EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007575 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 1095 bases
Position: chr1:5608818-5609912
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012300	RRM_5	PF13893.6	5.5e-07	1	1
ENSSMAP00000012300	RRM_1	PF00076.22	3.1e-31	1	2
ENSSMAP00000012300	RRM_1	PF00076.22	3.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012457	-	471	-	ENSSMAP00000012300	156 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007575	-	52	30.864	ENSSMAG00000014861	-	59	30.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007575	-	91	89.437	ENSAPOG00000012375	-	97	89.437	Acanthochromis_polyacanthus
ENSSMAG00000007575	-	92	87.500	ENSACIG00000016472	-	88	87.500	Amphilophus_citrinellus
ENSSMAG00000007575	-	91	90.845	ENSAOCG00000010907	-	97	90.845	Amphiprion_ocellaris
ENSSMAG00000007575	-	93	88.966	ENSAPEG00000009476	-	90	88.966	Amphiprion_percula
ENSSMAG00000007575	-	99	81.169	ENSATEG00000001912	-	95	81.169	Anabas_testudineus
ENSSMAG00000007575	-	90	57.857	ENSAMXG00000032121	rbm4.2	88	57.857	Astyanax_mexicanus
ENSSMAG00000007575	-	88	50.725	ENSCPBG00000023666	-	92	50.725	Chrysemys_picta_bellii
ENSSMAG00000007575	-	90	65.468	ENSCSEG00000007739	-	99	65.468	Cynoglossus_semilaevis
ENSSMAG00000007575	-	99	65.584	ENSDARG00000036386	rbm4.1	79	70.290	Danio_rerio
ENSSMAG00000007575	-	99	57.143	ENSEBUG00000007174	-	88	57.143	Eptatretus_burgeri
ENSSMAG00000007575	-	94	80.137	ENSFHEG00000003483	-	96	80.137	Fundulus_heteroclitus
ENSSMAG00000007575	-	94	76.712	ENSGAFG00000019301	-	96	76.712	Gambusia_affinis
ENSSMAG00000007575	-	88	50.725	ENSGAGG00000014558	-	92	50.725	Gopherus_agassizii
ENSSMAG00000007575	-	95	83.108	ENSHBUG00000011624	-	95	83.108	Haplochromis_burtoni
ENSSMAG00000007575	-	99	76.101	ENSHCOG00000011413	-	94	76.101	Hippocampus_comes
ENSSMAG00000007575	-	99	79.870	ENSLBEG00000019756	-	88	82.192	Labrus_bergylta
ENSSMAG00000007575	-	90	53.957	ENSLACG00000006343	zgc:77262	52	53.957	Latimeria_chalumnae
ENSSMAG00000007575	-	90	64.493	ENSLOCG00000002772	rbm4.1	99	64.493	Lepisosteus_oculatus
ENSSMAG00000007575	-	92	77.778	ENSMZEG00005009210	-	80	77.778	Maylandia_zebra
ENSSMAG00000007575	-	91	55.634	ENSMZEG00005028161	-	79	55.634	Maylandia_zebra
ENSSMAG00000007575	-	90	85.816	ENSMZEG00005028160	-	96	85.816	Maylandia_zebra
ENSSMAG00000007575	-	88	85.507	ENSMMOG00000020484	-	86	85.507	Mola_mola
ENSSMAG00000007575	-	95	83.108	ENSNBRG00000017763	-	94	83.108	Neolamprologus_brichardi
ENSSMAG00000007575	-	99	62.987	ENSPKIG00000020805	rbm4.1	85	67.391	Paramormyrops_kingsleyae
ENSSMAG00000007575	-	92	68.056	ENSPMGG00000004331	rbm4.1	96	68.056	Periophthalmus_magnuspinnatus
ENSSMAG00000007575	-	90	52.857	ENSPMAG00000003433	rbm4.2	69	52.857	Petromyzon_marinus
ENSSMAG00000007575	-	95	75.676	ENSPLAG00000018569	-	91	75.676	Poecilia_latipinna
ENSSMAG00000007575	-	95	75.676	ENSPMEG00000006278	-	91	75.676	Poecilia_mexicana
ENSSMAG00000007575	-	95	83.108	ENSPNYG00000004649	-	94	83.108	Pundamilia_nyererei
ENSSMAG00000007575	-	92	54.478	ENSSFOG00015018567	zgc:77262	89	54.478	Scleropages_formosus
ENSSMAG00000007575	-	94	76.712	ENSXCOG00000003730	-	91	76.712	Xiphophorus_couchianus