EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000007586 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh1
Alias: zgc:91971
Full Name: ribonuclease H1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4273 bases
Position: chr20:18826983-18831255
Accession: ZDB-GENE-040718-407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012328	RNase_H	PF00075.24	1.4e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012485	-	1580	-	ENSSMAP00000012328	302 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007586	rnaseh1	87	57.358	ENSG00000171865	RNASEH1	89	56.981	Homo_sapiens
ENSSMAG00000007586	rnaseh1	99	78.405	ENSAPOG00000000412	rnaseh1	100	78.405	Acanthochromis_polyacanthus
ENSSMAG00000007586	rnaseh1	87	55.431	ENSAMEG00000018433	RNASEH1	98	52.041	Ailuropoda_melanoleuca
ENSSMAG00000007586	rnaseh1	100	78.218	ENSACIG00000014666	rnaseh1	99	78.218	Amphilophus_citrinellus
ENSSMAG00000007586	rnaseh1	99	80.066	ENSAOCG00000015210	rnaseh1	100	80.066	Amphiprion_ocellaris
ENSSMAG00000007586	rnaseh1	99	80.066	ENSAPEG00000014104	rnaseh1	100	80.066	Amphiprion_percula
ENSSMAG00000007586	rnaseh1	99	79.605	ENSATEG00000000598	rnaseh1	100	81.206	Anabas_testudineus
ENSSMAG00000007586	rnaseh1	83	55.598	ENSAPLG00000001961	RNASEH1	100	54.826	Anas_platyrhynchos
ENSSMAG00000007586	rnaseh1	87	47.797	ENSACAG00000016857	rnaseh1	91	46.102	Anolis_carolinensis
ENSSMAG00000007586	rnaseh1	96	53.925	ENSANAG00000024055	RNASEH1	98	53.584	Aotus_nancymaae
ENSSMAG00000007586	rnaseh1	100	77.023	ENSACLG00000006741	rnaseh1	99	77.346	Astatotilapia_calliptera
ENSSMAG00000007586	rnaseh1	96	55.363	ENSAMXG00000042940	rnaseh1	97	59.273	Astyanax_mexicanus
ENSSMAG00000007586	rnaseh1	97	53.741	ENSBTAG00000016235	RNASEH1	99	53.741	Bos_taurus
ENSSMAG00000007586	rnaseh1	88	38.828	WBGene00004382	rnh-1.0	97	37.729	Caenorhabditis_elegans
ENSSMAG00000007586	rnaseh1	87	55.762	ENSCJAG00000035450	RNASEH1	89	55.390	Callithrix_jacchus
ENSSMAG00000007586	rnaseh1	96	53.242	ENSCAFG00000003259	RNASEH1	98	51.186	Canis_familiaris
ENSSMAG00000007586	rnaseh1	97	52.721	ENSCHIG00000022264	-	99	51.864	Capra_hircus
ENSSMAG00000007586	rnaseh1	80	43.496	ENSCHIG00000022230	-	99	42.915	Capra_hircus
ENSSMAG00000007586	rnaseh1	88	54.851	ENSTSYG00000012926	RNASEH1	89	54.478	Carlito_syrichta
ENSSMAG00000007586	rnaseh1	82	55.556	ENSCAPG00000004813	RNASEH1	99	55.556	Cavia_aperea
ENSSMAG00000007586	rnaseh1	88	55.390	ENSCPOG00000022278	Rnaseh1	87	55.390	Cavia_porcellus
