EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007468 (Gene tree)
Gene ID: -
Gene Symbol: larp1
Alias: wu:fb92d03|wu:fd15e07
Full Name: La ribonucleoprotein domain family%2C member 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 38643 bases
Position: chr4:9919942-9958584
Accession: ZDB-GENE-030131-5386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012157	La	PF05383.17	1.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012312	-	2988	-	ENSSMAP00000012157	995 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007468	larp1	85	53.070	ENSSMAG00000006347	larp1b	88	53.786

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007468	larp1	84	67.450	ENSG00000155506	LARP1	90	80.000	Homo_sapiens
ENSSMAG00000007468	larp1	87	98.333	ENSAPOG00000020685	larp1	94	98.333	Acanthochromis_polyacanthus
ENSSMAG00000007468	larp1	84	67.929	ENSAMEG00000016673	LARP1	93	67.821	Ailuropoda_melanoleuca
ENSSMAG00000007468	larp1	98	82.762	ENSACIG00000012994	larp1	93	81.855	Amphilophus_citrinellus
ENSSMAG00000007468	larp1	74	90.244	ENSAOCG00000007792	larp1	93	88.447	Amphiprion_ocellaris
ENSSMAG00000007468	larp1	98	88.351	ENSAPEG00000022246	larp1	94	86.476	Amphiprion_percula
ENSSMAG00000007468	larp1	98	85.657	ENSATEG00000013523	larp1	93	86.441	Anabas_testudineus
ENSSMAG00000007468	larp1	84	72.943	ENSAPLG00000007559	LARP1	99	70.913	Anas_platyrhynchos
ENSSMAG00000007468	larp1	84	71.840	ENSACAG00000004071	LARP1	90	74.410	Anolis_carolinensis
ENSSMAG00000007468	larp1	88	64.856	ENSANAG00000029949	LARP1	93	67.406	Aotus_nancymaae
ENSSMAG00000007468	larp1	98	85.728	ENSACLG00000015256	larp1	93	85.728	Astatotilapia_calliptera
ENSSMAG00000007468	larp1	98	76.598	ENSAMXG00000000859	larp1	95	76.205	Astyanax_mexicanus
ENSSMAG00000007468	larp1	98	62.871	ENSBTAG00000008443	LARP1	94	62.464	Bos_taurus
ENSSMAG00000007468	larp1	98	62.072	ENSCJAG00000004454	LARP1	94	62.235	Callithrix_jacchus
ENSSMAG00000007468	larp1	84	67.929	ENSCAFG00000017639	LARP1	93	67.821	Canis_familiaris
ENSSMAG00000007468	larp1	78	69.649	ENSCAFG00020023860	LARP1	91	69.539	Canis_lupus_dingo
ENSSMAG00000007468	larp1	98	64.547	ENSCHIG00000014414	LARP1	94	62.102	Capra_hircus
ENSSMAG00000007468	larp1	84	67.670	ENSTSYG00000013732	LARP1	92	66.816	Carlito_syrichta
ENSSMAG00000007468	larp1	80	66.509	ENSCAPG00000013865	LARP1	86	66.390	Cavia_aperea
ENSSMAG00000007468	larp1	84	67.857	ENSCPOG00000003377	LARP1	93	67.749	Cavia_porcellus
ENSSMAG00000007468	larp1	98	61.977	ENSCCAG00000025201	LARP1	94	62.235	Cebus_capucinus
ENSSMAG00000007468	larp1	98	61.923	ENSCATG00000030675	LARP1	94	61.680	Cercocebus_atys
ENSSMAG00000007468	larp1	84	67.749	ENSCLAG00000012755	LARP1	92	67.749	Chinchilla_lanigera
ENSSMAG00000007468	larp1	78	68.537	ENSCSAG00000010800	LARP1	91	68.537	Chlorocebus_sabaeus
ENSSMAG00000007468	larp1	81	66.559	ENSCHOG00000012716	LARP1	85	66.559	Choloepus_hoffmanni
ENSSMAG00000007468	larp1	88	73.103	ENSCPBG00000002173	LARP1	86	73.403	Chrysemys_picta_bellii
ENSSMAG00000007468	larp1	88	65.273	ENSCANG00000037418	LARP1	90	65.161	Colobus_angolensis_palliatus
ENSSMAG00000007468	larp1	98	63.285	ENSCGRG00001016913	Larp1	94	63.178	Cricetulus_griseus_chok1gshd
