EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000007221 (Gene tree)
Gene ID: -
Gene Symbol: ino80
Alias: si:ch211-244p18.3
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 35905 bases
Position: chr20:8385196-8421100
Accession: ZDB-GENE-041014-72
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011946	ResIII	PF04851.15	5.6e-08	1	1
ENSSMAP00000012020	ResIII	PF04851.15	5.6e-08	1	1
ENSSMAP00000012086	ResIII	PF04851.15	7.3e-08	1	1
ENSSMAP00000012179	ResIII	PF04851.15	1.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012174	-	7124	-	ENSSMAP00000012020	1511 (aa)	-	-
ENSSMAT00000012240	-	6660	-	ENSSMAP00000012086	1579 (aa)	-	A0A2U9CTA1
ENSSMAT00000012335	-	4455	-	ENSSMAP00000012179	1484 (aa)	-	-
ENSSMAT00000012101	-	7190	-	ENSSMAP00000011946	1511 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007221's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007221	ino80	100	74.556	ENSG00000128908	INO80	90	82.584	Homo_sapiens
ENSSMAG00000007221	ino80	76	86.320	ENSAPOG00000012586	ino80	99	86.494	Acanthochromis_polyacanthus
ENSSMAG00000007221	ino80	99	72.830	ENSAMEG00000016796	INO80	97	74.144	Ailuropoda_melanoleuca
ENSSMAG00000007221	ino80	96	87.387	ENSACIG00000001918	ino80	96	87.387	Amphilophus_citrinellus
ENSSMAG00000007221	ino80	99	91.964	ENSAOCG00000000490	ino80	99	91.964	Amphiprion_ocellaris
ENSSMAG00000007221	ino80	99	92.028	ENSAPEG00000022911	ino80	99	92.028	Amphiprion_percula
ENSSMAG00000007221	ino80	99	92.156	ENSATEG00000001271	ino80	99	92.156	Anabas_testudineus
ENSSMAG00000007221	ino80	100	75.246	ENSAPLG00000013656	INO80	97	74.549	Anas_platyrhynchos
ENSSMAG00000007221	ino80	95	73.214	ENSACAG00000003531	INO80	99	73.393	Anolis_carolinensis
ENSSMAG00000007221	ino80	98	73.843	ENSANAG00000032223	INO80	97	73.582	Aotus_nancymaae
ENSSMAG00000007221	ino80	96	85.615	ENSACLG00000006610	ino80	96	85.902	Astatotilapia_calliptera
ENSSMAG00000007221	ino80	99	72.160	ENSBTAG00000010380	INO80	97	73.393	Bos_taurus
ENSSMAG00000007221	ino80	98	73.960	ENSCJAG00000020770	-	97	73.630	Callithrix_jacchus
ENSSMAG00000007221	ino80	99	72.687	ENSCAFG00000009492	INO80	97	74.062	Canis_familiaris
ENSSMAG00000007221	ino80	73	70.740	ENSCAFG00020005524	-	98	70.919	Canis_lupus_dingo
ENSSMAG00000007221	ino80	99	72.386	ENSCHIG00000010246	INO80	97	73.501	Capra_hircus
ENSSMAG00000007221	ino80	99	72.991	ENSTSYG00000003252	INO80	97	73.888	Carlito_syrichta
ENSSMAG00000007221	ino80	99	72.819	ENSCPOG00000011386	INO80	97	73.871	Cavia_porcellus
ENSSMAG00000007221	ino80	100	74.101	ENSCCAG00000030680	INO80	97	73.410	Cebus_capucinus
ENSSMAG00000007221	ino80	100	72.630	ENSCATG00000040663	INO80	97	73.677	Cercocebus_atys
ENSSMAG00000007221	ino80	99	73.094	ENSCLAG00000008397	INO80	97	74.141	Chinchilla_lanigera
ENSSMAG00000007221	ino80	100	72.756	ENSCSAG00000007632	INO80	97	73.806	Chlorocebus_sabaeus
ENSSMAG00000007221	ino80	66	74.926	ENSCHOG00000011938	INO80	77	74.926	Choloepus_hoffmanni
