EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007396 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 1893 bases
Position: chr15:21603381-21605273
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	1	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	2	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	3	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	4	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	5	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	6	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	7	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	8	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	9	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	10	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	11	12
ENSSMAP00000011992	zf-C2H2	PF00096.26	2.8e-67	12	12
ENSSMAP00000011992	zf-met	PF12874.7	6.5e-24	1	2
ENSSMAP00000011992	zf-met	PF12874.7	6.5e-24	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012146	-	1632	-	ENSSMAP00000011992	543 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007396's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007396's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007396	-	89	45.946	ENSSMAG00000009609	-	97	51.220
ENSSMAG00000007396	-	81	39.458	ENSSMAG00000015041	si:dkey-7i4.5	88	39.458
ENSSMAG00000007396	-	92	44.300	ENSSMAG00000009685	-	91	44.300
ENSSMAG00000007396	-	81	44.375	ENSSMAG00000015181	gfi1b	66	41.525
ENSSMAG00000007396	-	80	35.465	ENSSMAG00000020844	patz1	73	35.465
ENSSMAG00000007396	-	81	41.579	ENSSMAG00000013291	-	94	41.579
ENSSMAG00000007396	-	80	34.667	ENSSMAG00000008907	zbtb41	60	33.221
ENSSMAG00000007396	-	80	44.848	ENSSMAG00000015356	-	83	39.007
ENSSMAG00000007396	-	92	31.963	ENSSMAG00000014864	-	88	43.956
ENSSMAG00000007396	-	83	39.091	ENSSMAG00000006825	-	88	39.091
ENSSMAG00000007396	-	84	38.462	ENSSMAG00000004429	-	90	38.462
ENSSMAG00000007396	-	78	39.088	ENSSMAG00000017485	-	50	37.126
ENSSMAG00000007396	-	84	37.821	ENSSMAG00000013676	-	95	38.246
ENSSMAG00000007396	-	87	39.834	ENSSMAG00000003594	-	87	39.834
ENSSMAG00000007396	-	79	40.244	ENSSMAG00000006155	-	56	40.244
ENSSMAG00000007396	-	88	37.705	ENSSMAG00000019949	-	62	53.968
ENSSMAG00000007396	-	81	35.616	ENSSMAG00000014597	-	60	35.616
ENSSMAG00000007396	-	71	41.370	ENSSMAG00000015849	znf319b	89	41.370
ENSSMAG00000007396	-	71	37.500	ENSSMAG00000019364	snai2	70	37.500
ENSSMAG00000007396	-	85	42.143	ENSSMAG00000011335	ZBTB14	59	41.259
ENSSMAG00000007396	-	88	37.333	ENSSMAG00000014720	e4f1	61	34.969
ENSSMAG00000007396	-	82	38.889	ENSSMAG00000007561	znf236	79	38.889
ENSSMAG00000007396	-	89	44.737	ENSSMAG00000014844	-	81	45.238
ENSSMAG00000007396	-	85	37.101	ENSSMAG00000004252	-	84	38.576
ENSSMAG00000007396	-	79	32.515	ENSSMAG00000000404	-	86	32.500
ENSSMAG00000007396	-	79	44.785	ENSSMAG00000021251	-	97	39.401
ENSSMAG00000007396	-	95	31.797	ENSSMAG00000005081	-	81	35.526
ENSSMAG00000007396	-	84	40.720	ENSSMAG00000002391	ZNF319	91	40.720