ENSSMAG00000007468	larp1	84	65.692	ENSCGRG00000009916	Larp1	96	65.724	Cricetulus_griseus_crigri
ENSSMAG00000007468	larp1	98	83.972	ENSCSEG00000016431	larp1	94	83.104	Cynoglossus_semilaevis
ENSSMAG00000007468	larp1	98	84.486	ENSCVAG00000022687	larp1	93	84.289	Cyprinodon_variegatus
ENSSMAG00000007468	larp1	98	69.324	ENSDARG00000101722	larp1	90	76.094	Danio_rerio
ENSSMAG00000007468	larp1	98	62.214	ENSDNOG00000012073	LARP1	94	61.983	Dasypus_novemcinctus
ENSSMAG00000007468	larp1	84	67.583	ENSDORG00000002897	Larp1	91	66.779	Dipodomys_ordii
ENSSMAG00000007468	larp1	84	67.937	ENSETEG00000020251	LARP1	100	67.829	Echinops_telfairi
ENSSMAG00000007468	larp1	98	62.560	ENSEASG00005001070	LARP1	94	62.248	Equus_asinus_asinus
ENSSMAG00000007468	larp1	98	62.560	ENSECAG00000017002	LARP1	78	62.248	Equus_caballus
ENSSMAG00000007468	larp1	82	66.782	ENSEEUG00000001065	LARP1	93	66.897	Erinaceus_europaeus
ENSSMAG00000007468	larp1	98	77.595	ENSELUG00000019403	larp1	95	76.534	Esox_lucius
ENSSMAG00000007468	larp1	98	62.691	ENSFCAG00000000592	LARP1	94	62.476	Felis_catus
ENSSMAG00000007468	larp1	74	76.831	ENSFALG00000008335	LARP1	91	76.298	Ficedula_albicollis
ENSSMAG00000007468	larp1	84	67.821	ENSFDAG00000021125	LARP1	93	67.713	Fukomys_damarensis
ENSSMAG00000007468	larp1	65	81.487	ENSFHEG00000020307	larp1	97	80.967	Fundulus_heteroclitus
ENSSMAG00000007468	larp1	98	69.261	ENSGALG00000040109	LARP1	90	75.342	Gallus_gallus
ENSSMAG00000007468	larp1	98	68.281	ENSGAGG00000025113	LARP1	90	74.690	Gopherus_agassizii
ENSSMAG00000007468	larp1	86	66.593	ENSGGOG00000006048	LARP1	88	66.483	Gorilla_gorilla
ENSSMAG00000007468	larp1	98	87.917	ENSHBUG00000020762	larp1	93	86.640	Haplochromis_burtoni
ENSSMAG00000007468	larp1	98	61.818	ENSHGLG00000006267	LARP1	94	61.471	Heterocephalus_glaber_female
ENSSMAG00000007468	larp1	88	58.026	ENSHGLG00100003395	-	84	58.224	Heterocephalus_glaber_male
ENSSMAG00000007468	larp1	84	67.411	ENSHGLG00100014230	-	93	67.301	Heterocephalus_glaber_male
ENSSMAG00000007468	larp1	91	95.304	ENSHCOG00000010786	larp1	93	95.304	Hippocampus_comes
ENSSMAG00000007468	larp1	88	79.306	ENSIPUG00000019105	Larp1	91	78.971	Ictalurus_punctatus
ENSSMAG00000007468	larp1	84	67.116	ENSSTOG00000005678	LARP1	92	67.116	Ictidomys_tridecemlineatus
ENSSMAG00000007468	larp1	98	59.473	ENSJJAG00000016950	Larp1	87	62.879	Jaculus_jaculus
ENSSMAG00000007468	larp1	98	83.728	ENSKMAG00000018468	larp1	92	84.573	Kryptolebias_marmoratus
ENSSMAG00000007468	larp1	98	87.074	ENSLBEG00000027172	larp1	93	85.772	Labrus_bergylta
ENSSMAG00000007468	larp1	98	76.985	ENSLOCG00000012457	larp1	95	81.313	Lepisosteus_oculatus
ENSSMAG00000007468	larp1	98	62.102	ENSLAFG00000008991	LARP1	94	61.702	Loxodonta_africana
ENSSMAG00000007468	larp1	88	65.166	ENSMFAG00000031651	LARP1	90	65.054	Macaca_fascicularis
ENSSMAG00000007468	larp1	84	66.592	ENSMMUG00000009411	LARP1	92	66.592	Macaca_mulatta
ENSSMAG00000007468	larp1	79	68.496	ENSMNEG00000039294	LARP1	91	68.978	Macaca_nemestrina
ENSSMAG00000007468	larp1	84	67.634	ENSMLEG00000035142	LARP1	90	65.269	Mandrillus_leucophaeus
ENSSMAG00000007468	larp1	98	85.907	ENSMAMG00000021788	larp1	94	84.459	Mastacembelus_armatus
