.478Cricetulus_griseus_crigri
ENSSMAG00000007203csde110092.328ENSCSEG00000002620csde110092.328Cynoglossus_semilaevis
ENSSMAG00000007203csde110091.938ENSCVAG00000001344csde110091.938Cyprinodon_variegatus
ENSSMAG00000007203csde110086.675ENSDARG00000074758csde110088.489Danio_rerio
ENSSMAG00000007203csde110078.210ENSDNOG00000010287-9378.210Dasypus_novemcinctus
ENSSMAG00000007203csde15958.051ENSDNOG00000034464-9960.000Dasypus_novemcinctus
ENSSMAG00000007203csde19977.061ENSDORG00000011609Csde110076.900Dipodomys_ordii
ENSSMAG00000007203csde19847.951FBgn0263352Unr8447.115Drosophila_melanogaster
ENSSMAG00000007203csde19960.286ENSETEG00000013678-9960.286Echinops_telfairi
ENSSMAG00000007203csde19081.301ENSETEG00000002491-8773.487Echinops_telfairi
ENSSMAG00000007203csde19069.889ENSETEG00000006280-9969.889Echinops_telfairi
ENSSMAG00000007203csde17954.455ENSETEG00000007109-9956.701Echinops_telfairi
ENSSMAG00000007203csde19954.447ENSEBUG00000008647csde19952.797Eptatretus_burgeri
ENSSMAG00000007203csde110078.701ENSEASG00005006284CSDE110076.341Equus_asinus_asinus
ENSSMAG00000007203csde110078.701ENSECAG00000020885CSDE19978.601Equus_caballus
ENSSMAG00000007203csde19381.308ENSEEUG00000006286CSDE17475.916Erinaceus_europaeus
ENSSMAG00000007203csde110088.741ENSELUG00000015507csde110087.840Esox_lucius
ENSSMAG00000007203csde110078.442ENSFCAG00000029266CSDE110078.442Felis_catus
ENSSMAG00000007203csde110076.923ENSFALG00000003407CSDE110076.923Ficedula_albicollis
ENSSMAG00000007203csde19977.211ENSFDAG00000007882CSDE110077.049Fukomys_damarensis
ENSSMAG00000007203csde19891.656ENSFHEG00000010799csde19991.656Fundulus_heteroclitus
ENSSMAG00000007203csde19987.760ENSGMOG00000012731csde110087.760Gadus_morhua
ENSSMAG00000007203csde19877.239ENSGALG00000002139CSDE19877.239Gallus_gallus
ENSSMAG00000007203csde19490.992ENSGAFG00000005241csde19590.992Gambusia_affinis
ENSSMAG00000007203csde19991.544ENSGACG00000004544csde110091.544Gasterosteus_aculeatus
ENSSMAG00000007203csde110079.844ENSGAGG00000017685CSDE110077.411Gopherus_agassizii
ENSSMAG00000007203csde110078.182ENSGGOG00000002164CSDE110078.182Gorilla_gorilla
ENSSMAG00000007203csde110092.848ENSHBUG00000020315csde110093.117Haplochromis_burtoni
ENSSMAG00000007203csde19767.556ENSHGLG00000010039-10067.556Heterocephalus_glaber_female
ENSSMAG00000007203csde110064.181ENSHGLG00000019549-10064.181Heterocephalus_glaber_female
ENSSMAG00000007203csde19968.666ENSHGLG00000008555-10068.554Heterocephalus_glaber_female
ENSSMAG00000007203csde19566.527ENSHGLG00000000650-9966.527Heterocephalus_glaber_female
ENSSMAG00000007203csde110070.130ENSHGLG00000003829-10070.130Heterocephalus_glaber_female
ENSSMAG00000007203csde19967.759ENSHGLG00000007471-9867.759Heterocephalus_glaber_female
ENSSMAG00000007203csde110070.909ENSHGLG00000009620-10071.169Heterocephalus_glaber_female
