EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000007834 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 26070 bases
Position: chr20:18949263-18975332
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012723	XRN_N	PF03159.18	2.5e-101	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012888	-	4997	-	ENSSMAP00000012723	980 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007834's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007834's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007834	xrn2	100	68.389	ENSG00000088930	XRN2	92	72.686	Homo_sapiens
ENSSMAG00000007834	xrn2	98	88.866	ENSAPOG00000009818	xrn2	100	88.163	Acanthochromis_polyacanthus
ENSSMAG00000007834	xrn2	100	68.997	ENSAMEG00000012581	XRN2	92	73.363	Ailuropoda_melanoleuca
ENSSMAG00000007834	xrn2	89	82.486	ENSACIG00000015047	xrn2	95	88.910	Amphilophus_citrinellus
ENSSMAG00000007834	xrn2	98	89.594	ENSAOCG00000023632	xrn2	100	88.571	Amphiprion_ocellaris
ENSSMAG00000007834	xrn2	98	89.802	ENSAPEG00000014871	xrn2	100	89.082	Amphiprion_percula
ENSSMAG00000007834	xrn2	98	88.278	ENSATEG00000001273	xrn2	99	87.863	Anabas_testudineus
ENSSMAG00000007834	xrn2	94	70.215	ENSAPLG00000013869	XRN2	90	74.881	Anas_platyrhynchos
ENSSMAG00000007834	xrn2	100	69.084	ENSACAG00000005565	XRN2	89	74.508	Anolis_carolinensis
ENSSMAG00000007834	xrn2	100	68.490	ENSANAG00000020126	XRN2	92	72.799	Aotus_nancymaae
ENSSMAG00000007834	xrn2	88	86.836	ENSACLG00000010522	xrn2	98	86.836	Astatotilapia_calliptera
ENSSMAG00000007834	xrn2	100	78.392	ENSAMXG00000018301	xrn2	92	82.774	Astyanax_mexicanus
ENSSMAG00000007834	xrn2	100	68.522	ENSBTAG00000011304	XRN2	92	72.830	Bos_taurus
ENSSMAG00000007834	xrn2	84	53.630	WBGene00006964	xrn-2	89	53.417	Caenorhabditis_elegans
ENSSMAG00000007834	xrn2	100	68.490	ENSCJAG00000005611	XRN2	92	72.686	Callithrix_jacchus
ENSSMAG00000007834	xrn2	100	68.997	ENSCAFG00000005185	XRN2	92	73.363	Canis_familiaris
ENSSMAG00000007834	xrn2	100	68.997	ENSCAFG00020027479	XRN2	92	73.363	Canis_lupus_dingo
ENSSMAG00000007834	xrn2	100	68.623	ENSCHIG00000006921	XRN2	92	72.943	Capra_hircus
ENSSMAG00000007834	xrn2	100	68.389	ENSTSYG00000008315	XRN2	92	72.686	Carlito_syrichta
ENSSMAG00000007834	xrn2	97	58.489	ENSCAPG00000010773	XRN2	87	62.740	Cavia_aperea
ENSSMAG00000007834	xrn2	100	69.098	ENSCPOG00000009407	XRN2	92	73.476	Cavia_porcellus
ENSSMAG00000007834	xrn2	100	68.490	ENSCATG00000040350	XRN2	93	72.799	Cercocebus_atys
ENSSMAG00000007834	xrn2	100	68.997	ENSCLAG00000013419	XRN2	92	73.251	Chinchilla_lanigera
ENSSMAG00000007834	xrn2	100	68.490	ENSCSAG00000011094	XRN2	92	72.799	Chlorocebus_sabaeus
ENSSMAG00000007834	xrn2	59	88.710	ENSCHOG00000013404	XRN2	63	88.710	Choloepus_hoffmanni
ENSSMAG00000007834	xrn2	100	70.101	ENSCPBG00000023533	XRN2	90	75.000	Chrysemys_picta_bellii
ENSSMAG00000007834	xrn2	84	59.431	ENSCING00000022336	-	100	60.000	Ciona_intestinalis
ENSSMAG00000007834	xrn2	84	68.981	ENSCSAVG00000011217	-	93	70.361	Ciona_savignyi