ENSSMAG00000007468	larp1	98	85.728	ENSMZEG00005009345	larp1	93	85.728	Maylandia_zebra
ENSSMAG00000007468	larp1	84	73.708	ENSMGAG00000005696	LARP1	93	73.708	Meleagris_gallopavo
ENSSMAG00000007468	larp1	98	62.995	ENSMAUG00000001385	Larp1	94	62.888	Mesocricetus_auratus
ENSSMAG00000007468	larp1	86	67.473	ENSMICG00000000837	LARP1	91	69.539	Microcebus_murinus
ENSSMAG00000007468	larp1	98	63.092	ENSMOCG00000008920	Larp1	94	62.984	Microtus_ochrogaster
ENSSMAG00000007468	larp1	98	68.060	ENSMMOG00000013364	larp1	95	68.358	Mola_mola
ENSSMAG00000007468	larp1	84	71.091	ENSMODG00000008663	LARP1	92	69.179	Monodelphis_domestica
ENSSMAG00000007468	larp1	98	83.656	ENSMALG00000017180	larp1	93	82.205	Monopterus_albus
ENSSMAG00000007468	larp1	98	63.382	MGP_CAROLIEiJ_G0016383	Larp1	94	63.275	Mus_caroli
ENSSMAG00000007468	larp1	98	63.478	ENSMUSG00000037331	Larp1	94	63.372	Mus_musculus
ENSSMAG00000007468	larp1	98	63.224	MGP_PahariEiJ_G0017518	Larp1	94	63.117	Mus_pahari
ENSSMAG00000007468	larp1	98	63.478	MGP_SPRETEiJ_G0017225	Larp1	94	63.372	Mus_spretus
ENSSMAG00000007468	larp1	85	58.658	ENSMPUG00000013564	LARP1	99	58.315	Mustela_putorius_furo
ENSSMAG00000007468	larp1	84	64.523	ENSMLUG00000002608	LARP1	93	64.627	Myotis_lucifugus
ENSSMAG00000007468	larp1	84	67.657	ENSNGAG00000001098	Larp1	92	66.555	Nannospalax_galili
ENSSMAG00000007468	larp1	91	91.338	ENSNBRG00000008963	larp1	94	90.022	Neolamprologus_brichardi
ENSSMAG00000007468	larp1	84	68.516	ENSNLEG00000016588	LARP1	92	67.010	Nomascus_leucogenys
ENSSMAG00000007468	larp1	84	65.792	ENSMEUG00000002957	LARP1	93	65.792	Notamacropus_eugenii
ENSSMAG00000007468	larp1	84	67.634	ENSOPRG00000013014	LARP1	93	67.525	Ochotona_princeps
ENSSMAG00000007468	larp1	85	66.923	ENSODEG00000010824	LARP1	93	67.637	Octodon_degus
ENSSMAG00000007468	larp1	98	87.197	ENSONIG00000017308	larp1	94	86.033	Oreochromis_niloticus
ENSSMAG00000007468	larp1	87	70.486	ENSOANG00000005096	LARP1	93	68.757	Ornithorhynchus_anatinus
ENSSMAG00000007468	larp1	98	62.909	ENSOCUG00000013066	LARP1	94	62.633	Oryctolagus_cuniculus
ENSSMAG00000007468	larp1	98	82.905	ENSORLG00000000824	larp1	92	84.625	Oryzias_latipes
ENSSMAG00000007468	larp1	98	82.905	ENSORLG00020022241	larp1	94	81.719	Oryzias_latipes_hni
ENSSMAG00000007468	larp1	98	83.086	ENSORLG00015007538	larp1	94	83.086	Oryzias_latipes_hsok
ENSSMAG00000007468	larp1	98	82.987	ENSOMEG00000003134	larp1	94	83.086	Oryzias_melastigma
ENSSMAG00000007468	larp1	84	67.634	ENSOGAG00000016750	LARP1	93	67.525	Otolemur_garnettii
ENSSMAG00000007468	larp1	84	68.126	ENSOARG00000009893	LARP1	93	67.901	Ovis_aries
ENSSMAG00000007468	larp1	84	67.450	ENSPPAG00000042993	LARP1	87	67.340	Pan_paniscus
ENSSMAG00000007468	larp1	84	68.345	ENSPPRG00000009780	LARP1	87	68.121	Panthera_pardus
ENSSMAG00000007468	larp1	84	68.533	ENSPTIG00000007013	LARP1	87	68.533	Panthera_tigris_altaica
ENSSMAG00000007468	larp1	98	61.148	ENSPTRG00000017447	LARP1	94	61.412	Pan_troglodytes
ENSSMAG00000007468	larp1	98	61.923	ENSPANG00000008080	LARP1	94	61.680	Papio_anubis
ENSSMAG00000007468	larp1	98	68.969	ENSPKIG00000017153	-	99	68.432	Paramormyrops_kingsleyae
ENSSMAG00000007468	larp1	98	78.020	ENSPKIG00000010096	larp1	94	77.151	Paramormyrops_kingsleyae
