EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000007731 (Gene tree)
Gene ID
-
Gene Symbol
atxn1a
Alias
atxn1b|si:ch211-125a6.1
Full Name
ataxin 1a
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
77305 bases
Position
chr22:8189083-8266387
Accession
ZDB-GENE-060503-759
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000012548AXHPF08517.128.4e-4311
ENSSMAP00000012563AXHPF08517.128.4e-4311
ENSSMAP00000012574AXHPF08517.128.4e-4311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000012737-7435-ENSSMAP00000012574865 (aa)--
ENSSMAT00000012711-7592-ENSSMAP00000012548865 (aa)--
ENSSMAT00000012726-7495-ENSSMAP00000012563865 (aa)--
Gene Model
Click here to download ENSSMAG00000007731's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007731's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000007731atxn1a9439.140ENSSMAG00000019621atxn1b5147.872
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000007731atxn1a8946.212ENSG00000124788ATXN18147.674Homo_sapiens
ENSSMAG00000007731atxn1a9483.558ENSAPOG00000018662atxn1a9983.436Acanthochromis_polyacanthus
ENSSMAG00000007731atxn1a9440.319ENSAPOG00000005003atxn1b9739.453Acanthochromis_polyacanthus
ENSSMAG00000007731atxn1a9442.647ENSAMEG00000004299ATXN19943.084Ailuropoda_melanoleuca
ENSSMAG00000007731atxn1a8082.803ENSACIG00000016088atxn1a9973.529Amphilophus_citrinellus
ENSSMAG00000007731atxn1a9438.902ENSACIG00000014661atxn1b9738.169Amphilophus_citrinellus
ENSSMAG00000007731atxn1a9484.133ENSAOCG00000015796atxn1a9984.133Amphiprion_ocellaris
ENSSMAG00000007731atxn1a9440.115ENSAOCG00000019715atxn1b9740.745Amphiprion_ocellaris
ENSSMAG00000007731atxn1a9439.954ENSAPEG00000022436atxn1b9740.753Amphiprion_percula
ENSSMAG00000007731atxn1a9484.256ENSAPEG00000011313atxn1a9984.256Amphiprion_percula
ENSSMAG00000007731atxn1a9439.380ENSATEG00000002982atxn1b9739.286Anabas_testudineus
ENSSMAG00000007731atxn1a9481.427ENSATEG00000013601atxn1a9982.411Anabas_testudineus
ENSSMAG00000007731atxn1a9442.352ENSACAG00000003919ATXN19941.572Anolis_carolinensis
ENSSMAG00000007731atxn1a7538.075ENSANAG00000025424-5644.091Aotus_nancymaae
ENSSMAG00000007731atxn1a9441.939ENSANAG00000025206-6247.517Aotus_nancymaae
ENSSMAG00000007731atxn1a9480.221ENSACLG00000015429atxn1a9980.958Astatotilapia_calliptera
ENSSMAG00000007731atxn1a9439.636ENSACLG00000005697atxn1b9739.356Astatotilapia_calliptera
ENSSMAG00000007731atxn1a9437.292ENSAMXG00000017432atxn1b9736.737Astyanax_mexicanus
ENSSMAG00000007731atxn1a9452.174ENSAMXG00000042368atxn1a9952.657Astyanax_mexicanus
ENSSMAG00000007731atxn1a9442.873ENSBTAG00000019675ATXN19942.045Bos_taurus