ENSSMAG00000007586	rnaseh1	87	56.506	ENSCCAG00000038017	RNASEH1	89	56.134	Cebus_capucinus
ENSSMAG00000007586	rnaseh1	87	56.274	ENSCATG00000016515	-	89	55.894	Cercocebus_atys
ENSSMAG00000007586	rnaseh1	87	51.331	ENSCATG00000016818	-	89	50.189	Cercocebus_atys
ENSSMAG00000007586	rnaseh1	87	56.015	ENSCLAG00000002440	RNASEH1	89	55.639	Chinchilla_lanigera
ENSSMAG00000007586	rnaseh1	87	56.226	ENSCSAG00000006943	RNASEH1	89	55.849	Chlorocebus_sabaeus
ENSSMAG00000007586	rnaseh1	54	67.284	ENSCHOG00000008547	RNASEH1	74	70.199	Choloepus_hoffmanni
ENSSMAG00000007586	rnaseh1	87	56.134	ENSCPBG00000021620	RNASEH1	99	56.134	Chrysemys_picta_bellii
ENSSMAG00000007586	rnaseh1	88	37.818	ENSCING00000014054	-	93	37.818	Ciona_intestinalis
ENSSMAG00000007586	rnaseh1	74	38.865	ENSCSAVG00000000009	-	96	38.462	Ciona_savignyi
ENSSMAG00000007586	rnaseh1	87	56.604	ENSCANG00000037763	RNASEH1	89	56.226	Colobus_angolensis_palliatus
ENSSMAG00000007586	rnaseh1	92	52.330	ENSCGRG00001008950	Rnaseh1	92	53.357	Cricetulus_griseus_chok1gshd
ENSSMAG00000007586	rnaseh1	92	52.330	ENSCGRG00000006029	Rnaseh1	92	53.357	Cricetulus_griseus_crigri
ENSSMAG00000007586	rnaseh1	99	68.810	ENSCSEG00000005741	rnaseh1	97	69.453	Cynoglossus_semilaevis
ENSSMAG00000007586	rnaseh1	99	74.333	ENSCVAG00000018717	rnaseh1	99	74.333	Cyprinodon_variegatus
ENSSMAG00000007586	rnaseh1	89	68.727	ENSDARG00000042571	rnaseh1	98	68.727	Danio_rerio
ENSSMAG00000007586	rnaseh1	95	51.890	ENSDNOG00000016056	RNASEH1	98	51.890	Dasypus_novemcinctus
ENSSMAG00000007586	rnaseh1	87	55.639	ENSDORG00000000704	Rnaseh1	89	55.263	Dipodomys_ordii
ENSSMAG00000007586	rnaseh1	86	37.457	FBgn0023171	rnh1	92	37.457	Drosophila_melanogaster
ENSSMAG00000007586	rnaseh1	87	51.880	ENSETEG00000012674	RNASEH1	89	51.880	Echinops_telfairi
ENSSMAG00000007586	rnaseh1	88	46.102	ENSEBUG00000008898	rnaseh1	99	45.361	Eptatretus_burgeri
ENSSMAG00000007586	rnaseh1	88	46.269	ENSEBUG00000006116	rnaseh1	79	45.055	Eptatretus_burgeri
ENSSMAG00000007586	rnaseh1	96	53.952	ENSEASG00005022200	RNASEH1	97	53.952	Equus_asinus_asinus
ENSSMAG00000007586	rnaseh1	96	53.952	ENSECAG00000020695	RNASEH1	97	53.952	Equus_caballus
ENSSMAG00000007586	rnaseh1	96	70.667	ENSELUG00000010112	rnaseh1	99	70.667	Esox_lucius
ENSSMAG00000007586	rnaseh1	96	54.110	ENSFCAG00000025832	RNASEH1	98	53.767	Felis_catus
ENSSMAG00000007586	rnaseh1	88	56.429	ENSFALG00000002069	RNASEH1	93	56.071	Ficedula_albicollis
