EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007572 (Gene tree)
Gene ID: -
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 19535 bases
Position: chr16:12365448-12384982
Accession: ZDB-GENE-040426-2854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012347	rRNA_proc-arch	PF13234.6	3.3e-87	1	1
ENSSMAP00000012347	DEAD	PF00270.29	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012504	-	3139	-	ENSSMAP00000012347	1035 (aa)	-	A0A2U9CFR1

Gene Model

Click here to download ENSSMAG00000007572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007572	mtrex	94	35.079	ENSSMAG00000020185	skiv2l	80	35.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007572	mtrex	100	82.650	ENSG00000039123	MTREX	100	82.762	Homo_sapiens
ENSSMAG00000007572	mtrex	100	94.311	ENSAPOG00000007814	mtrex	100	94.311	Acanthochromis_polyacanthus
ENSSMAG00000007572	mtrex	100	82.778	ENSAMEG00000013856	MTREX	100	82.778	Ailuropoda_melanoleuca
ENSSMAG00000007572	mtrex	100	90.531	ENSACIG00000015117	mtrex	100	90.338	Amphilophus_citrinellus
ENSSMAG00000007572	mtrex	100	94.214	ENSAOCG00000011884	mtrex	100	94.214	Amphiprion_ocellaris
ENSSMAG00000007572	mtrex	100	94.311	ENSAPEG00000019384	mtrex	100	94.311	Amphiprion_percula
ENSSMAG00000007572	mtrex	100	94.793	ENSATEG00000015117	mtrex	100	94.793	Anabas_testudineus
ENSSMAG00000007572	mtrex	94	86.210	ENSAPLG00000009694	MTREX	98	86.210	Anas_platyrhynchos
ENSSMAG00000007572	mtrex	100	84.019	ENSACAG00000015200	MTREX	96	84.115	Anolis_carolinensis
ENSSMAG00000007572	mtrex	100	83.143	ENSANAG00000023095	MTREX	100	83.143	Aotus_nancymaae
ENSSMAG00000007572	mtrex	100	93.925	ENSACLG00000001921	mtrex	100	93.925	Astatotilapia_calliptera
ENSSMAG00000007572	mtrex	95	87.045	ENSAMXG00000018751	mtrex	99	87.045	Astyanax_mexicanus
ENSSMAG00000007572	mtrex	100	83.174	ENSBTAG00000010518	MTREX	100	83.048	Bos_taurus
ENSSMAG00000007572	mtrex	91	53.291	WBGene00012342	mtr-4	91	52.648	Caenorhabditis_elegans
ENSSMAG00000007572	mtrex	100	82.068	ENSCJAG00000001773	MTREX	100	82.292	Callithrix_jacchus
ENSSMAG00000007572	mtrex	100	82.952	ENSCAFG00000006818	MTREX	100	82.952	Canis_familiaris
ENSSMAG00000007572	mtrex	100	82.952	ENSCAFG00020024352	MTREX	100	82.952	Canis_lupus_dingo
ENSSMAG00000007572	mtrex	100	82.841	ENSCHIG00000024413	MTREX	100	82.841	Capra_hircus
ENSSMAG00000007572	mtrex	93	84.740	ENSTSYG00000007389	MTREX	100	84.740	Carlito_syrichta
ENSSMAG00000007572	mtrex	86	76.484	ENSCAPG00000008696	MTREX	95	76.256	Cavia_aperea
ENSSMAG00000007572	mtrex	100	82.841	ENSCPOG00000009797	MTREX	100	82.841	Cavia_porcellus
ENSSMAG00000007572	mtrex	100	83.206	ENSCCAG00000014177	MTREX	100	83.143	Cebus_capucinus
ENSSMAG00000007572	mtrex	100	82.824	ENSCATG00000042153	MTREX	100	82.873	Cercocebus_atys
