EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007571 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.1
Alias: rbm4|wu:fc31f07|wu:fc57h11
Full Name: RNA binding motif protein 4.1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3698 bases
Position: chr1:5600651-5604348
Accession: ZDB-GENE-030131-3902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012285	zf-CCHC	PF00098.23	4.2e-08	1	1
ENSSMAP00000012285	RRM_5	PF13893.6	4.8e-08	1	2
ENSSMAP00000012285	RRM_5	PF13893.6	4.8e-08	2	2
ENSSMAP00000012285	RRM_1	PF00076.22	5.5e-29	1	2
ENSSMAP00000012285	RRM_1	PF00076.22	5.5e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012442	-	3199	-	ENSSMAP00000012285	417 (aa)	-	A0A2U9AVZ5

Gene Model

Click here to download ENSSMAG00000007571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007571	rbm4.1	65	54.000	ENSSMAG00000013644	rbm4.3	100	37.011
ENSSMAG00000007571	rbm4.1	65	52.941	ENSSMAG00000013653	rbm4.3	80	52.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007571	rbm4.1	100	83.571	ENSAPOG00000012353	rbm4.1	100	85.476	Acanthochromis_polyacanthus
ENSSMAG00000007571	rbm4.1	100	83.610	ENSACIG00000016482	rbm4.1	100	85.273	Amphilophus_citrinellus
ENSSMAG00000007571	rbm4.1	100	83.810	ENSAOCG00000010915	rbm4.1	100	85.714	Amphiprion_ocellaris
ENSSMAG00000007571	rbm4.1	100	83.810	ENSAPEG00000009494	rbm4.1	100	85.714	Amphiprion_percula
ENSSMAG00000007571	rbm4.1	100	85.748	ENSATEG00000001904	rbm4.1	100	87.886	Anabas_testudineus
ENSSMAG00000007571	rbm4.1	100	83.373	ENSACLG00000007722	rbm4.1	100	85.036	Astatotilapia_calliptera
ENSSMAG00000007571	rbm4.1	99	44.604	ENSACLG00000007740	-	99	46.283	Astatotilapia_calliptera
ENSSMAG00000007571	rbm4.1	100	59.574	ENSAMXG00000036611	rbm4.1	100	61.939	Astyanax_mexicanus
ENSSMAG00000007571	rbm4.1	96	48.916	ENSCSEG00000014359	-	97	48.441	Cynoglossus_semilaevis
ENSSMAG00000007571	rbm4.1	100	73.747	ENSCSEG00000014365	rbm4.1	100	73.747	Cynoglossus_semilaevis
ENSSMAG00000007571	rbm4.1	100	74.762	ENSCVAG00000019349	rbm4.1	100	76.429	Cyprinodon_variegatus
ENSSMAG00000007571	rbm4.1	100	66.274	ENSDARG00000036386	rbm4.1	100	67.765	Danio_rerio
ENSSMAG00000007571	rbm4.1	100	65.105	ENSELUG00000013205	rbm4.1	100	65.574	Esox_lucius
ENSSMAG00000007571	rbm4.1	100	75.534	ENSFHEG00000022926	rbm4.1	100	75.534	Fundulus_heteroclitus
ENSSMAG00000007571	rbm4.1	92	50.886	ENSGMOG00000007455	-	92	52.010	Gadus_morhua
ENSSMAG00000007571	rbm4.1	100	64.706	ENSGMOG00000007464	rbm4.1	100	67.849	Gadus_morhua
ENSSMAG00000007571	rbm4.1	100	74.645	ENSGAFG00000019302	rbm4.1	100	74.882	Gambusia_affinis
ENSSMAG00000007571	rbm4.1	94	48.485	ENSGACG00000000821	-	94	49.626	Gasterosteus_aculeatus
ENSSMAG00000007571	rbm4.1	99	87.500	ENSGACG00000000822	rbm4.1	100	87.500	Gasterosteus_aculeatus
ENSSMAG00000007571	rbm4.1	100	83.373	ENSHBUG00000011610	rbm4.1	100	85.036	Haplochromis_burtoni
ENSSMAG00000007571	rbm4.1	96	68.159	ENSHCOG00000011403	rbm4.1	98	69.154	Hippocampus_comes
ENSSMAG00000007571	rbm4.1	100	62.329	ENSIPUG00000022931	rbm4.1	100	63.098	Ictalurus_punctatus
ENSSMAG00000007571	rbm4.1	100	48.946	ENSIPUG00000022937	rbm4.2	100	48.585	Ictalurus_punctatus
ENSSMAG00000007571	rbm4.1	100	75.355	ENSKMAG00000006556	rbm4.1	100	76.777	Kryptolebias_marmoratus
ENSSMAG00000007571	rbm4.1	100	80.000	ENSLBEG00000019782	rbm4.1	100	80.714	Labrus_bergylta
ENSSMAG00000007571	rbm4.1	98	47.952	ENSLBEG00000019756	-	90	60.897	Labrus_bergylta