ENSSMAG00000007586	rnaseh1	87	56.015	ENSFDAG00000002035	RNASEH1	79	56.015	Fukomys_damarensis
ENSSMAG00000007586	rnaseh1	96	71.918	ENSGMOG00000013818	rnaseh1	99	71.575	Gadus_morhua
ENSSMAG00000007586	rnaseh1	88	58.456	ENSGALG00000016389	RNASEH1	93	58.456	Gallus_gallus
ENSSMAG00000007586	rnaseh1	96	68.836	ENSGAFG00000001776	rnaseh1	99	68.836	Gambusia_affinis
ENSSMAG00000007586	rnaseh1	96	80.952	ENSGACG00000011935	rnaseh1	98	80.952	Gasterosteus_aculeatus
ENSSMAG00000007586	rnaseh1	87	58.148	ENSGAGG00000009150	RNASEH1	61	57.778	Gopherus_agassizii
ENSSMAG00000007586	rnaseh1	87	57.358	ENSGGOG00000034822	RNASEH1	89	56.981	Gorilla_gorilla
ENSSMAG00000007586	rnaseh1	100	75.974	ENSHBUG00000004666	rnaseh1	99	76.299	Haplochromis_burtoni
ENSSMAG00000007586	rnaseh1	87	53.788	ENSHGLG00000002585	Rnaseh1	82	53.558	Heterocephalus_glaber_female
ENSSMAG00000007586	rnaseh1	87	53.788	ENSHGLG00100005105	Rnaseh1	82	53.558	Heterocephalus_glaber_male
ENSSMAG00000007586	rnaseh1	96	71.382	ENSHCOG00000012329	rnaseh1	98	71.382	Hippocampus_comes
ENSSMAG00000007586	rnaseh1	97	61.092	ENSIPUG00000023060	rnaseh1	98	62.454	Ictalurus_punctatus
ENSSMAG00000007586	rnaseh1	87	54.545	ENSSTOG00000012774	RNASEH1	91	54.545	Ictidomys_tridecemlineatus
ENSSMAG00000007586	rnaseh1	79	52.720	ENSJJAG00000020238	Rnaseh1	90	52.301	Jaculus_jaculus
ENSSMAG00000007586	rnaseh1	85	44.922	ENSJJAG00000008994	-	88	44.531	Jaculus_jaculus
ENSSMAG00000007586	rnaseh1	87	50.382	ENSJJAG00000021481	-	89	50.000	Jaculus_jaculus
ENSSMAG00000007586	rnaseh1	98	72.391	ENSKMAG00000001373	rnaseh1	98	72.391	Kryptolebias_marmoratus
ENSSMAG00000007586	rnaseh1	99	76.898	ENSLBEG00000004480	rnaseh1	97	81.919	Labrus_bergylta
ENSSMAG00000007586	rnaseh1	89	56.786	ENSLACG00000007100	RNASEH1	90	56.786	Latimeria_chalumnae
ENSSMAG00000007586	rnaseh1	90	64.388	ENSLOCG00000017212	rnaseh1	99	64.260	Lepisosteus_oculatus
ENSSMAG00000007586	rnaseh1	87	56.818	ENSLAFG00000015091	RNASEH1	89	56.818	Loxodonta_africana
ENSSMAG00000007586	rnaseh1	87	52.075	ENSMFAG00000002323	-	89	51.321	Macaca_fascicularis
ENSSMAG00000007586	rnaseh1	87	56.604	ENSMFAG00000000063	-	89	56.226	Macaca_fascicularis
ENSSMAG00000007586	rnaseh1	87	52.075	ENSMMUG00000019280	-	89	51.321	Macaca_mulatta
ENSSMAG00000007586	rnaseh1	87	56.981	ENSMNEG00000040183	-	89	56.604	Macaca_nemestrina
ENSSMAG00000007586	rnaseh1	87	51.698	ENSMNEG00000029676	-	89	50.943	Macaca_nemestrina