ENSSMAG00000007221	ino80	100	75.115	ENSCPBG00000013491	INO80	97	74.485	Chrysemys_picta_bellii
ENSSMAG00000007221	ino80	100	68.153	ENSCANG00000036208	INO80	97	69.290	Colobus_angolensis_palliatus
ENSSMAG00000007221	ino80	99	72.585	ENSCGRG00001013566	Ino80	97	73.888	Cricetulus_griseus_chok1gshd
ENSSMAG00000007221	ino80	99	72.585	ENSCGRG00000001290	Ino80	97	73.888	Cricetulus_griseus_crigri
ENSSMAG00000007221	ino80	96	84.838	ENSCSEG00000019370	ino80	96	84.838	Cynoglossus_semilaevis
ENSSMAG00000007221	ino80	98	87.597	ENSCVAG00000021470	ino80	99	87.309	Cyprinodon_variegatus
ENSSMAG00000007221	ino80	100	79.232	ENSDARG00000070432	ino80	98	79.242	Danio_rerio
ENSSMAG00000007221	ino80	99	72.961	ENSDNOG00000010267	INO80	97	74.017	Dasypus_novemcinctus
ENSSMAG00000007221	ino80	65	63.626	ENSEBUG00000001921	ino80	82	71.614	Eptatretus_burgeri
ENSSMAG00000007221	ino80	99	72.574	ENSEASG00005016405	INO80	97	73.793	Equus_asinus_asinus
ENSSMAG00000007221	ino80	95	79.002	ENSELUG00000001071	ino80	93	79.224	Esox_lucius
ENSSMAG00000007221	ino80	99	72.693	ENSFCAG00000014722	INO80	97	74.079	Felis_catus
ENSSMAG00000007221	ino80	97	74.575	ENSFALG00000006125	INO80	97	73.823	Ficedula_albicollis
ENSSMAG00000007221	ino80	99	72.693	ENSFDAG00000005624	INO80	97	73.711	Fukomys_damarensis
ENSSMAG00000007221	ino80	63	87.616	ENSFHEG00000020436	ino80	88	87.153	Fundulus_heteroclitus
ENSSMAG00000007221	ino80	91	83.500	ENSGMOG00000006031	ino80	99	83.500	Gadus_morhua
ENSSMAG00000007221	ino80	98	74.497	ENSGALG00000008553	INO80	97	74.227	Gallus_gallus
ENSSMAG00000007221	ino80	100	88.418	ENSGAFG00000006358	ino80	99	87.452	Gambusia_affinis
ENSSMAG00000007221	ino80	99	88.944	ENSGACG00000012960	ino80	99	88.944	Gasterosteus_aculeatus
ENSSMAG00000007221	ino80	100	74.721	ENSGAGG00000019203	INO80	94	74.382	Gopherus_agassizii
ENSSMAG00000007221	ino80	98	88.604	ENSHBUG00000022614	ino80	96	88.621	Haplochromis_burtoni
ENSSMAG00000007221	ino80	99	72.859	ENSHGLG00000018136	INO80	97	73.694	Heterocephalus_glaber_female
ENSSMAG00000007221	ino80	99	72.292	ENSHGLG00100006571	INO80	97	72.856	Heterocephalus_glaber_male
ENSSMAG00000007221	ino80	99	85.551	ENSHCOG00000002445	ino80	99	86.026	Hippocampus_comes
ENSSMAG00000007221	ino80	98	79.357	ENSIPUG00000018905	ino80	95	80.782	Ictalurus_punctatus
ENSSMAG00000007221	ino80	99	72.978	ENSSTOG00000000427	INO80	97	73.905	Ictidomys_tridecemlineatus
ENSSMAG00000007221	ino80	99	68.348	ENSJJAG00000016166	Ino80	97	69.345	Jaculus_jaculus
ENSSMAG00000007221	ino80	96	84.152	ENSKMAG00000019273	ino80	94	84.303	Kryptolebias_marmoratus
ENSSMAG00000007221	ino80	96	88.483	ENSLBEG00000024288	ino80	95	88.483	Labrus_bergylta
ENSSMAG00000007221	ino80	100	68.689	ENSLACG00000008666	INO80	99	66.899	Latimeria_chalumnae
ENSSMAG00000007221	ino80	99	79.024	ENSLOCG00000012304	ino80	97	79.550	Lepisosteus_oculatus
ENSSMAG00000007221	ino80	99	74.622	ENSLAFG00000009951	INO80	97	73.806	Loxodonta_africana
ENSSMAG00000007221	ino80	100	72.756	ENSMFAG00000044488	INO80	97	73.806	Macaca_fascicularis
