EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000007820 (Gene tree)
Gene ID: -
Gene Symbol: hnrnph1
Alias: zgc:77712
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4454 bases
Position: chr13:15588129-15592582
Accession: ZDB-GENE-040426-1856
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012787	zf-RNPHF	PF08080.12	4.3e-08	1	1
ENSSMAP00000012863	zf-RNPHF	PF08080.12	4.6e-08	1	1
ENSSMAP00000012787	RRM_1	PF00076.22	1.9e-30	1	3
ENSSMAP00000012787	RRM_1	PF00076.22	1.9e-30	2	3
ENSSMAP00000012787	RRM_1	PF00076.22	1.9e-30	3	3
ENSSMAP00000012863	RRM_1	PF00076.22	4.4e-30	1	3
ENSSMAP00000012863	RRM_1	PF00076.22	4.4e-30	2	3
ENSSMAP00000012863	RRM_1	PF00076.22	4.4e-30	3	3
ENSSMAP00000012796	RRM_1	PF00076.22	7.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000013032	-	1260	-	ENSSMAP00000012863	419 (aa)	-	-
ENSSMAT00000012965	-	525	-	ENSSMAP00000012796	174 (aa)	-	-
ENSSMAT00000012955	-	1212	-	ENSSMAP00000012787	403 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000007820	hnrnph1	94	61.186	ENSSMAG00000004504	hnrnph3	91	60.054
ENSSMAG00000007820	hnrnph1	85	38.889	ENSSMAG00000014181	grsf1	69	39.276

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007820	hnrnph1	96	95.538	ENSAPOG00000016614	hnrnph1	96	92.443	Acanthochromis_polyacanthus
ENSSMAG00000007820	hnrnph1	97	94.560	ENSACIG00000008964	hnrnph1	98	94.560	Amphilophus_citrinellus
ENSSMAG00000007820	hnrnph1	96	95.538	ENSAOCG00000008372	hnrnph1	96	92.443	Amphiprion_ocellaris
ENSSMAG00000007820	hnrnph1	96	95.276	ENSAPEG00000012980	hnrnph1	96	92.191	Amphiprion_percula
ENSSMAG00000007820	hnrnph1	96	95.276	ENSATEG00000002792	hnrnph1	96	92.191	Anabas_testudineus
ENSSMAG00000007820	hnrnph1	87	81.744	ENSACAG00000016323	-	80	81.744	Anolis_carolinensis
ENSSMAG00000007820	hnrnph1	88	91.643	ENSACLG00000003313	hnrnph1	97	92.758	Astatotilapia_calliptera
ENSSMAG00000007820	hnrnph1	97	86.375	ENSAMXG00000002483	hnrnph1	100	83.663	Astyanax_mexicanus
ENSSMAG00000007820	hnrnph1	97	84.115	ENSAMXG00000030703	hnrnph1l	80	83.120	Astyanax_mexicanus
ENSSMAG00000007820	hnrnph1	96	93.438	ENSCSEG00000015891	hnrnph1	96	90.932	Cynoglossus_semilaevis
ENSSMAG00000007820	hnrnph1	96	92.651	ENSCVAG00000014097	hnrnph1	96	90.176	Cyprinodon_variegatus
ENSSMAG00000007820	hnrnph1	95	86.458	ENSDARG00000005551	hnrnph1l	97	83.668	Danio_rerio
ENSSMAG00000007820	hnrnph1	98	85.347	ENSDARG00000040881	hnrnph1	95	85.455	Danio_rerio
ENSSMAG00000007820	hnrnph1	95	83.679	ENSELUG00000021437	-	99	86.010	Esox_lucius
ENSSMAG00000007820	hnrnph1	97	86.250	ENSELUG00000006715	hnrnph1	95	87.406	Esox_lucius
ENSSMAG00000007820	hnrnph1	96	91.864	ENSFHEG00000008474	hnrnph1	92	92.388	Fundulus_heteroclitus
ENSSMAG00000007820	hnrnph1	98	88.529	ENSGMOG00000006782	hnrnph1	99	88.529	Gadus_morhua
ENSSMAG00000007820	hnrnph1	96	93.701	ENSGAFG00000006280	hnrnph1	96	90.932	Gambusia_affinis
ENSSMAG00000007820	hnrnph1	97	87.010	ENSGACG00000018352	hnrnph1	96	88.161	Gasterosteus_aculeatus
ENSSMAG00000007820	hnrnph1	88	91.643	ENSHBUG00000010547	hnrnph1	98	92.758	Haplochromis_burtoni
ENSSMAG00000007820	hnrnph1	96	86.528	ENSHCOG00000004513	hnrnph1	95	88.860	Hippocampus_comes
ENSSMAG00000007820	hnrnph1	96	80.818	ENSIPUG00000024047	hnrnph1l	91	81.841	Ictalurus_punctatus
ENSSMAG00000007820	hnrnph1	90	85.556	ENSIPUG00000018262	hnrnph1	95	81.407	Ictalurus_punctatus
