EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007545 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 16162 bases
Position: chr1:5573650-5589811
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012218	RNase_Zc3h12a	PF11977.8	6.8e-65	1	1
ENSSMAP00000012227	RNase_Zc3h12a	PF11977.8	6.8e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012384	-	8455	-	ENSSMAP00000012227	958 (aa)	-	-
ENSSMAT00000012375	-	8032	-	ENSSMAP00000012218	958 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007545's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007545's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007545	-	84	48.339	ENSSMAG00000007258	-	99	45.320
ENSSMAG00000007545	-	83	44.765	ENSSMAG00000018309	zc3h12b	71	69.832

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007545	-	80	85.046	ENSAPOG00000015355	-	82	84.525	Acanthochromis_polyacanthus
ENSSMAG00000007545	-	82	49.524	ENSAPOG00000001632	-	87	72.941	Acanthochromis_polyacanthus
ENSSMAG00000007545	-	100	70.938	ENSACIG00000001362	-	97	72.708	Amphilophus_citrinellus
ENSSMAG00000007545	-	99	84.004	ENSAOCG00000003866	-	98	87.407	Amphiprion_ocellaris
ENSSMAG00000007545	-	100	78.229	ENSAPEG00000005727	-	99	87.781	Amphiprion_percula
ENSSMAG00000007545	-	72	82.387	ENSAPEG00000018582	-	99	82.387	Amphiprion_percula
ENSSMAG00000007545	-	100	85.273	ENSATEG00000004134	-	100	85.891	Anabas_testudineus
ENSSMAG00000007545	-	82	46.927	ENSATEG00000002260	-	83	79.149	Anabas_testudineus
ENSSMAG00000007545	-	65	53.555	ENSACLG00000018493	-	99	44.990	Astatotilapia_calliptera
ENSSMAG00000007545	-	100	82.684	ENSACLG00000027924	-	100	83.539	Astatotilapia_calliptera
ENSSMAG00000007545	-	55	53.378	ENSCPBG00000018492	ZC3H12A	61	66.997	Chrysemys_picta_bellii
ENSSMAG00000007545	-	86	81.794	ENSCSEG00000010073	-	96	84.615	Cynoglossus_semilaevis
ENSSMAG00000007545	-	83	48.086	ENSCSEG00000008542	-	99	44.256	Cynoglossus_semilaevis
ENSSMAG00000007545	-	100	76.971	ENSCVAG00000002328	-	100	76.245	Cyprinodon_variegatus
ENSSMAG00000007545	-	84	58.029	ENSELUG00000009319	-	96	57.405	Esox_lucius
ENSSMAG00000007545	-	51	63.043	ENSELUG00000005470	-	90	63.636	Esox_lucius
ENSSMAG00000007545	-	92	85.417	ENSFHEG00000021225	-	84	89.610	Fundulus_heteroclitus
ENSSMAG00000007545	-	71	45.326	ENSGMOG00000017975	-	100	46.198	Gadus_morhua
ENSSMAG00000007545	-	100	74.508	ENSGAFG00000005290	-	100	74.611	Gambusia_affinis
ENSSMAG00000007545	-	71	73.869	ENSGACG00000014201	-	100	74.818	Gasterosteus_aculeatus
ENSSMAG00000007545	-	53	53.670	ENSGAGG00000003881	ZC3H12A	64	59.341	Gopherus_agassizii
ENSSMAG00000007545	-	100	82.582	ENSHBUG00000006831	-	100	83.436	Haplochromis_burtoni
ENSSMAG00000007545	-	100	66.312	ENSHCOG00000008878	-	100	64.836	Hippocampus_comes
ENSSMAG00000007545	-	100	75.439	ENSKMAG00000011694	-	100	76.915	Kryptolebias_marmoratus
ENSSMAG00000007545	-	97	80.423	ENSLBEG00000012554	-	99	86.035	Labrus_bergylta