ENSSMAG00000007221	ino80	100	72.756	ENSMMUG00000001737	INO80	97	73.806	Macaca_mulatta
ENSSMAG00000007221	ino80	100	72.819	ENSMNEG00000034906	INO80	97	73.871	Macaca_nemestrina
ENSSMAG00000007221	ino80	100	72.756	ENSMLEG00000042117	INO80	97	73.806	Mandrillus_leucophaeus
ENSSMAG00000007221	ino80	74	78.451	ENSMAMG00000013786	ino80	99	78.362	Mastacembelus_armatus
ENSSMAG00000007221	ino80	96	88.820	ENSMZEG00005013146	ino80	96	89.034	Maylandia_zebra
ENSSMAG00000007221	ino80	88	74.888	ENSMGAG00000011164	INO80	99	74.963	Meleagris_gallopavo
ENSSMAG00000007221	ino80	99	73.062	ENSMAUG00000020670	Ino80	97	72.727	Mesocricetus_auratus
ENSSMAG00000007221	ino80	99	72.418	ENSMICG00000005801	INO80	97	73.463	Microcebus_murinus
ENSSMAG00000007221	ino80	99	73.044	ENSMOCG00000016879	Ino80	97	73.888	Microtus_ochrogaster
ENSSMAG00000007221	ino80	74	78.514	ENSMMOG00000015046	ino80	99	78.424	Mola_mola
ENSSMAG00000007221	ino80	99	73.053	ENSMODG00000000184	INO80	98	73.580	Monodelphis_domestica
ENSSMAG00000007221	ino80	95	85.495	ENSMALG00000016488	ino80	94	85.565	Monopterus_albus
ENSSMAG00000007221	ino80	99	70.364	MGP_CAROLIEiJ_G0024144	Ino80	97	71.835	Mus_caroli
ENSSMAG00000007221	ino80	99	72.271	ENSMUSG00000034154	Ino80	97	73.823	Mus_musculus
ENSSMAG00000007221	ino80	99	72.481	MGP_PahariEiJ_G0025587	Ino80	97	73.916	Mus_pahari
ENSSMAG00000007221	ino80	99	72.208	MGP_SPRETEiJ_G0025060	Ino80	97	73.759	Mus_spretus
ENSSMAG00000007221	ino80	99	72.893	ENSMPUG00000008786	INO80	97	74.208	Mustela_putorius_furo
ENSSMAG00000007221	ino80	99	74.151	ENSMLUG00000017764	INO80	97	73.397	Myotis_lucifugus
ENSSMAG00000007221	ino80	99	74.164	ENSNGAG00000019497	Ino80	97	73.488	Nannospalax_galili
ENSSMAG00000007221	ino80	95	82.497	ENSNBRG00000022086	ino80	95	82.787	Neolamprologus_brichardi
ENSSMAG00000007221	ino80	100	71.097	ENSNLEG00000003454	INO80	97	72.129	Nomascus_leucogenys
ENSSMAG00000007221	ino80	73	68.519	ENSOPRG00000000831	INO80	75	67.442	Ochotona_princeps
ENSSMAG00000007221	ino80	99	74.604	ENSODEG00000016734	INO80	97	73.964	Octodon_degus
ENSSMAG00000007221	ino80	99	91.454	ENSONIG00000000772	ino80	99	91.454	Oreochromis_niloticus
ENSSMAG00000007221	ino80	99	72.978	ENSOCUG00000010763	INO80	98	73.423	Oryctolagus_cuniculus
ENSSMAG00000007221	ino80	99	83.777	ENSORLG00000018028	ino80	99	84.556	Oryzias_latipes
ENSSMAG00000007221	ino80	99	83.777	ENSORLG00015012507	ino80	99	84.556	Oryzias_latipes_hsok
ENSSMAG00000007221	ino80	99	84.781	ENSOMEG00000003791	ino80	99	85.273	Oryzias_melastigma
ENSSMAG00000007221	ino80	99	73.157	ENSOGAG00000008998	INO80	97	74.288	Otolemur_garnettii
ENSSMAG00000007221	ino80	99	73.643	ENSOARG00000020323	INO80	97	73.248	Ovis_aries
ENSSMAG00000007221	ino80	100	72.881	ENSPPAG00000042104	INO80	97	73.871	Pan_paniscus
ENSSMAG00000007221	ino80	99	72.704	ENSPPRG00000011011	INO80	97	73.950	Panthera_pardus
ENSSMAG00000007221	ino80	99	72.453	ENSPTIG00000005911	INO80	97	73.691	Panthera_tigris_altaica