ENSSMAG00000007586	rnaseh1	81	56.855	ENSMLEG00000039352	-	98	56.452	Mandrillus_leucophaeus
ENSSMAG00000007586	rnaseh1	87	52.830	ENSMLEG00000028662	-	89	52.672	Mandrillus_leucophaeus
ENSSMAG00000007586	rnaseh1	99	79.538	ENSMAMG00000019725	rnaseh1	99	80.071	Mastacembelus_armatus
ENSSMAG00000007586	rnaseh1	100	77.023	ENSMZEG00005013006	rnaseh1	99	77.346	Maylandia_zebra
ENSSMAG00000007586	rnaseh1	78	57.787	ENSMGAG00000013979	RNASEH1	99	57.787	Meleagris_gallopavo
ENSSMAG00000007586	rnaseh1	92	53.004	ENSMAUG00000014957	Rnaseh1	89	54.511	Mesocricetus_auratus
ENSSMAG00000007586	rnaseh1	87	55.303	ENSMICG00000033156	RNASEH1	88	55.094	Microcebus_murinus
ENSSMAG00000007586	rnaseh1	92	53.684	ENSMOCG00000015522	Rnaseh1	92	53.357	Microtus_ochrogaster
ENSSMAG00000007586	rnaseh1	98	77.076	ENSMMOG00000015902	rnaseh1	99	77.076	Mola_mola
ENSSMAG00000007586	rnaseh1	81	49.388	ENSMODG00000028814	-	96	49.593	Monodelphis_domestica
ENSSMAG00000007586	rnaseh1	87	56.604	ENSMODG00000014491	-	89	56.604	Monodelphis_domestica
ENSSMAG00000007586	rnaseh1	99	79.734	ENSMALG00000010565	rnaseh1	99	79.734	Monopterus_albus
ENSSMAG00000007586	rnaseh1	92	53.191	MGP_CAROLIEiJ_G0017660	Rnaseh1	92	53.357	Mus_caroli
ENSSMAG00000007586	rnaseh1	92	53.546	ENSMUSG00000020630	Rnaseh1	92	53.004	Mus_musculus
ENSSMAG00000007586	rnaseh1	92	52.330	MGP_PahariEiJ_G0029418	Rnaseh1	92	53.004	Mus_pahari
ENSSMAG00000007586	rnaseh1	92	53.191	MGP_SPRETEiJ_G0018502	Rnaseh1	92	53.004	Mus_spretus
ENSSMAG00000007586	rnaseh1	58	61.582	ENSMPUG00000012984	RNASEH1	72	67.785	Mustela_putorius_furo
ENSSMAG00000007586	rnaseh1	87	55.344	ENSNGAG00000015966	Rnaseh1	84	55.344	Nannospalax_galili
ENSSMAG00000007586	rnaseh1	100	76.699	ENSNBRG00000008739	rnaseh1	99	77.023	Neolamprologus_brichardi
ENSSMAG00000007586	rnaseh1	87	49.438	ENSNLEG00000015400	RNASEH1	87	47.328	Nomascus_leucogenys
ENSSMAG00000007586	rnaseh1	80	51.837	ENSNLEG00000000059	-	88	51.429	Nomascus_leucogenys
ENSSMAG00000007586	rnaseh1	64	47.179	ENSMEUG00000003610	-	65	47.179	Notamacropus_eugenii
ENSSMAG00000007586	rnaseh1	88	55.805	ENSOPRG00000005072	RNASEH1	90	55.056	Ochotona_princeps
ENSSMAG00000007586	rnaseh1	87	57.519	ENSODEG00000000235	Rnaseh1	86	57.519	Octodon_degus
ENSSMAG00000007586	rnaseh1	90	80.144	ENSONIG00000018697	rnaseh1	99	79.783	Oreochromis_niloticus
ENSSMAG00000007586	rnaseh1	87	54.924	ENSOCUG00000006117	RNASEH1	89	53.788	Oryctolagus_cuniculus
ENSSMAG00000007586	rnaseh1	92	77.061	ENSORLG00000018127	rnaseh1	99	77.061	Oryzias_latipes