ENSSMAG00000007468	larp1	98	80.832	ENSPMGG00000011599	larp1	95	86.543	Periophthalmus_magnuspinnatus
ENSSMAG00000007468	larp1	84	67.503	ENSPEMG00000022523	Larp1	92	66.704	Peromyscus_maniculatus_bairdii
ENSSMAG00000007468	larp1	98	66.992	ENSPCIG00000019242	LARP1	87	65.490	Phascolarctos_cinereus
ENSSMAG00000007468	larp1	98	81.220	ENSPFOG00000005836	larp1	93	79.556	Poecilia_formosa
ENSSMAG00000007468	larp1	98	81.845	ENSPLAG00000008936	larp1	93	82.708	Poecilia_latipinna
ENSSMAG00000007468	larp1	98	80.929	ENSPMEG00000013656	larp1	93	79.364	Poecilia_mexicana
ENSSMAG00000007468	larp1	84	83.482	ENSPREG00000005726	larp1	92	82.143	Poecilia_reticulata
ENSSMAG00000007468	larp1	84	66.330	ENSPCAG00000006407	LARP1	93	66.216	Procavia_capensis
ENSSMAG00000007468	larp1	84	60.045	ENSPCOG00000016949	LARP1	92	62.934	Propithecus_coquereli
ENSSMAG00000007468	larp1	98	62.059	ENSPVAG00000002262	LARP1	94	62.141	Pteropus_vampyrus
ENSSMAG00000007468	larp1	98	85.924	ENSPNYG00000007938	larp1	93	86.022	Pundamilia_nyererei
ENSSMAG00000007468	larp1	98	76.754	ENSPNAG00000021427	larp1	88	82.444	Pygocentrus_nattereri
ENSSMAG00000007468	larp1	84	67.771	ENSRNOG00000031544	Larp1	92	66.965	Rattus_norvegicus
ENSSMAG00000007468	larp1	88	65.488	ENSRBIG00000038005	LARP1	90	65.376	Rhinopithecus_bieti
ENSSMAG00000007468	larp1	88	65.488	ENSRROG00000034073	LARP1	91	69.221	Rhinopithecus_roxellana
ENSSMAG00000007468	larp1	86	66.412	ENSSBOG00000019816	LARP1	92	66.667	Saimiri_boliviensis_boliviensis
ENSSMAG00000007468	larp1	84	72.222	ENSSHAG00000011115	LARP1	93	70.295	Sarcophilus_harrisii
ENSSMAG00000007468	larp1	98	75.607	ENSSFOG00015018058	-	94	73.887	Scleropages_formosus
ENSSMAG00000007468	larp1	85	79.581	ENSSFOG00015020304	larp1	90	76.356	Scleropages_formosus
ENSSMAG00000007468	larp1	98	85.728	ENSSDUG00000000268	larp1	93	85.345	Seriola_dumerili
ENSSMAG00000007468	larp1	78	86.550	ENSSLDG00000016505	larp1	91	84.682	Seriola_lalandi_dorsalis
ENSSMAG00000007468	larp1	52	88.837	ENSSARG00000013907	-	78	88.837	Sorex_araneus
ENSSMAG00000007468	larp1	98	65.988	ENSSPUG00000012179	-	93	65.692	Sphenodon_punctatus
ENSSMAG00000007468	larp1	98	86.719	ENSSPAG00000003910	larp1	94	86.523	Stegastes_partitus
ENSSMAG00000007468	larp1	98	62.273	ENSSSCG00000017069	LARP1	92	68.307	Sus_scrofa
ENSSMAG00000007468	larp1	84	72.009	ENSTGUG00000000704	LARP1	96	70.090	Taeniopygia_guttata
ENSSMAG00000007468	larp1	98	87.894	ENSTRUG00000009470	larp1	93	86.165	Takifugu_rubripes
ENSSMAG00000007468	larp1	84	65.922	ENSTBEG00000003381	LARP1	99	65.807	Tupaia_belangeri
ENSSMAG00000007468	larp1	83	67.837	ENSTTRG00000015934	LARP1	93	67.525	Tursiops_truncatus
ENSSMAG00000007468	larp1	98	62.691	ENSUAMG00000019334	LARP1	94	62.380	Ursus_americanus
ENSSMAG00000007468	larp1	84	70.023	ENSUMAG00000002934	LARP1	96	69.942	Ursus_maritimus
ENSSMAG00000007468	larp1	78	69.649	ENSVVUG00000004644	LARP1	91	69.539	Vulpes_vulpes
ENSSMAG00000007468	larp1	88	71.064	ENSXETG00000008413	larp1	91	69.612	Xenopus_tropicalis
ENSSMAG00000007468	larp1	86	86.617	ENSXCOG00000004022	larp1	91	88.136	Xiphophorus_couchianus
ENSSMAG00000007468	larp1	98	80.911	ENSXMAG00000018780	larp1	93	79.344	Xiphophorus_maculatus