ENSSMAG00000007572	mtrex	100	83.015	ENSCLAG00000006622	MTREX	100	83.143	Chinchilla_lanigera
ENSSMAG00000007572	mtrex	100	79.163	ENSCSAG00000016445	MTREX	100	79.222	Chlorocebus_sabaeus
ENSSMAG00000007572	mtrex	69	95.833	ENSCHOG00000010936	-	70	95.833	Choloepus_hoffmanni
ENSSMAG00000007572	mtrex	100	83.750	ENSCPBG00000026551	MTREX	94	83.750	Chrysemys_picta_bellii
ENSSMAG00000007572	mtrex	99	64.909	ENSCING00000003239	-	99	65.673	Ciona_intestinalis
ENSSMAG00000007572	mtrex	99	64.395	ENSCSAVG00000009304	-	100	69.025	Ciona_savignyi
ENSSMAG00000007572	mtrex	100	81.750	ENSCANG00000035770	MTREX	100	81.750	Colobus_angolensis_palliatus
ENSSMAG00000007572	mtrex	100	83.206	ENSCGRG00001024680	Mtrex	100	83.206	Cricetulus_griseus_chok1gshd
ENSSMAG00000007572	mtrex	100	83.206	ENSCGRG00000000307	Mtrex	100	83.206	Cricetulus_griseus_crigri
ENSSMAG00000007572	mtrex	100	92.285	ENSCSEG00000018621	mtrex	98	92.478	Cynoglossus_semilaevis
ENSSMAG00000007572	mtrex	100	92.864	ENSCVAG00000004556	mtrex	100	92.864	Cyprinodon_variegatus
ENSSMAG00000007572	mtrex	100	86.114	ENSDARG00000013457	mtrex	100	86.114	Danio_rerio
ENSSMAG00000007572	mtrex	100	83.080	ENSDNOG00000015375	MTREX	100	83.080	Dasypus_novemcinctus
ENSSMAG00000007572	mtrex	100	83.048	ENSDORG00000006782	Mtrex	100	83.048	Dipodomys_ordii
ENSSMAG00000007572	mtrex	98	62.671	FBgn0001986	Mtr4	96	62.573	Drosophila_melanogaster
ENSSMAG00000007572	mtrex	90	68.372	ENSETEG00000000727	MTREX	90	68.372	Echinops_telfairi
ENSSMAG00000007572	mtrex	99	72.859	ENSEBUG00000012869	mtrex	99	72.859	Eptatretus_burgeri
ENSSMAG00000007572	mtrex	100	82.745	ENSEASG00005013270	MTREX	100	82.952	Equus_asinus_asinus
ENSSMAG00000007572	mtrex	100	82.841	ENSECAG00000023723	MTREX	100	89.767	Equus_caballus
ENSSMAG00000007572	mtrex	98	75.170	ENSEEUG00000000527	MTREX	100	75.411	Erinaceus_europaeus
ENSSMAG00000007572	mtrex	98	87.573	ENSELUG00000004898	mtrex	100	91.291	Esox_lucius
ENSSMAG00000007572	mtrex	100	83.048	ENSFCAG00000010575	MTREX	100	83.048	Felis_catus
ENSSMAG00000007572	mtrex	100	82.596	ENSFALG00000010850	MTREX	100	82.596	Ficedula_albicollis
ENSSMAG00000007572	mtrex	100	82.683	ENSFDAG00000011199	MTREX	100	82.683	Fukomys_damarensis
ENSSMAG00000007572	mtrex	100	92.382	ENSFHEG00000023014	mtrex	100	90.164	Fundulus_heteroclitus
ENSSMAG00000007572	mtrex	100	87.053	ENSGMOG00000014702	mtrex	100	87.053	Gadus_morhua
ENSSMAG00000007572	mtrex	100	83.333	ENSGALG00000014709	MTREX	86	83.333	Gallus_gallus
ENSSMAG00000007572	mtrex	100	92.189	ENSGAFG00000012425	mtrex	100	92.189	Gambusia_affinis
ENSSMAG00000007572	mtrex	100	88.309	ENSGACG00000016260	mtrex	99	92.826	Gasterosteus_aculeatus
ENSSMAG00000007572	mtrex	100	83.942	ENSGAGG00000020036	MTREX	100	83.942	Gopherus_agassizii