ENSSMAG00000007203csde110078.052ENSHGLG00100019438-10078.052Heterocephalus_glaber_male
ENSSMAG00000007203csde19966.841ENSHGLG00100007287-9866.841Heterocephalus_glaber_male
ENSSMAG00000007203csde19762.000ENSHGLG00100004833-10062.000Heterocephalus_glaber_male
ENSSMAG00000007203csde19366.203ENSHGLG00100004195-10066.203Heterocephalus_glaber_male
ENSSMAG00000007203csde110065.714ENSHGLG00100012072-10065.714Heterocephalus_glaber_male
ENSSMAG00000007203csde19767.333ENSHGLG00100006910-10067.333Heterocephalus_glaber_male
ENSSMAG00000007203csde19964.190ENSHGLG00100002245-9966.527Heterocephalus_glaber_male
ENSSMAG00000007203csde110064.156ENSHGLG00100001846-10064.156Heterocephalus_glaber_male
ENSSMAG00000007203csde110091.157ENSHCOG00000004158csde110091.157Hippocampus_comes
ENSSMAG00000007203csde110085.214ENSIPUG00000000355csde110085.214Ictalurus_punctatus
ENSSMAG00000007203csde110064.496ENSSTOG00000030994-10064.496Ictidomys_tridecemlineatus
ENSSMAG00000007203csde18965.734ENSSTOG00000032722-9865.734Ictidomys_tridecemlineatus
ENSSMAG00000007203csde19977.061ENSJJAG00000019571Csde110076.900Jaculus_jaculus
ENSSMAG00000007203csde110088.551ENSKMAG00000005685csde110088.606Kryptolebias_marmoratus
ENSSMAG00000007203csde110094.278ENSLBEG00000014770csde110094.278Labrus_bergylta
ENSSMAG00000007203csde110074.217ENSLACG00000018452CSDE19972.146Latimeria_chalumnae
ENSSMAG00000007203csde110083.824ENSLOCG00000010413csde110081.630Lepisosteus_oculatus
ENSSMAG00000007203csde110077.662ENSLAFG00000007150CSDE19677.662Loxodonta_africana
ENSSMAG00000007203csde110078.182ENSMFAG00000003674CSDE110078.182Macaca_fascicularis
ENSSMAG00000007203csde110078.182ENSMMUG00000001974CSDE110078.182Macaca_mulatta
ENSSMAG00000007203csde110078.182ENSMNEG00000045247CSDE19778.182Macaca_nemestrina
ENSSMAG00000007203csde110077.922ENSMLEG00000038673CSDE19974.446Mandrillus_leucophaeus
ENSSMAG00000007203csde110094.661ENSMAMG00000008821csde110094.661Mastacembelus_armatus
ENSSMAG00000007203csde110092.848ENSMZEG00005021675csde110093.117Maylandia_zebra
ENSSMAG00000007203csde110079.610ENSMGAG00000016381CSDE110079.610Meleagris_gallopavo
ENSSMAG00000007203csde19977.061ENSMAUG00000014031Csde110076.900Mesocricetus_auratus
ENSSMAG00000007203csde110078.182ENSMICG00000002050CSDE19975.501Microcebus_murinus
ENSSMAG00000007203csde110077.662ENSMOCG00000018960Csde110077.662Microtus_ochrogaster
ENSSMAG00000007203csde110094.928ENSMMOG00000015075csde110094.928Mola_mola
ENSSMAG00000007203csde110078.756ENSMODG00000004685CSDE110077.073Monodelphis_domestica
ENSSMAG00000007203csde110094.798ENSMALG00000007132csde110094.798Monopterus_albus
ENSSMAG00000007203csde110077.792MGP_CAROLIEiJ_G0025444Csde110091.176Mus_caroli
ENSSMAG00000007203csde110077.792ENSMUSG00000068823Csde19991.176Mus_musculus
ENSSMAG00000007203csde110077.792MGP_PahariEiJ_G0026888Csde110091.176Mus_pahari