ENSSMAG00000007820	hnrnph1	97	92.468	ENSKMAG00000018802	hnrnph1	96	90.932	Kryptolebias_marmoratus
ENSSMAG00000007820	hnrnph1	96	95.013	ENSLBEG00000027811	hnrnph1	96	91.940	Labrus_bergylta
ENSSMAG00000007820	hnrnph1	95	82.716	ENSLOCG00000012510	hnrnph1	91	82.222	Lepisosteus_oculatus
ENSSMAG00000007820	hnrnph1	88	57.534	ENSMMUG00000017392	-	86	54.642	Macaca_mulatta
ENSSMAG00000007820	hnrnph1	88	57.534	ENSMNEG00000030544	-	86	54.642	Macaca_nemestrina
ENSSMAG00000007820	hnrnph1	89	91.057	ENSMAMG00000011478	hnrnph1	97	91.758	Mastacembelus_armatus
ENSSMAG00000007820	hnrnph1	96	93.701	ENSMZEG00005009791	hnrnph1	96	91.184	Maylandia_zebra
ENSSMAG00000007820	hnrnph1	97	93.282	ENSMMOG00000009064	hnrnph1	99	93.282	Mola_mola
ENSSMAG00000007820	hnrnph1	77	52.537	ENSMODG00000002200	-	89	53.311	Monodelphis_domestica
ENSSMAG00000007820	hnrnph1	88	90.710	ENSMALG00000003999	hnrnph1	98	93.277	Monopterus_albus
ENSSMAG00000007820	hnrnph1	88	91.643	ENSNBRG00000015406	hnrnph1	98	92.758	Neolamprologus_brichardi
ENSSMAG00000007820	hnrnph1	96	93.963	ENSONIG00000017754	hnrnph1	96	91.436	Oreochromis_niloticus
ENSSMAG00000007820	hnrnph1	96	95.276	ENSORLG00000006932	hnrnph1	95	95.276	Oryzias_latipes
ENSSMAG00000007820	hnrnph1	96	95.013	ENSORLG00020007881	hnrnph1	95	95.013	Oryzias_latipes_hni
ENSSMAG00000007820	hnrnph1	96	95.276	ENSORLG00015005306	hnrnph1	95	95.276	Oryzias_latipes_hsok
ENSSMAG00000007820	hnrnph1	96	95.013	ENSOMEG00000009827	hnrnph1	98	94.764	Oryzias_melastigma
ENSSMAG00000007820	hnrnph1	96	82.915	ENSPKIG00000009532	-	97	82.663	Paramormyrops_kingsleyae
ENSSMAG00000007820	hnrnph1	95	88.052	ENSPKIG00000018203	hnrnph1l	92	88.571	Paramormyrops_kingsleyae
ENSSMAG00000007820	hnrnph1	96	91.601	ENSPMGG00000012151	hnrnph1	96	89.169	Periophthalmus_magnuspinnatus
ENSSMAG00000007820	hnrnph1	97	92.821	ENSPFOG00000004097	hnrnph1	96	90.932	Poecilia_formosa
ENSSMAG00000007820	hnrnph1	96	93.701	ENSPLAG00000011771	hnrnph1	96	90.932	Poecilia_latipinna
ENSSMAG00000007820	hnrnph1	96	93.963	ENSPMEG00000019446	hnrnph1	96	91.184	Poecilia_mexicana
ENSSMAG00000007820	hnrnph1	96	93.963	ENSPREG00000005780	hnrnph1	97	94.479	Poecilia_reticulata
ENSSMAG00000007820	hnrnph1	96	93.701	ENSPNYG00000000204	hnrnph1	98	92.758	Pundamilia_nyererei
ENSSMAG00000007820	hnrnph1	97	86.667	ENSPNAG00000000439	hnrnph1	99	83.951	Pygocentrus_nattereri
ENSSMAG00000007820	hnrnph1	96	83.120	ENSPNAG00000002784	hnrnph1l	98	83.989	Pygocentrus_nattereri
ENSSMAG00000007820	hnrnph1	95	89.351	ENSSFOG00015022796	hnrnph1l	99	87.113	Scleropages_formosus
ENSSMAG00000007820	hnrnph1	96	86.494	ENSSFOG00015016055	-	93	87.013	Scleropages_formosus
ENSSMAG00000007820	hnrnph1	96	95.538	ENSSDUG00000008785	hnrnph1	96	92.443	Seriola_dumerili
ENSSMAG00000007820	hnrnph1	96	95.538	ENSSLDG00000010685	hnrnph1	96	92.443	Seriola_lalandi_dorsalis
ENSSMAG00000007820	hnrnph1	96	95.276	ENSSPAG00000009921	hnrnph1	96	92.191	Stegastes_partitus
ENSSMAG00000007820	hnrnph1	96	92.126	ENSTRUG00000020069	hnrnph1	96	89.673	Takifugu_rubripes
ENSSMAG00000007820	hnrnph1	94	77.250	ENSXETG00000018321	hnrnph1	83	80.220	Xenopus_tropicalis
ENSSMAG00000007820	hnrnph1	96	89.750	ENSXCOG00000009133	hnrnph1	99	91.206	Xiphophorus_couchianus
ENSSMAG00000007820	hnrnph1	97	94.026	ENSXMAG00000021332	hnrnph1	99	94.026	Xiphophorus_maculatus