ENSSMAG00000007731atxn1a9441.939ENSCJAG00000006563ATXN16147.351Callithrix_jacchus
ENSSMAG00000007731atxn1a9443.622ENSCAFG00000009934ATXN19944.470Canis_familiaris
ENSSMAG00000007731atxn1a9443.900ENSCAFG00020012647ATXN19444.369Canis_lupus_dingo
ENSSMAG00000007731atxn1a9442.452ENSCHIG00000018697ATXN19941.771Capra_hircus
ENSSMAG00000007731atxn1a5457.622ENSTSYG00000000858ATXN18457.927Carlito_syrichta
ENSSMAG00000007731atxn1a9442.712ENSCAPG00000013095ATXN19942.697Cavia_aperea
ENSSMAG00000007731atxn1a9443.101ENSCPOG00000022869ATXN19943.084Cavia_porcellus
ENSSMAG00000007731atxn1a9441.714ENSCCAG00000018590ATXN16547.517Cebus_capucinus
ENSSMAG00000007731atxn1a9442.455ENSCATG00000042777ATXN19942.225Cercocebus_atys
ENSSMAG00000007731atxn1a9443.463ENSCLAG00000002212ATXN19943.959Chinchilla_lanigera
ENSSMAG00000007731atxn1a9442.551ENSCSAG00000007589ATXN19942.321Chlorocebus_sabaeus
ENSSMAG00000007731atxn1a9443.353ENSCPBG00000022373ATXN19943.519Chrysemys_picta_bellii
ENSSMAG00000007731atxn1a9442.744ENSCANG00000033673ATXN19942.514Colobus_angolensis_palliatus
ENSSMAG00000007731atxn1a9442.105ENSCGRG00001022108Atxn19942.679Cricetulus_griseus_chok1gshd
ENSSMAG00000007731atxn1a9442.494ENSCGRG00000014084Atxn19943.070Cricetulus_griseus_crigri
ENSSMAG00000007731atxn1a9441.268ENSCSEG00000004666atxn1b9740.550Cynoglossus_semilaevis
ENSSMAG00000007731atxn1a9475.333ENSCSEG00000017647atxn1a9975.333Cynoglossus_semilaevis
ENSSMAG00000007731atxn1a9440.275ENSCVAG00000010945atxn1b9740.000Cyprinodon_variegatus
ENSSMAG00000007731atxn1a9472.694ENSCVAG00000023240atxn1a9973.063Cyprinodon_variegatus
ENSSMAG00000007731atxn1a9438.933ENSDARG00000060862atxn1b9937.284Danio_rerio
ENSSMAG00000007731atxn1a9450.359ENSDARG00000061687atxn1a9950.120Danio_rerio
ENSSMAG00000007731atxn1a7051.620ENSDNOG00000048471ATXN18452.484Dasypus_novemcinctus
ENSSMAG00000007731atxn1a9442.346ENSDORG00000005940Atxn19942.873Dipodomys_ordii
ENSSMAG00000007731atxn1a7951.648ENSETEG00000003815ATXN18551.579Echinops_telfairi
ENSSMAG00000007731atxn1a9443.757ENSEASG00005011799ATXN19944.000Equus_asinus_asinus
ENSSMAG00000007731atxn1a9443.643ENSECAG00000009251ATXN19943.886Equus_caballus
ENSSMAG00000007731atxn1a9443.052ENSEEUG00000007120ATXN19943.364Erinaceus_europaeus
ENSSMAG00000007731atxn1a9451.134ENSELUG00000003691atxn1a9551.620Esox_lucius
ENSSMAG00000007731atxn1a8743.058ENSELUG00000001311atxn1b6743.159Esox_lucius
ENSSMAG00000007731atxn1a9443.398ENSFCAG00000011298ATXN19943.693Felis_catus
ENSSMAG00000007731atxn1a9443.468ENSFALG00000013400ATXN19943.764Ficedula_albicollis
ENSSMAG00000007731atxn1a8055.374ENSFDAG00000020905ATXN19852.421Fukomys_damarensis