ENSSMAG00000007203csde110077.792MGP_SPRETEiJ_G0026394Csde110091.176Mus_spretus
ENSSMAG00000007203csde19876.244ENSMPUG00000005753CSDE19976.244Mustela_putorius_furo
ENSSMAG00000007203csde110077.922ENSMLUG00000005681CSDE19477.922Myotis_lucifugus
ENSSMAG00000007203csde19654.000ENSNGAG00000012599-10054.000Nannospalax_galili
ENSSMAG00000007203csde19977.061ENSNGAG00000021929Csde110076.900Nannospalax_galili
ENSSMAG00000007203csde110092.848ENSNBRG00000020808csde110093.117Neolamprologus_brichardi
ENSSMAG00000007203csde110078.182ENSNLEG00000004842CSDE19778.182Nomascus_leucogenys
ENSSMAG00000007203csde19884.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSSMAG00000007203csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSSMAG00000007203csde19977.211ENSODEG00000007383-10077.049Octodon_degus
ENSSMAG00000007203csde19752.759ENSODEG00000005979-9852.759Octodon_degus
ENSSMAG00000007203csde110092.534ENSONIG00000009309csde110092.787Oreochromis_niloticus
ENSSMAG00000007203csde110081.356ENSOANG00000003346-8281.356Ornithorhynchus_anatinus
ENSSMAG00000007203csde110077.792ENSOCUG00000016438CSDE19974.074Oryctolagus_cuniculus
ENSSMAG00000007203csde110092.188ENSORLG00000000707csde110092.188Oryzias_latipes
ENSSMAG00000007203csde110091.789ENSORLG00020005148csde110091.789Oryzias_latipes_hni
ENSSMAG00000007203csde110092.057ENSORLG00015019415csde110092.057Oryzias_latipes_hsok
ENSSMAG00000007203csde110091.667ENSOMEG00000015656csde110091.667Oryzias_melastigma
ENSSMAG00000007203csde110078.312ENSOGAG00000012127CSDE19478.312Otolemur_garnettii
ENSSMAG00000007203csde110077.922ENSOARG00000020034CSDE19477.922Ovis_aries
ENSSMAG00000007203csde110078.182ENSPPAG00000025861CSDE110078.182Pan_paniscus
ENSSMAG00000007203csde110078.442ENSPPRG00000006747CSDE19974.421Panthera_pardus
ENSSMAG00000007203csde110078.442ENSPTIG00000015468CSDE110076.098Panthera_tigris_altaica
ENSSMAG00000007203csde110078.182ENSPTRG00000033721CSDE110075.854Pan_troglodytes
ENSSMAG00000007203csde110078.182ENSPANG00000018873CSDE110078.182Papio_anubis
ENSSMAG00000007203csde110085.938ENSPKIG00000009459csde110085.938Paramormyrops_kingsleyae
ENSSMAG00000007203csde19677.966ENSPSIG00000003823CSDE19975.813Pelodiscus_sinensis
ENSSMAG00000007203csde110089.337ENSPMGG00000000772csde110089.337Periophthalmus_magnuspinnatus
ENSSMAG00000007203csde19977.211ENSPEMG00000020357-10077.198Peromyscus_maniculatus_bairdii
ENSSMAG00000007203csde110077.073ENSPCIG00000022587CSDE110077.073Phascolarctos_cinereus
ENSSMAG00000007203csde19789.736ENSPFOG00000012664csde110090.824Poecilia_formosa
ENSSMAG00000007203csde19584.485ENSPLAG00000017680csde19384.485Poecilia_latipinna
ENSSMAG00000007203csde19584.946ENSPMEG00000005094csde19584.946Poecilia_mexicana
ENSSMAG00000007203csde110089.398ENSPREG00000011631csde110090.000Poecilia_reticulata
