EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007258 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 20040 bases
Position: chr14:18967121-18987160
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011749	RNase_Zc3h12a	PF11977.8	1.6e-64	1	1
ENSSMAP00000011763	RNase_Zc3h12a	PF11977.8	1.6e-64	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000011899	-	6764	-	ENSSMAP00000011749	924 (aa)	-	-
ENSSMAT00000011914	-	6982	-	ENSSMAP00000011763	924 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007258	-	99	45.320	ENSSMAG00000007545	-	84	48.339
ENSSMAG00000007258	-	66	64.644	ENSSMAG00000018309	zc3h12b	75	58.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007258	-	94	73.555	ENSAPOG00000001632	-	97	77.363	Acanthochromis_polyacanthus
ENSSMAG00000007258	-	67	55.882	ENSAPOG00000015355	-	77	50.504	Acanthochromis_polyacanthus
ENSSMAG00000007258	-	91	56.667	ENSACIG00000001362	-	82	50.248	Amphilophus_citrinellus
ENSSMAG00000007258	-	99	47.314	ENSAOCG00000003866	-	91	74.409	Amphiprion_ocellaris
ENSSMAG00000007258	-	99	47.004	ENSAPEG00000005727	-	93	64.151	Amphiprion_percula
ENSSMAG00000007258	-	71	49.639	ENSAPEG00000018582	-	99	49.415	Amphiprion_percula
ENSSMAG00000007258	-	99	45.323	ENSATEG00000004134	-	84	49.479	Anabas_testudineus
ENSSMAG00000007258	-	100	72.180	ENSATEG00000002260	-	93	85.768	Anabas_testudineus
ENSSMAG00000007258	-	99	68.844	ENSACLG00000018493	-	100	68.303	Astatotilapia_calliptera
ENSSMAG00000007258	-	99	45.320	ENSACLG00000027924	-	99	45.005	Astatotilapia_calliptera
ENSSMAG00000007258	-	58	63.941	ENSCSEG00000010073	-	79	77.824	Cynoglossus_semilaevis
ENSSMAG00000007258	-	100	66.631	ENSCSEG00000008542	-	100	65.742	Cynoglossus_semilaevis
ENSSMAG00000007258	-	99	44.848	ENSCVAG00000002328	-	99	45.743	Cyprinodon_variegatus
ENSSMAG00000007258	-	99	56.348	ENSELUG00000005470	-	99	56.535	Esox_lucius
ENSSMAG00000007258	-	84	48.044	ENSELUG00000009319	-	96	48.750	Esox_lucius
ENSSMAG00000007258	-	83	48.925	ENSFHEG00000021225	-	85	64.848	Fundulus_heteroclitus
ENSSMAG00000007258	-	71	55.488	ENSGMOG00000017975	-	99	55.335	Gadus_morhua
ENSSMAG00000007258	-	99	43.448	ENSGAFG00000005290	-	85	48.703	Gambusia_affinis
ENSSMAG00000007258	-	71	48.006	ENSGACG00000014201	-	99	47.710	Gasterosteus_aculeatus
ENSSMAG00000007258	-	71	66.159	ENSGACG00000001339	-	100	65.549	Gasterosteus_aculeatus
ENSSMAG00000007258	-	99	45.320	ENSHBUG00000006831	-	99	45.005	Haplochromis_burtoni
ENSSMAG00000007258	-	99	44.526	ENSHCOG00000008878	-	90	51.131	Hippocampus_comes
ENSSMAG00000007258	-	99	45.329	ENSKMAG00000011694	-	99	45.624	Kryptolebias_marmoratus
ENSSMAG00000007258	-	83	49.940	ENSLBEG00000003547	-	82	49.940	Labrus_bergylta
ENSSMAG00000007258	-	83	49.820	ENSLBEG00000012554	-	85	68.125	Labrus_bergylta
ENSSMAG00000007258	-	99	73.482	ENSLBEG00000012710	-	99	72.843	Labrus_bergylta
ENSSMAG00000007258	-	99	45.693	ENSMAMG00000021794	-	84	76.763	Mastacembelus_armatus
ENSSMAG00000007258	-	99	74.920	ENSMAMG00000020372	-	99	75.347	Mastacembelus_armatus
ENSSMAG00000007258	-	99	68.737	ENSMZEG00005019137	-	99	70.663	Maylandia_zebra
ENSSMAG00000007258	-	99	45.294	ENSMZEG00005007718	-	99	45.102	Maylandia_zebra
ENSSMAG00000007258	-	84	49.754	ENSMMOG00000005728	-	85	67.532	Mola_mola
ENSSMAG00000007258	-	99	67.780	ENSMMOG00000019526	-	94	66.488	Mola_mola
ENSSMAG00000007258	-	67	53.963	ENSMALG00000010501	-	99	44.902	Monopterus_albus
ENSSMAG00000007258	-	99	45.605	ENSNBRG00000006978	-	99	45.121	Neolamprologus_brichardi
ENSSMAG00000007258	-	99	67.987	ENSNBRG00000012175	-	100	67.343	Neolamprologus_brichardi
ENSSMAG00000007258	-	99	45.633	ENSONIG00000012268	-	99	51.754	Oreochromis_niloticus
ENSSMAG00000007258	-	87	63.889	ENSORLG00000029243	-	90	63.889	Oryzias_latipes
ENSSMAG00000007258	-	87	63.889	ENSORLG00020017005	-	88	63.889	Oryzias_latipes_hni
ENSSMAG00000007258	-	87	66.667	ENSORLG00015015211	-	92	49.573	Oryzias_latipes_hsok
ENSSMAG00000007258	-	83	49.818	ENSOMEG00000006666	-	83	50.061	Oryzias_melastigma
ENSSMAG00000007258	-	63	64.165	ENSPMGG00000020126	-	72	65.992	Periophthalmus_magnuspinnatus
ENSSMAG00000007258	-	99	43.652	ENSPLAG00000009867	-	99	43.605	Poecilia_latipinna
ENSSMAG00000007258	-	99	43.756	ENSPMEG00000006624	-	99	43.411	Poecilia_mexicana
ENSSMAG00000007258	-	99	61.925	ENSPMEG00000011676	-	99	61.604	Poecilia_mexicana
ENSSMAG00000007258	-	99	43.504	ENSPREG00000010838	-	99	43.938	Poecilia_reticulata
ENSSMAG00000007258	-	98	61.688	ENSPREG00000001607	-	79	82.213	Poecilia_reticulata
ENSSMAG00000007258	-	100	78.209	ENSSDUG00000013237	-	99	83.739	Seriola_dumerili
ENSSMAG00000007258	-	100	83.174	ENSSLDG00000004886	-	100	83.174	Seriola_lalandi_dorsalis
ENSSMAG00000007258	-	99	45.446	ENSSLDG00000012268	-	99	45.062	Seriola_lalandi_dorsalis
ENSSMAG00000007258	-	100	74.149	ENSSPAG00000001850	-	100	74.043	Stegastes_partitus
ENSSMAG00000007258	-	99	46.236	ENSSPAG00000009485	-	99	46.161	Stegastes_partitus
ENSSMAG00000007258	-	99	44.444	ENSTRUG00000022519	-	99	44.184	Takifugu_rubripes
ENSSMAG00000007258	-	72	50.147	ENSTNIG00000014519	-	96	73.282	Tetraodon_nigroviridis
ENSSMAG00000007258	-	99	60.021	ENSXMAG00000014715	-	97	82.789	Xiphophorus_maculatus
ENSSMAG00000007258	-	99	44.314	ENSXMAG00000027171	-	87	48.506	Xiphophorus_maculatus