ENSSMAG00000007221	ino80	100	74.622	ENSPTRG00000006939	INO80	97	73.871	Pan_troglodytes
ENSSMAG00000007221	ino80	100	72.756	ENSPANG00000019131	INO80	97	73.806	Papio_anubis
ENSSMAG00000007221	ino80	95	79.332	ENSPKIG00000021450	ino80	99	79.205	Paramormyrops_kingsleyae
ENSSMAG00000007221	ino80	99	75.216	ENSPSIG00000014403	INO80	96	74.772	Pelodiscus_sinensis
ENSSMAG00000007221	ino80	76	70.744	ENSPEMG00000013114	-	99	70.915	Peromyscus_maniculatus_bairdii
ENSSMAG00000007221	ino80	99	73.178	ENSPCIG00000027848	INO80	98	73.644	Phascolarctos_cinereus
ENSSMAG00000007221	ino80	98	86.631	ENSPFOG00000013082	ino80	99	86.123	Poecilia_formosa
ENSSMAG00000007221	ino80	63	84.355	ENSPMEG00000021422	ino80	86	85.605	Poecilia_mexicana
ENSSMAG00000007221	ino80	98	86.207	ENSPREG00000013650	ino80	94	86.518	Poecilia_reticulata
ENSSMAG00000007221	ino80	97	72.339	ENSPPYG00000006368	INO80	97	72.135	Pongo_abelii
ENSSMAG00000007221	ino80	99	71.582	ENSPCOG00000022332	INO80	97	72.474	Propithecus_coquereli
ENSSMAG00000007221	ino80	97	71.957	ENSPVAG00000001852	INO80	97	71.835	Pteropus_vampyrus
ENSSMAG00000007221	ino80	96	85.062	ENSPNYG00000002995	ino80	95	85.886	Pundamilia_nyererei
ENSSMAG00000007221	ino80	100	81.395	ENSPNAG00000010386	ino80	98	81.198	Pygocentrus_nattereri
ENSSMAG00000007221	ino80	99	71.832	ENSRNOG00000014483	Ino80	97	73.372	Rattus_norvegicus
ENSSMAG00000007221	ino80	100	72.819	ENSRBIG00000031765	INO80	97	73.871	Rhinopithecus_bieti
ENSSMAG00000007221	ino80	100	72.819	ENSRROG00000033143	INO80	97	73.871	Rhinopithecus_roxellana
ENSSMAG00000007221	ino80	97	73.864	ENSSBOG00000023493	INO80	97	75.440	Saimiri_boliviensis_boliviensis
ENSSMAG00000007221	ino80	99	72.927	ENSSHAG00000016349	INO80	98	73.452	Sarcophilus_harrisii
ENSSMAG00000007221	ino80	97	79.585	ENSSFOG00015000183	ino80	99	79.520	Scleropages_formosus
ENSSMAG00000007221	ino80	99	94.707	ENSSDUG00000009957	ino80	99	94.707	Seriola_dumerili
ENSSMAG00000007221	ino80	99	92.097	ENSSLDG00000000389	ino80	83	94.922	Seriola_lalandi_dorsalis
ENSSMAG00000007221	ino80	97	71.534	ENSSARG00000007876	INO80	97	71.429	Sorex_araneus
ENSSMAG00000007221	ino80	96	85.823	ENSSPAG00000007779	ino80	94	85.754	Stegastes_partitus
ENSSMAG00000007221	ino80	99	71.973	ENSSSCG00000004753	INO80	98	73.504	Sus_scrofa
ENSSMAG00000007221	ino80	100	72.556	ENSTGUG00000010786	INO80	97	73.582	Taeniopygia_guttata
ENSSMAG00000007221	ino80	98	88.168	ENSTRUG00000013026	ino80	95	88.036	Takifugu_rubripes
ENSSMAG00000007221	ino80	99	73.158	ENSTTRG00000011479	INO80	98	71.857	Tursiops_truncatus
ENSSMAG00000007221	ino80	76	70.876	ENSUMAG00000012190	-	99	71.048	Ursus_maritimus
ENSSMAG00000007221	ino80	99	67.462	ENSVPAG00000002838	INO80	97	68.085	Vicugna_pacos
ENSSMAG00000007221	ino80	99	72.687	ENSVVUG00000026698	INO80	97	74.127	Vulpes_vulpes
ENSSMAG00000007221	ino80	99	66.336	ENSXETG00000034272	INO80	97	66.126	Xenopus_tropicalis
ENSSMAG00000007221	ino80	98	86.410	ENSXMAG00000006742	ino80	93	86.449	Xiphophorus_maculatus