ENSSMAG00000007572	mtrex	100	82.650	ENSGGOG00000001867	MTREX	100	82.762	Gorilla_gorilla
ENSSMAG00000007572	mtrex	100	93.925	ENSHBUG00000006229	mtrex	100	93.925	Haplochromis_burtoni
ENSSMAG00000007572	mtrex	100	82.887	ENSHGLG00000019445	SKIV2L2	100	82.667	Heterocephalus_glaber_female
ENSSMAG00000007572	mtrex	100	82.887	ENSHGLG00100011833	SKIV2L2	100	82.667	Heterocephalus_glaber_male
ENSSMAG00000007572	mtrex	92	91.641	ENSHCOG00000019995	mtrex	100	91.641	Hippocampus_comes
ENSSMAG00000007572	mtrex	100	85.563	ENSIPUG00000024348	skiv2l2	100	85.563	Ictalurus_punctatus
ENSSMAG00000007572	mtrex	100	82.762	ENSSTOG00000010802	MTREX	100	82.952	Ictidomys_tridecemlineatus
ENSSMAG00000007572	mtrex	100	78.407	ENSJJAG00000020975	Mtrex	100	78.407	Jaculus_jaculus
ENSSMAG00000007572	mtrex	100	93.720	ENSKMAG00000012642	mtrex	100	93.720	Kryptolebias_marmoratus
ENSSMAG00000007572	mtrex	100	95.082	ENSLBEG00000019367	mtrex	100	95.082	Labrus_bergylta
ENSSMAG00000007572	mtrex	100	84.231	ENSLACG00000009075	MTREX	100	84.231	Latimeria_chalumnae
ENSSMAG00000007572	mtrex	100	86.551	ENSLOCG00000010186	mtrex	100	86.551	Lepisosteus_oculatus
ENSSMAG00000007572	mtrex	99	80.857	ENSLAFG00000010497	MTREX	100	80.934	Loxodonta_africana
ENSSMAG00000007572	mtrex	100	82.824	ENSMFAG00000031610	MTREX	100	82.873	Macaca_fascicularis
ENSSMAG00000007572	mtrex	100	83.143	ENSMMUG00000010379	MTREX	100	82.778	Macaca_mulatta
ENSSMAG00000007572	mtrex	100	82.824	ENSMNEG00000032746	MTREX	100	82.873	Macaca_nemestrina
ENSSMAG00000007572	mtrex	100	82.824	ENSMLEG00000041051	MTREX	100	82.873	Mandrillus_leucophaeus
ENSSMAG00000007572	mtrex	100	91.691	ENSMAMG00000016753	mtrex	98	95.683	Mastacembelus_armatus
ENSSMAG00000007572	mtrex	100	93.925	ENSMZEG00005000414	mtrex	100	93.925	Maylandia_zebra
ENSSMAG00000007572	mtrex	95	61.670	ENSMGAG00000003980	MTREX	99	61.368	Meleagris_gallopavo
ENSSMAG00000007572	mtrex	100	83.317	ENSMAUG00000010727	Mtrex	100	83.317	Mesocricetus_auratus
ENSSMAG00000007572	mtrex	100	83.127	ENSMICG00000012779	MTREX	100	83.333	Microcebus_murinus
ENSSMAG00000007572	mtrex	100	82.841	ENSMOCG00000019886	Mtrex	100	82.841	Microtus_ochrogaster
ENSSMAG00000007572	mtrex	100	91.023	ENSMMOG00000002476	mtrex	100	90.830	Mola_mola
ENSSMAG00000007572	mtrex	100	83.189	ENSMODG00000019494	MTREX	100	83.477	Monodelphis_domestica
ENSSMAG00000007572	mtrex	93	89.969	ENSMALG00000002917	mtrex	99	89.969	Monopterus_albus
ENSSMAG00000007572	mtrex	100	82.887	MGP_CAROLIEiJ_G0018896	Mtrex	100	82.887	Mus_caroli
ENSSMAG00000007572	mtrex	100	82.792	ENSMUSG00000016018	Mtrex	100	82.634	Mus_musculus
ENSSMAG00000007572	mtrex	100	82.887	MGP_PahariEiJ_G0015967	Mtrex	100	82.729	Mus_pahari
ENSSMAG00000007572	mtrex	100	82.792	MGP_SPRETEiJ_G0019775	Mtrex	100	82.634	Mus_spretus