ENSSMAG00000007586	rnaseh1	99	75.083	ENSORLG00020013660	rnaseh1	99	75.083	Oryzias_latipes_hni
ENSSMAG00000007586	rnaseh1	99	75.083	ENSORLG00015011338	rnaseh1	99	75.083	Oryzias_latipes_hsok
ENSSMAG00000007586	rnaseh1	88	72.119	ENSOMEG00000004710	rnaseh1	99	72.119	Oryzias_melastigma
ENSSMAG00000007586	rnaseh1	87	55.094	ENSOGAG00000017176	RNASEH1	89	55.056	Otolemur_garnettii
ENSSMAG00000007586	rnaseh1	97	47.195	ENSOARG00000005386	RNASEH1	99	46.382	Ovis_aries
ENSSMAG00000007586	rnaseh1	87	57.358	ENSPPAG00000034221	RNASEH1	89	56.981	Pan_paniscus
ENSSMAG00000007586	rnaseh1	96	53.767	ENSPPRG00000015513	RNASEH1	98	53.425	Panthera_pardus
ENSSMAG00000007586	rnaseh1	81	57.085	ENSPTIG00000019034	RNASEH1	83	56.680	Panthera_tigris_altaica
ENSSMAG00000007586	rnaseh1	87	57.358	ENSPTRG00000011614	RNASEH1	89	56.981	Pan_troglodytes
ENSSMAG00000007586	rnaseh1	80	49.600	ENSPTRG00000043403	-	91	49.600	Pan_troglodytes
ENSSMAG00000007586	rnaseh1	87	56.604	ENSPANG00000000443	RNASEH1	97	56.627	Papio_anubis
ENSSMAG00000007586	rnaseh1	87	50.943	ENSPANG00000018246	-	88	50.189	Papio_anubis
ENSSMAG00000007586	rnaseh1	90	62.724	ENSPKIG00000003146	rnaseh1	100	62.366	Paramormyrops_kingsleyae
ENSSMAG00000007586	rnaseh1	87	56.667	ENSPSIG00000002937	RNASEH1	99	55.185	Pelodiscus_sinensis
ENSSMAG00000007586	rnaseh1	99	64.401	ENSPMGG00000017463	rnaseh1	99	65.862	Periophthalmus_magnuspinnatus
ENSSMAG00000007586	rnaseh1	92	53.405	ENSPEMG00000022465	-	92	53.763	Peromyscus_maniculatus_bairdii
ENSSMAG00000007586	rnaseh1	87	56.015	ENSPCIG00000023334	-	89	56.015	Phascolarctos_cinereus
ENSSMAG00000007586	rnaseh1	53	38.650	ENSPCIG00000026047	-	87	38.961	Phascolarctos_cinereus
ENSSMAG00000007586	rnaseh1	96	69.863	ENSPFOG00000002841	rnaseh1	99	69.863	Poecilia_formosa
ENSSMAG00000007586	rnaseh1	73	55.455	ENSPLAG00000021349	-	85	55.455	Poecilia_latipinna
ENSSMAG00000007586	rnaseh1	96	69.863	ENSPMEG00000016826	rnaseh1	99	69.863	Poecilia_mexicana
ENSSMAG00000007586	rnaseh1	96	68.792	ENSPREG00000012197	rnaseh1	99	68.792	Poecilia_reticulata
ENSSMAG00000007586	rnaseh1	80	51.837	ENSPPYG00000008067	-	90	51.429	Pongo_abelii
ENSSMAG00000007586	rnaseh1	87	46.038	ENSPPYG00000025873	RNASEH1	88	45.660	Pongo_abelii
ENSSMAG00000007586	rnaseh1	88	54.478	ENSPCAG00000002500	RNASEH1	90	54.478	Procavia_capensis
ENSSMAG00000007586	rnaseh1	87	49.242	ENSPCOG00000019444	RNASEH1	88	48.679	Propithecus_coquereli