ENSSMAG00000007571	rbm4.1	100	85.036	ENSMAMG00000001765	rbm4.1	100	86.936	Mastacembelus_armatus
ENSSMAG00000007571	rbm4.1	98	48.000	ENSMAMG00000001760	-	98	49.161	Mastacembelus_armatus
ENSSMAG00000007571	rbm4.1	100	83.373	ENSMZEG00005009205	rbm4.1	100	85.036	Maylandia_zebra
ENSSMAG00000007571	rbm4.1	100	83.649	ENSMMOG00000020479	rbm4.1	100	83.412	Mola_mola
ENSSMAG00000007571	rbm4.1	98	49.268	ENSMALG00000020557	-	98	49.758	Monopterus_albus
ENSSMAG00000007571	rbm4.1	100	84.323	ENSMALG00000020544	rbm4.1	100	85.748	Monopterus_albus
ENSSMAG00000007571	rbm4.1	100	83.610	ENSNBRG00000017755	rbm4.1	100	85.273	Neolamprologus_brichardi
ENSSMAG00000007571	rbm4.1	100	83.848	ENSONIG00000015730	rbm4.1	100	85.511	Oreochromis_niloticus
ENSSMAG00000007571	rbm4.1	100	75.534	ENSORLG00000012496	rbm4.1	100	75.059	Oryzias_latipes
ENSSMAG00000007571	rbm4.1	100	75.534	ENSORLG00020012454	rbm4.1	100	75.059	Oryzias_latipes_hni
ENSSMAG00000007571	rbm4.1	100	75.772	ENSORLG00015013678	rbm4.1	100	75.297	Oryzias_latipes_hsok
ENSSMAG00000007571	rbm4.1	100	75.772	ENSOMEG00000001001	rbm4.1	100	75.297	Oryzias_melastigma
ENSSMAG00000007571	rbm4.1	100	61.593	ENSPKIG00000020805	rbm4.1	85	79.710	Paramormyrops_kingsleyae
ENSSMAG00000007571	rbm4.1	99	45.215	ENSPFOG00000012685	-	99	45.047	Poecilia_formosa
ENSSMAG00000007571	rbm4.1	100	74.408	ENSPFOG00000012675	rbm4.1	100	74.645	Poecilia_formosa
ENSSMAG00000007571	rbm4.1	100	74.408	ENSPLAG00000018572	rbm4.1	100	74.645	Poecilia_latipinna
ENSSMAG00000007571	rbm4.1	100	74.408	ENSPMEG00000006290	rbm4.1	100	74.645	Poecilia_mexicana
ENSSMAG00000007571	rbm4.1	100	74.408	ENSPREG00000003724	rbm4.1	100	74.645	Poecilia_reticulata
ENSSMAG00000007571	rbm4.1	99	45.476	ENSPREG00000003764	-	99	66.845	Poecilia_reticulata
ENSSMAG00000007571	rbm4.1	100	83.373	ENSPNYG00000004662	rbm4.1	100	85.036	Pundamilia_nyererei
ENSSMAG00000007571	rbm4.1	100	63.915	ENSPNAG00000002539	rbm4.1	100	66.432	Pygocentrus_nattereri
ENSSMAG00000007571	rbm4.1	100	50.467	ENSPNAG00000013057	rbm4.2	100	50.000	Pygocentrus_nattereri
ENSSMAG00000007571	rbm4.1	100	62.061	ENSSFOG00015021996	sf1	100	62.529	Scleropages_formosus
ENSSMAG00000007571	rbm4.1	97	49.400	ENSSDUG00000003936	-	99	49.524	Seriola_dumerili
ENSSMAG00000007571	rbm4.1	100	85.036	ENSSDUG00000003925	rbm4.1	100	87.648	Seriola_dumerili
ENSSMAG00000007571	rbm4.1	97	49.275	ENSSLDG00000013157	-	99	50.119	Seriola_lalandi_dorsalis
ENSSMAG00000007571	rbm4.1	100	85.036	ENSSLDG00000013147	rbm4.1	100	87.648	Seriola_lalandi_dorsalis
ENSSMAG00000007571	rbm4.1	100	84.123	ENSSPAG00000019053	rbm4.1	100	87.204	Stegastes_partitus
ENSSMAG00000007571	rbm4.1	99	46.747	ENSSPAG00000019046	-	99	46.890	Stegastes_partitus
ENSSMAG00000007571	rbm4.1	99	47.470	ENSTRUG00000013328	-	99	47.242	Takifugu_rubripes
ENSSMAG00000007571	rbm4.1	100	77.327	ENSTRUG00000013334	rbm4.1	100	77.327	Takifugu_rubripes
ENSSMAG00000007571	rbm4.1	98	48.293	ENSTNIG00000000316	-	98	48.058	Tetraodon_nigroviridis
ENSSMAG00000007571	rbm4.1	82	79.476	ENSTNIG00000004821	rbm4.1	100	79.476	Tetraodon_nigroviridis
ENSSMAG00000007571	rbm4.1	100	74.408	ENSXCOG00000003731	rbm4.1	100	74.645	Xiphophorus_couchianus
ENSSMAG00000007571	rbm4.1	96	71.779	ENSXMAG00000008059	-	87	67.380	Xiphophorus_maculatus
ENSSMAG00000007571	rbm4.1	100	74.171	ENSXMAG00000008069	rbm4.1	100	74.408	Xiphophorus_maculatus