ENSSMAG00000007731atxn1a9473.678ENSFHEG00000019419atxn1a9973.186Fundulus_heteroclitus
ENSSMAG00000007731atxn1a9439.545ENSFHEG00000017226atxn1b9739.492Fundulus_heteroclitus
ENSSMAG00000007731atxn1a9438.140ENSGMOG00000013508atxn1b6641.779Gadus_morhua
ENSSMAG00000007731atxn1a9443.649ENSGALG00000012709ATXN19943.448Gallus_gallus
ENSSMAG00000007731atxn1a9474.662ENSGAFG00000010544atxn1a9975.154Gambusia_affinis
ENSSMAG00000007731atxn1a9439.540ENSGAFG00000007295atxn1b9071.429Gambusia_affinis
ENSSMAG00000007731atxn1a9464.242ENSGACG00000003472atxn1a9864.078Gasterosteus_aculeatus
ENSSMAG00000007731atxn1a9439.260ENSGACG00000008747atxn1b9839.354Gasterosteus_aculeatus
ENSSMAG00000007731atxn1a9443.268ENSGAGG00000006868ATXN19942.972Gopherus_agassizii
ENSSMAG00000007731atxn1a9441.957ENSGGOG00000004169ATXN16447.674Gorilla_gorilla
ENSSMAG00000007731atxn1a9480.344ENSHBUG00000002508atxn1a9981.081Haplochromis_burtoni
ENSSMAG00000007731atxn1a9439.429ENSHBUG00000016081atxn1b9739.356Haplochromis_burtoni
ENSSMAG00000007731atxn1a9443.333ENSHGLG00000009360ATXN19943.333Heterocephalus_glaber_female
ENSSMAG00000007731atxn1a9443.218ENSHGLG00100003038ATXN19943.218Heterocephalus_glaber_male
ENSSMAG00000007731atxn1a9439.363ENSHCOG00000014835atxn1b9839.623Hippocampus_comes
ENSSMAG00000007731atxn1a9455.839ENSHCOG00000019032atxn1a9856.098Hippocampus_comes
ENSSMAG00000007731atxn1a9438.983ENSIPUG00000002088atxn1b9937.813Ictalurus_punctatus
ENSSMAG00000007731atxn1a9451.211ENSIPUG00000001402atxn19950.181Ictalurus_punctatus
ENSSMAG00000007731atxn1a9443.197ENSSTOG00000025423ATXN19943.394Ictidomys_tridecemlineatus
ENSSMAG00000007731atxn1a9443.038ENSJJAG00000000377Atxn19943.019Jaculus_jaculus
ENSSMAG00000007731atxn1a9440.045ENSKMAG00000013507atxn1b9839.931Kryptolebias_marmoratus
ENSSMAG00000007731atxn1a9475.523ENSKMAG00000007216atxn1a9975.031Kryptolebias_marmoratus
ENSSMAG00000007731atxn1a9439.906ENSLBEG00000024264atxn1b9739.079Labrus_bergylta
ENSSMAG00000007731atxn1a9479.412ENSLBEG00000024388atxn1a9980.025Labrus_bergylta
ENSSMAG00000007731atxn1a9445.029ENSLACG00000005371ATXN19944.900Latimeria_chalumnae
ENSSMAG00000007731atxn1a9451.817ENSLOCG00000002910atxn1a9951.348Lepisosteus_oculatus
ENSSMAG00000007731atxn1a9443.513ENSLAFG00000015231ATXN19942.693Loxodonta_africana
ENSSMAG00000007731atxn1a9441.968ENSMFAG00000032779ATXN19942.129Macaca_fascicularis
ENSSMAG00000007731atxn1a9442.081ENSMMUG00000002940ATXN19942.242Macaca_mulatta
ENSSMAG00000007731atxn1a9442.312ENSMNEG00000036667ATXN19941.968Macaca_nemestrina
ENSSMAG00000007731atxn1a7858.333ENSMLEG00000040480ATXN18854.545Mandrillus_leucophaeus