ENSSMAG00000007586	rnaseh1	97	50.336	ENSPVAG00000002070	RNASEH1	99	50.853	Pteropus_vampyrus
ENSSMAG00000007586	rnaseh1	100	76.375	ENSPNYG00000001292	rnaseh1	99	76.699	Pundamilia_nyererei
ENSSMAG00000007586	rnaseh1	97	63.333	ENSPNAG00000022344	rnaseh1	99	63.000	Pygocentrus_nattereri
ENSSMAG00000007586	rnaseh1	92	53.710	ENSRNOG00000008584	Rnaseh1	92	53.357	Rattus_norvegicus
ENSSMAG00000007586	rnaseh1	87	56.061	ENSRBIG00000034222	RNASEH1	88	55.682	Rhinopithecus_bieti
ENSSMAG00000007586	rnaseh1	87	56.061	ENSRROG00000041761	RNASEH1	88	55.682	Rhinopithecus_roxellana
ENSSMAG00000007586	rnaseh1	89	46.000	YMR234W	-	87	46.000	Saccharomyces_cerevisiae
ENSSMAG00000007586	rnaseh1	96	52.703	ENSSBOG00000025411	RNASEH1	98	52.365	Saimiri_boliviensis_boliviensis
ENSSMAG00000007586	rnaseh1	88	56.929	ENSSHAG00000013051	RNASEH1	88	56.929	Sarcophilus_harrisii
ENSSMAG00000007586	rnaseh1	97	60.577	ENSSFOG00015002709	rnaseh1	100	59.661	Scleropages_formosus
ENSSMAG00000007586	rnaseh1	97	82.993	ENSSDUG00000008217	rnaseh1	99	83.929	Seriola_dumerili
ENSSMAG00000007586	rnaseh1	84	81.250	ENSSLDG00000000442	rnaseh1	95	82.213	Seriola_lalandi_dorsalis
ENSSMAG00000007586	rnaseh1	89	54.122	ENSSPUG00000006644	RNASEH1	93	54.122	Sphenodon_punctatus
ENSSMAG00000007586	rnaseh1	99	80.731	ENSSPAG00000009353	rnaseh1	99	80.731	Stegastes_partitus
ENSSMAG00000007586	rnaseh1	88	54.887	ENSSSCG00000025305	RNASEH1	99	51.186	Sus_scrofa
ENSSMAG00000007586	rnaseh1	88	54.676	ENSTGUG00000012980	RNASEH1	93	54.676	Taeniopygia_guttata
ENSSMAG00000007586	rnaseh1	98	72.727	ENSTRUG00000015774	rnaseh1	99	74.460	Takifugu_rubripes
ENSSMAG00000007586	rnaseh1	91	75.090	ENSTNIG00000010715	rnaseh1	99	75.090	Tetraodon_nigroviridis
ENSSMAG00000007586	rnaseh1	88	51.685	ENSTTRG00000001615	RNASEH1	90	51.685	Tursiops_truncatus
ENSSMAG00000007586	rnaseh1	51	65.161	ENSUAMG00000018254	RNASEH1	77	67.114	Ursus_americanus
ENSSMAG00000007586	rnaseh1	68	55.502	ENSUMAG00000003941	RNASEH1	65	55.502	Ursus_maritimus
ENSSMAG00000007586	rnaseh1	88	47.584	ENSVPAG00000011589	RNASEH1	90	47.212	Vicugna_pacos
ENSSMAG00000007586	rnaseh1	96	53.061	ENSVVUG00000008633	RNASEH1	88	51.361	Vulpes_vulpes
ENSSMAG00000007586	rnaseh1	87	37.786	ENSXETG00000030371	-	99	38.168	Xenopus_tropicalis
ENSSMAG00000007586	rnaseh1	96	49.508	ENSXETG00000001212	rnaseh1	100	49.667	Xenopus_tropicalis
ENSSMAG00000007586	rnaseh1	97	70.068	ENSXMAG00000002357	rnaseh1	99	70.068	Xiphophorus_maculatus