ENSSMAG00000007572	mtrex	100	82.952	ENSMPUG00000007619	MTREX	100	82.952	Mustela_putorius_furo
ENSSMAG00000007572	mtrex	100	82.190	ENSMLUG00000001152	MTREX	100	82.286	Myotis_lucifugus
ENSSMAG00000007572	mtrex	100	82.841	ENSNGAG00000011938	Mtrex	100	83.048	Nannospalax_galili
ENSSMAG00000007572	mtrex	100	93.925	ENSNBRG00000011293	mtrex	100	93.925	Neolamprologus_brichardi
ENSSMAG00000007572	mtrex	100	78.782	ENSNLEG00000001494	MTREX	100	78.517	Nomascus_leucogenys
ENSSMAG00000007572	mtrex	83	96.078	ENSMEUG00000006496	-	83	96.078	Notamacropus_eugenii
ENSSMAG00000007572	mtrex	100	70.431	ENSOPRG00000008009	MTREX	100	70.431	Ochotona_princeps
ENSSMAG00000007572	mtrex	100	82.347	ENSODEG00000017234	MTREX	100	82.381	Octodon_degus
ENSSMAG00000007572	mtrex	100	94.021	ENSONIG00000007587	mtrex	100	94.021	Oreochromis_niloticus
ENSSMAG00000007572	mtrex	50	82.785	ENSOANG00000004885	-	99	82.785	Ornithorhynchus_anatinus
ENSSMAG00000007572	mtrex	100	83.365	ENSOCUG00000004463	MTREX	100	83.238	Oryctolagus_cuniculus
ENSSMAG00000007572	mtrex	100	91.803	ENSORLG00000005443	mtrex	100	91.803	Oryzias_latipes
ENSSMAG00000007572	mtrex	100	91.707	ENSORLG00020006329	mtrex	100	91.707	Oryzias_latipes_hni
ENSSMAG00000007572	mtrex	100	91.321	ENSORLG00015012924	mtrex	100	91.610	Oryzias_latipes_hsok
ENSSMAG00000007572	mtrex	100	91.530	ENSOMEG00000008825	mtrex	100	91.530	Oryzias_melastigma
ENSSMAG00000007572	mtrex	100	82.762	ENSOGAG00000002886	MTREX	100	83.143	Otolemur_garnettii
ENSSMAG00000007572	mtrex	100	82.605	ENSOARG00000007764	MTREX	100	82.605	Ovis_aries
ENSSMAG00000007572	mtrex	100	82.650	ENSPPAG00000039291	MTREX	100	82.762	Pan_paniscus
ENSSMAG00000007572	mtrex	100	83.048	ENSPPRG00000019701	MTREX	100	83.048	Panthera_pardus
ENSSMAG00000007572	mtrex	100	81.714	ENSPTIG00000009313	MTREX	100	81.714	Panthera_tigris_altaica
ENSSMAG00000007572	mtrex	100	82.650	ENSPTRG00000016878	MTREX	100	82.762	Pan_troglodytes
ENSSMAG00000007572	mtrex	100	82.729	ENSPANG00000009697	MTREX	100	82.778	Papio_anubis
ENSSMAG00000007572	mtrex	100	86.333	ENSPKIG00000020833	mtrex	100	86.333	Paramormyrops_kingsleyae
ENSSMAG00000007572	mtrex	100	83.558	ENSPSIG00000012150	MTREX	100	83.846	Pelodiscus_sinensis
ENSSMAG00000007572	mtrex	100	89.875	ENSPMGG00000002582	mtrex	100	89.875	Periophthalmus_magnuspinnatus
ENSSMAG00000007572	mtrex	95	65.116	ENSPMAG00000009668	mtrex	100	65.051	Petromyzon_marinus
ENSSMAG00000007572	mtrex	92	87.198	ENSPCIG00000024730	MTREX	100	87.198	Phascolarctos_cinereus
ENSSMAG00000007572	mtrex	76	94.416	ENSPFOG00000003141	mtrex	100	94.416	Poecilia_formosa
ENSSMAG00000007572	mtrex	100	92.189	ENSPLAG00000021311	mtrex	100	92.189	Poecilia_latipinna
ENSSMAG00000007572	mtrex	93	93.006	ENSPMEG00000010597	mtrex	99	92.797	Poecilia_mexicana