ENSSMAG00000007203csde110075.732ENSPPYG00000000996CSDE110075.732Pongo_abelii
ENSSMAG00000007203csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSSMAG00000007203csde110078.442ENSPCOG00000017893CSDE110078.442Propithecus_coquereli
ENSSMAG00000007203csde19069.888ENSPCOG00000008223-9269.888Propithecus_coquereli
ENSSMAG00000007203csde110072.987ENSPVAG00000008225CSDE19572.987Pteropus_vampyrus
ENSSMAG00000007203csde110092.848ENSPNYG00000013745csde110093.117Pundamilia_nyererei
ENSSMAG00000007203csde110087.160ENSPNAG00000001958csde110087.160Pygocentrus_nattereri
ENSSMAG00000007203csde110075.366ENSRNOG00000061058Csde110075.366Rattus_norvegicus
ENSSMAG00000007203csde110073.636ENSRBIG00000038966-9970.093Rhinopithecus_bieti
ENSSMAG00000007203csde110075.227ENSRBIG00000038088-10075.227Rhinopithecus_bieti
ENSSMAG00000007203csde110078.182ENSRROG00000043101CSDE19778.182Rhinopithecus_roxellana
ENSSMAG00000007203csde110078.052ENSSBOG00000035592CSDE19974.562Saimiri_boliviensis_boliviensis
ENSSMAG00000007203csde110079.351ENSSHAG00000009831CSDE110079.351Sarcophilus_harrisii
ENSSMAG00000007203csde110092.857ENSSFOG00015007498csde19392.857Scleropages_formosus
ENSSMAG00000007203csde110096.094ENSSDUG00000015380csde110096.094Seriola_dumerili
ENSSMAG00000007203csde110096.094ENSSLDG00000008819csde110096.094Seriola_lalandi_dorsalis
ENSSMAG00000007203csde110077.792ENSSARG00000000738CSDE19477.792Sorex_araneus
ENSSMAG00000007203csde110079.974ENSSPUG00000008714CSDE110079.974Sphenodon_punctatus
ENSSMAG00000007203csde110094.922ENSSPAG00000000716csde110094.922Stegastes_partitus
ENSSMAG00000007203csde110078.571ENSSSCG00000006752CSDE110078.571Sus_scrofa
ENSSMAG00000007203csde110076.005ENSTGUG00000000972CSDE110076.005Taeniopygia_guttata
ENSSMAG00000007203csde110087.500ENSTRUG00000007996csde110087.500Takifugu_rubripes
ENSSMAG00000007203csde19386.786ENSTNIG00000010878csde110086.786Tetraodon_nigroviridis
ENSSMAG00000007203csde19279.755ENSTBEG00000011880-6576.250Tupaia_belangeri
ENSSMAG00000007203csde110077.662ENSTTRG00000015583CSDE19477.662Tursiops_truncatus
ENSSMAG00000007203csde18773.878ENSUAMG00000024289-9973.878Ursus_americanus
ENSSMAG00000007203csde18981.494ENSUAMG00000021779-9981.090Ursus_americanus
ENSSMAG00000007203csde19474.408ENSUMAG00000011714-9974.408Ursus_maritimus
ENSSMAG00000007203csde110071.818ENSUMAG00000009720-9771.818Ursus_maritimus
ENSSMAG00000007203csde110080.233ENSVPAG00000000749CSDE18476.526Vicugna_pacos
ENSSMAG00000007203csde19374.788ENSVVUG00000009890CSDE19474.788Vulpes_vulpes
ENSSMAG00000007203csde110076.549ENSXETG00000021448csde110076.549Xenopus_tropicalis
ENSSMAG00000007203csde19493.900ENSXCOG00000000035csde19193.900Xiphophorus_couchianus
ENSSMAG00000007203csde110090.499ENSXMAG00000009080csde110091.108Xiphophorus_maculatus

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