ENSSMAG00000007731atxn1a9483.681ENSMAMG00000014004atxn1a9983.436Mastacembelus_armatus
ENSSMAG00000007731atxn1a9439.545ENSMAMG00000011503atxn1b9739.171Mastacembelus_armatus
ENSSMAG00000007731atxn1a9439.636ENSMZEG00005015064atxn1b9739.471Maylandia_zebra
ENSSMAG00000007731atxn1a9480.221ENSMZEG00005003602atxn1a9980.958Maylandia_zebra
ENSSMAG00000007731atxn1a9442.379ENSMGAG00000003028ATXN19941.954Meleagris_gallopavo
ENSSMAG00000007731atxn1a9443.006ENSMAUG00000011491Atxn19942.445Mesocricetus_auratus
ENSSMAG00000007731atxn1a9443.368ENSMICG00000011875ATXN19942.711Microcebus_murinus
ENSSMAG00000007731atxn1a9443.578ENSMOCG00000001527Atxn19943.672Microtus_ochrogaster
ENSSMAG00000007731atxn1a9438.771ENSMMOG00000002884atxn1b9838.683Mola_mola
ENSSMAG00000007731atxn1a9478.676ENSMMOG00000018593atxn1a9979.044Mola_mola
ENSSMAG00000007731atxn1a9443.700ENSMODG00000010827ATXN19942.971Monodelphis_domestica
ENSSMAG00000007731atxn1a9482.577ENSMALG00000005209atxn1a9982.331Monopterus_albus
ENSSMAG00000007731atxn1a9439.701ENSMALG00000012137atxn1b9939.724Monopterus_albus
ENSSMAG00000007731atxn1a9443.858MGP_CAROLIEiJ_G0018479Atxn19942.955Mus_caroli
ENSSMAG00000007731atxn1a9443.743ENSMUSG00000046876Atxn19943.070Mus_musculus
ENSSMAG00000007731atxn1a9443.433MGP_PahariEiJ_G0019546Atxn19942.955Mus_pahari
ENSSMAG00000007731atxn1a9443.829MGP_SPRETEiJ_G0019357Atxn19943.234Mus_spretus
ENSSMAG00000007731atxn1a9443.572ENSMPUG00000005398ATXN19944.292Mustela_putorius_furo
ENSSMAG00000007731atxn1a9444.077ENSMLUG00000000896ATXN19943.721Myotis_lucifugus
ENSSMAG00000007731atxn1a9442.759ENSNGAG00000020481Atxn19943.444Nannospalax_galili
ENSSMAG00000007731atxn1a9480.590ENSNBRG00000013216atxn1a9981.572Neolamprologus_brichardi
ENSSMAG00000007731atxn1a9439.383ENSNBRG00000014776atxn1b9738.756Neolamprologus_brichardi
ENSSMAG00000007731atxn1a9441.910ENSNLEG00000001064ATXN16547.508Nomascus_leucogenys
ENSSMAG00000007731atxn1a9441.257ENSMEUG00000014680ATXN19540.525Notamacropus_eugenii
ENSSMAG00000007731atxn1a9441.590ENSOPRG00000004813ATXN19942.497Ochotona_princeps
ENSSMAG00000007731atxn1a9442.971ENSODEG00000006297ATXN19943.182Octodon_degus
ENSSMAG00000007731atxn1a9439.953ENSONIG00000003094atxn1b9939.546Oreochromis_niloticus
ENSSMAG00000007731atxn1a8334.729ENSOANG00000011866ATXN16738.879Ornithorhynchus_anatinus
ENSSMAG00000007731atxn1a9441.895ENSOCUG00000015360ATXN19942.463Oryctolagus_cuniculus
ENSSMAG00000007731atxn1a9469.865ENSORLG00000013003atxn1a9769.127Oryzias_latipes
ENSSMAG00000007731atxn1a9439.839ENSORLG00000008288atxn1b9739.468Oryzias_latipes
ENSSMAG00000007731atxn1a9439.286ENSORLG00020013514atxn1b9739.356Oryzias_latipes_hni