ENSSMAG00000007396	-	82	32.990	ENSSMAG00000001359	-	91	32.990
ENSSMAG00000007396	-	80	36.339	ENSSMAG00000009020	znf526	59	36.885
ENSSMAG00000007396	-	80	34.000	ENSSMAG00000018844	prdm5	76	33.333
ENSSMAG00000007396	-	93	41.518	ENSSMAG00000009115	-	91	58.333
ENSSMAG00000007396	-	78	40.090	ENSSMAG00000017045	-	54	40.090
ENSSMAG00000007396	-	71	50.000	ENSSMAG00000009679	-	80	50.000
ENSSMAG00000007396	-	72	42.169	ENSSMAG00000003204	zgc:171929	69	42.169
ENSSMAG00000007396	-	79	43.269	ENSSMAG00000002798	-	68	43.269
ENSSMAG00000007396	-	83	44.944	ENSSMAG00000005076	-	100	46.957
ENSSMAG00000007396	-	84	34.043	ENSSMAG00000000056	-	52	34.043
ENSSMAG00000007396	-	80	38.095	ENSSMAG00000008834	-	62	38.095
ENSSMAG00000007396	-	87	32.500	ENSSMAG00000021271	-	68	36.000
ENSSMAG00000007396	-	73	48.148	ENSSMAG00000004259	-	59	48.148
ENSSMAG00000007396	-	77	37.762	ENSSMAG00000019207	scrt1b	57	37.762
ENSSMAG00000007396	-	83	37.072	ENSSMAG00000019980	-	70	36.245
ENSSMAG00000007396	-	86	36.667	ENSSMAG00000002031	-	66	36.667
ENSSMAG00000007396	-	98	44.816	ENSSMAG00000015347	-	83	44.816
ENSSMAG00000007396	-	92	44.737	ENSSMAG00000006197	-	99	44.048
ENSSMAG00000007396	-	80	44.079	ENSSMAG00000013828	-	61	44.079
ENSSMAG00000007396	-	93	44.245	ENSSMAG00000013663	-	98	44.565
ENSSMAG00000007396	-	81	38.994	ENSSMAG00000015282	-	79	37.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007396	-	84	37.818	ENSATEG00000010859	-	97	37.818	Anabas_testudineus
ENSSMAG00000007396	-	81	43.533	ENSAMXG00000013274	-	93	43.533	Astyanax_mexicanus
ENSSMAG00000007396	-	84	43.925	ENSAMXG00000039700	-	95	43.925	Astyanax_mexicanus
ENSSMAG00000007396	-	80	38.747	ENSAMXG00000029960	-	95	38.747	Astyanax_mexicanus
ENSSMAG00000007396	-	83	43.767	ENSAMXG00000039432	-	95	43.767	Astyanax_mexicanus
ENSSMAG00000007396	-	81	40.113	ENSAMXG00000042633	-	92	40.789	Astyanax_mexicanus
ENSSMAG00000007396	-	83	43.119	ENSAMXG00000039977	-	90	42.286	Astyanax_mexicanus
ENSSMAG00000007396	-	83	43.681	ENSAMXG00000031794	-	98	43.681	Astyanax_mexicanus
ENSSMAG00000007396	-	86	41.967	ENSAMXG00000042593	-	94	41.967	Astyanax_mexicanus
ENSSMAG00000007396	-	78	44.390	ENSCPBG00000009849	-	89	44.390	Chrysemys_picta_bellii
ENSSMAG00000007396	-	96	39.545	ENSELUG00000009575	-	99	42.222	Esox_lucius
ENSSMAG00000007396	-	79	42.466	ENSIPUG00000015121	-	73	42.466	Ictalurus_punctatus
ENSSMAG00000007396	-	80	45.098	ENSKMAG00000000543	-	95	37.629	Kryptolebias_marmoratus
ENSSMAG00000007396	-	80	37.845	ENSMAMG00000016519	-	98	36.300	Mastacembelus_armatus
ENSSMAG00000007396	-	87	44.089	ENSMZEG00005020574	-	90	44.089	Maylandia_zebra
ENSSMAG00000007396	-	84	64.151	ENSONIG00000007088	-	100	64.151	Oreochromis_niloticus
ENSSMAG00000007396	-	80	43.151	ENSPSIG00000000075	-	83	43.151	Pelodiscus_sinensis
ENSSMAG00000007396	-	87	42.604	ENSPNAG00000012215	-	93	42.604	Pygocentrus_nattereri
ENSSMAG00000007396	-	81	44.118	ENSPNAG00000008480	-	96	41.088	Pygocentrus_nattereri
ENSSMAG00000007396	-	72	41.346	ENSTBEG00000012287	-	99	41.346	Tupaia_belangeri