ENSSMAG00000007572	mtrex	100	91.996	ENSPREG00000003089	mtrex	100	91.996	Poecilia_reticulata
ENSSMAG00000007572	mtrex	98	82.364	ENSPPYG00000015469	MTREX	98	82.478	Pongo_abelii
ENSSMAG00000007572	mtrex	94	73.953	ENSPCAG00000013120	MTREX	94	73.953	Procavia_capensis
ENSSMAG00000007572	mtrex	99	77.487	ENSPCOG00000018092	MTREX	100	77.429	Propithecus_coquereli
ENSSMAG00000007572	mtrex	100	82.841	ENSPVAG00000002445	MTREX	100	83.048	Pteropus_vampyrus
ENSSMAG00000007572	mtrex	100	93.828	ENSPNYG00000006164	mtrex	100	93.828	Pundamilia_nyererei
ENSSMAG00000007572	mtrex	100	87.199	ENSPNAG00000008794	mtrex	100	87.392	Pygocentrus_nattereri
ENSSMAG00000007572	mtrex	99	82.143	ENSRNOG00000010125	Mtrex	97	82.415	Rattus_norvegicus
ENSSMAG00000007572	mtrex	100	81.107	ENSRBIG00000034930	MTREX	100	81.066	Rhinopithecus_bieti
ENSSMAG00000007572	mtrex	100	82.824	ENSRROG00000039895	MTREX	100	82.778	Rhinopithecus_roxellana
ENSSMAG00000007572	mtrex	90	55.312	YJL050W	MTR4	89	55.057	Saccharomyces_cerevisiae
ENSSMAG00000007572	mtrex	100	83.143	ENSSBOG00000026693	MTREX	100	83.143	Saimiri_boliviensis_boliviensis
ENSSMAG00000007572	mtrex	95	85.801	ENSSHAG00000004600	MTREX	98	85.801	Sarcophilus_harrisii
ENSSMAG00000007572	mtrex	100	86.814	ENSSFOG00015014355	skiv2l2	100	86.718	Scleropages_formosus
ENSSMAG00000007572	mtrex	100	95.661	ENSSDUG00000023789	mtrex	100	95.661	Seriola_dumerili
ENSSMAG00000007572	mtrex	100	95.853	ENSSLDG00000006301	mtrex	100	95.853	Seriola_lalandi_dorsalis
ENSSMAG00000007572	mtrex	92	87.043	ENSSARG00000008387	MTREX	100	81.143	Sorex_araneus
ENSSMAG00000007572	mtrex	89	85.406	ENSSPUG00000007071	MTREX	96	85.406	Sphenodon_punctatus
ENSSMAG00000007572	mtrex	100	89.904	ENSSPAG00000011319	mtrex	100	89.904	Stegastes_partitus
ENSSMAG00000007572	mtrex	100	82.841	ENSSSCG00000016911	MTREX	100	83.048	Sus_scrofa
ENSSMAG00000007572	mtrex	100	82.342	ENSTGUG00000002480	MTREX	100	82.342	Taeniopygia_guttata
ENSSMAG00000007572	mtrex	100	91.498	ENSTRUG00000014571	mtrex	100	91.498	Takifugu_rubripes
ENSSMAG00000007572	mtrex	100	68.351	ENSTBEG00000007769	MTREX	100	68.571	Tupaia_belangeri
ENSSMAG00000007572	mtrex	100	82.983	ENSTTRG00000008678	MTREX	100	82.762	Tursiops_truncatus
ENSSMAG00000007572	mtrex	100	82.762	ENSUAMG00000023061	MTREX	100	82.762	Ursus_americanus
ENSSMAG00000007572	mtrex	100	82.901	ENSUMAG00000009373	MTREX	99	88.014	Ursus_maritimus
ENSSMAG00000007572	mtrex	100	73.714	ENSVPAG00000011174	MTREX	100	73.333	Vicugna_pacos
ENSSMAG00000007572	mtrex	100	83.048	ENSVVUG00000021337	MTREX	100	83.048	Vulpes_vulpes
ENSSMAG00000007572	mtrex	100	84.438	ENSXETG00000032798	MTREX	100	84.438	Xenopus_tropicalis
ENSSMAG00000007572	mtrex	100	92.671	ENSXMAG00000004799	mtrex	100	92.671	Xiphophorus_maculatus