ENSSMAG00000007731atxn1a9470.234ENSORLG00020006722atxn1a9769.250Oryzias_latipes_hni
ENSSMAG00000007731atxn1a9439.540ENSORLG00015019876atxn1b9739.055Oryzias_latipes_hsok
ENSSMAG00000007731atxn1a9470.234ENSORLG00015014668atxn1a9769.250Oryzias_latipes_hsok
ENSSMAG00000007731atxn1a9469.335ENSOMEG00000012883atxn1a9770.197Oryzias_melastigma
ENSSMAG00000007731atxn1a9439.653ENSOMEG00000003259atxn1b9739.510Oryzias_melastigma
ENSSMAG00000007731atxn1a9443.086ENSOGAG00000028623ATXN19942.971Otolemur_garnettii
ENSSMAG00000007731atxn1a7257.407ENSOARG00000012141ATXN17857.407Ovis_aries
ENSSMAG00000007731atxn1a8946.212ENSPPAG00000028993ATXN18147.674Pan_paniscus
ENSSMAG00000007731atxn1a9447.011ENSPPRG00000004547ATXN19845.521Panthera_pardus
ENSSMAG00000007731atxn1a9441.713ENSPTRG00000039250ATXN16447.674Pan_troglodytes
ENSSMAG00000007731atxn1a9442.247ENSPANG00000024249ATXN19842.225Papio_anubis
ENSSMAG00000007731atxn1a9448.540ENSPKIG00000003054atxn1a9948.364Paramormyrops_kingsleyae
ENSSMAG00000007731atxn1a9448.100ENSPKIG00000018323atxn1b9947.557Paramormyrops_kingsleyae
ENSSMAG00000007731atxn1a7240.118ENSPSIG00000007158ATXN19239.732Pelodiscus_sinensis
ENSSMAG00000007731atxn1a9439.125ENSPMGG00000013610atxn1b9838.553Periophthalmus_magnuspinnatus
ENSSMAG00000007731atxn1a9454.192ENSPMGG00000022926atxn1a8660.000Periophthalmus_magnuspinnatus
ENSSMAG00000007731atxn1a9442.824ENSPEMG00000014930Atxn19943.184Peromyscus_maniculatus_bairdii
ENSSMAG00000007731atxn1a9444.788ENSPCIG00000019413ATXN19943.936Phascolarctos_cinereus
ENSSMAG00000007731atxn1a9475.646ENSPFOG00000014422atxn1a9975.769Poecilia_formosa
ENSSMAG00000007731atxn1a9466.872ENSPLAG00000018978atxn1a9866.872Poecilia_latipinna
ENSSMAG00000007731atxn1a8171.429ENSPLAG00000018703atxn1b9071.429Poecilia_latipinna
ENSSMAG00000007731atxn1a9475.523ENSPMEG00000002647atxn1a9975.646Poecilia_mexicana
ENSSMAG00000007731atxn1a9440.275ENSPMEG00000023723atxn1b9739.145Poecilia_mexicana
ENSSMAG00000007731atxn1a9474.662ENSPREG00000008333atxn1a9974.908Poecilia_reticulata
ENSSMAG00000007731atxn1a9440.553ENSPREG00000020308atxn1b8771.429Poecilia_reticulata
ENSSMAG00000007731atxn1a7245.593ENSPPYG00000016254ATXN16447.674Pongo_abelii
ENSSMAG00000007731atxn1a6658.537ENSPCAG00000008196ATXN15858.182Procavia_capensis
ENSSMAG00000007731atxn1a9443.757ENSPCOG00000013612ATXN19944.151Propithecus_coquereli
ENSSMAG00000007731atxn1a8647.167ENSPVAG00000016937ATXN18047.333Pteropus_vampyrus
ENSSMAG00000007731atxn1a9480.098ENSPNYG00000011920atxn1a9980.835Pundamilia_nyererei
ENSSMAG00000007731atxn1a9439.405ENSPNYG00000017095atxn1b9738.710Pundamilia_nyererei