ENSSMAG00000007545	-	87	47.006	ENSLBEG00000012710	-	99	45.025	Labrus_bergylta
ENSSMAG00000007545	-	100	80.671	ENSLBEG00000003547	-	100	80.977	Labrus_bergylta
ENSSMAG00000007545	-	97	79.424	ENSMAMG00000021794	-	98	88.889	Mastacembelus_armatus
ENSSMAG00000007545	-	99	45.700	ENSMAMG00000020372	-	99	45.862	Mastacembelus_armatus
ENSSMAG00000007545	-	65	53.555	ENSMZEG00005019137	-	90	70.968	Maylandia_zebra
ENSSMAG00000007545	-	100	82.582	ENSMZEG00005007718	-	100	83.436	Maylandia_zebra
ENSSMAG00000007545	-	96	77.391	ENSMMOG00000005728	-	99	83.824	Mola_mola
ENSSMAG00000007545	-	85	48.009	ENSMMOG00000019526	-	93	43.811	Mola_mola
ENSSMAG00000007545	-	100	82.456	ENSMALG00000010501	-	100	82.559	Monopterus_albus
ENSSMAG00000007545	-	100	82.172	ENSNBRG00000006978	-	100	83.128	Neolamprologus_brichardi
ENSSMAG00000007545	-	65	51.817	ENSNBRG00000012175	-	90	70.968	Neolamprologus_brichardi
ENSSMAG00000007545	-	100	82.907	ENSONIG00000012268	-	100	83.762	Oreochromis_niloticus
ENSSMAG00000007545	-	100	65.417	ENSORLG00000029243	-	96	80.601	Oryzias_latipes
ENSSMAG00000007545	-	100	74.089	ENSORLG00020017005	-	100	74.378	Oryzias_latipes_hni
ENSSMAG00000007545	-	100	74.922	ENSORLG00015015211	-	100	75.182	Oryzias_latipes_hsok
ENSSMAG00000007545	-	100	75.417	ENSOMEG00000006666	-	100	75.959	Oryzias_melastigma
ENSSMAG00000007545	-	50	58.158	ENSPSIG00000009198	ZC3H12A	78	61.516	Pelodiscus_sinensis
ENSSMAG00000007545	-	56	58.943	ENSPMGG00000020126	-	50	59.827	Periophthalmus_magnuspinnatus
ENSSMAG00000007545	-	63	79.747	ENSPMGG00000009790	-	96	80.656	Periophthalmus_magnuspinnatus
ENSSMAG00000007545	-	100	75.597	ENSPLAG00000009867	-	100	75.182	Poecilia_latipinna
ENSSMAG00000007545	-	100	76.116	ENSPMEG00000006624	-	100	75.701	Poecilia_mexicana
ENSSMAG00000007545	-	82	47.311	ENSPMEG00000011676	-	83	47.497	Poecilia_mexicana
ENSSMAG00000007545	-	82	47.561	ENSPREG00000001607	-	73	79.386	Poecilia_reticulata
ENSSMAG00000007545	-	100	75.726	ENSPREG00000010838	-	100	75.415	Poecilia_reticulata
ENSSMAG00000007545	-	84	50.833	ENSSDUG00000013237	-	90	64.901	Seriola_dumerili
ENSSMAG00000007545	-	100	87.615	ENSSDUG00000021864	-	100	87.807	Seriola_dumerili
ENSSMAG00000007545	-	100	87.602	ENSSLDG00000012268	-	100	88.012	Seriola_lalandi_dorsalis
ENSSMAG00000007545	-	82	50.845	ENSSLDG00000004886	-	99	45.895	Seriola_lalandi_dorsalis
ENSSMAG00000007545	-	82	49.762	ENSSPAG00000001850	-	99	46.055	Stegastes_partitus
ENSSMAG00000007545	-	100	84.954	ENSSPAG00000009485	-	100	85.817	Stegastes_partitus
ENSSMAG00000007545	-	99	77.697	ENSTRUG00000022519	-	99	77.640	Takifugu_rubripes
ENSSMAG00000007545	-	62	77.295	ENSTNIG00000014519	-	100	80.405	Tetraodon_nigroviridis
ENSSMAG00000007545	-	100	75.493	ENSXMAG00000027171	-	100	75.078	Xiphophorus_maculatus
ENSSMAG00000007545	-	82	47.009	ENSXMAG00000014715	-	83	80.000	Xiphophorus_maculatus