ENSSMAG00000007731atxn1a9439.394ENSPNAG00000001226atxn1b9938.196Pygocentrus_nattereri
ENSSMAG00000007731atxn1a9454.513ENSPNAG00000010587atxn1a9954.162Pygocentrus_nattereri
ENSSMAG00000007731atxn1a9443.086ENSRNOG00000016998Atxn19942.841Rattus_norvegicus
ENSSMAG00000007731atxn1a9442.099ENSRBIG00000028213ATXN16447.342Rhinopithecus_bieti
ENSSMAG00000007731atxn1a9441.771ENSRROG00000032751ATXN16547.342Rhinopithecus_roxellana
ENSSMAG00000007731atxn1a9442.070ENSSBOG00000017381-6547.438Saimiri_boliviensis_boliviensis
ENSSMAG00000007731atxn1a9450.060ENSSFOG00015005189atxn19950.240Scleropages_formosus
ENSSMAG00000007731atxn1a9446.659ENSSFOG00015000179atxn1b9946.744Scleropages_formosus
ENSSMAG00000007731atxn1a9439.636ENSSDUG00000006990atxn1b9739.384Seriola_dumerili
ENSSMAG00000007731atxn1a9489.176ENSSDUG00000011376atxn1a9989.176Seriola_dumerili
ENSSMAG00000007731atxn1a9488.930ENSSLDG00000013505atxn1a9988.930Seriola_lalandi_dorsalis
ENSSMAG00000007731atxn1a9439.245ENSSLDG00000016306atxn1b9739.359Seriola_lalandi_dorsalis
ENSSMAG00000007731atxn1a9441.850ENSSPUG00000016650ATXN19941.522Sphenodon_punctatus
ENSSMAG00000007731atxn1a9484.275ENSSPAG00000019849atxn1a9984.152Stegastes_partitus
ENSSMAG00000007731atxn1a9440.995ENSSPAG00000003388atxn1b9741.458Stegastes_partitus
ENSSMAG00000007731atxn1a9442.792ENSSSCG00000001065ATXN19942.808Sus_scrofa
ENSSMAG00000007731atxn1a9441.753ENSTGUG00000005986ATXN19942.051Taeniopygia_guttata
ENSSMAG00000007731atxn1a9438.134ENSTRUG00000024789atxn1b9836.903Takifugu_rubripes
ENSSMAG00000007731atxn1a9469.155ENSTRUG00000014645atxn1a9968.788Takifugu_rubripes
ENSSMAG00000007731atxn1a9467.734ENSTNIG00000005089atxn1a9967.611Tetraodon_nigroviridis
ENSSMAG00000007731atxn1a9438.915ENSTNIG00000018398atxn1b9937.919Tetraodon_nigroviridis
ENSSMAG00000007731atxn1a9442.841ENSTTRG00000014678ATXN19542.021Tursiops_truncatus
ENSSMAG00000007731atxn1a9442.212ENSUAMG00000004064ATXN19942.551Ursus_americanus
ENSSMAG00000007731atxn1a5250.000ENSUMAG00000017635-9150.951Ursus_maritimus
ENSSMAG00000007731atxn1a9443.473ENSVVUG00000003386ATXN19944.432Vulpes_vulpes
ENSSMAG00000007731atxn1a9441.339ENSXETG00000014184atxn19941.136Xenopus_tropicalis
ENSSMAG00000007731atxn1a9439.209ENSXCOG00000019714atxn1b9271.429Xiphophorus_couchianus
ENSSMAG00000007731atxn1a9470.603ENSXCOG00000020061atxn1a9970.726Xiphophorus_couchianus
ENSSMAG00000007731atxn1a9440.139ENSXMAG00000014270atxn1b9171.429Xiphophorus_maculatus
ENSSMAG00000007731atxn1a9475.277ENSXMAG00000003615atxn1a9975.523Xiphophorus_maculatus

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