ENSSMAG00000007834	xrn2	100	68.490	ENSCANG00000040240	XRN2	92	72.799	Colobus_angolensis_palliatus
ENSSMAG00000007834	xrn2	96	70.421	ENSCGRG00001010676	Xrn2	94	73.476	Cricetulus_griseus_chok1gshd
ENSSMAG00000007834	xrn2	97	67.983	ENSCGRG00000006378	Xrn2	92	72.474	Cricetulus_griseus_crigri
ENSSMAG00000007834	xrn2	53	79.730	ENSCSEG00000005628	xrn2	100	81.081	Cynoglossus_semilaevis
ENSSMAG00000007834	xrn2	88	85.308	ENSCVAG00000018999	xrn2	98	91.794	Cyprinodon_variegatus
ENSSMAG00000007834	xrn2	100	77.300	ENSDARG00000101900	xrn2	96	87.405	Danio_rerio
ENSSMAG00000007834	xrn2	100	68.725	ENSDNOG00000001895	XRN2	92	73.055	Dasypus_novemcinctus
ENSSMAG00000007834	xrn2	100	67.680	ENSDORG00000005434	Xrn2	89	73.279	Dipodomys_ordii
ENSSMAG00000007834	xrn2	84	55.502	FBgn0031868	Rat1	88	55.662	Drosophila_melanogaster
ENSSMAG00000007834	xrn2	100	60.182	ENSETEG00000001740	XRN2	84	80.779	Echinops_telfairi
ENSSMAG00000007834	xrn2	82	68.287	ENSEBUG00000016136	xrn2	100	68.039	Eptatretus_burgeri
ENSSMAG00000007834	xrn2	100	69.301	ENSEASG00005002484	XRN2	92	73.702	Equus_asinus_asinus
ENSSMAG00000007834	xrn2	94	88.462	ENSECAG00000018988	XRN2	88	88.462	Equus_caballus
ENSSMAG00000007834	xrn2	65	92.000	ENSEEUG00000009265	XRN2	67	92.000	Erinaceus_europaeus
ENSSMAG00000007834	xrn2	100	80.948	ENSELUG00000000552	xrn2	90	84.736	Esox_lucius
ENSSMAG00000007834	xrn2	100	68.794	ENSFCAG00000007970	XRN2	92	73.138	Felis_catus
ENSSMAG00000007834	xrn2	96	70.903	ENSFALG00000004508	XRN2	90	75.463	Ficedula_albicollis
ENSSMAG00000007834	xrn2	100	68.997	ENSFDAG00000016311	XRN2	92	73.251	Fukomys_damarensis
ENSSMAG00000007834	xrn2	53	82.792	ENSFHEG00000013039	xrn2	98	82.792	Fundulus_heteroclitus
ENSSMAG00000007834	xrn2	84	82.771	ENSGMOG00000013436	xrn2	100	82.771	Gadus_morhua
ENSSMAG00000007834	xrn2	100	69.402	ENSGALG00000008372	XRN2	90	75.000	Gallus_gallus
ENSSMAG00000007834	xrn2	88	86.782	ENSGAFG00000014284	xrn2	99	86.782	Gambusia_affinis
ENSSMAG00000007834	xrn2	85	85.561	ENSGACG00000011870	xrn2	96	91.892	Gasterosteus_aculeatus
ENSSMAG00000007834	xrn2	97	71.055	ENSGAGG00000004884	XRN2	89	75.349	Gopherus_agassizii
ENSSMAG00000007834	xrn2	100	68.490	ENSGGOG00000013738	XRN2	92	72.799	Gorilla_gorilla
ENSSMAG00000007834	xrn2	53	88.269	ENSHBUG00000005077	xrn2	94	88.269	Haplochromis_burtoni
ENSSMAG00000007834	xrn2	100	67.915	ENSHGLG00000014831	XRN2	92	72.153	Heterocephalus_glaber_female
ENSSMAG00000007834	xrn2	100	67.915	ENSHGLG00100013130	XRN2	92	72.153	Heterocephalus_glaber_male
ENSSMAG00000007834	xrn2	99	82.204	ENSHCOG00000011994	xrn2	99	81.827	Hippocampus_comes
ENSSMAG00000007834	xrn2	100	77.100	ENSIPUG00000006639	xrn2	92	81.180	Ictalurus_punctatus
ENSSMAG00000007834	xrn2	100	68.997	ENSSTOG00000000589	XRN2	92	73.363	Ictidomys_tridecemlineatus
ENSSMAG00000007834	xrn2	100	69.028	ENSJJAG00000022128	Xrn2	92	73.619	Jaculus_jaculus
ENSSMAG00000007834	xrn2	53	90.734	ENSLBEG00000010041	xrn2	100	90.734	Labrus_bergylta
ENSSMAG00000007834	xrn2	92	70.238	ENSLACG00000008307	XRN2	98	74.539	Latimeria_chalumnae
ENSSMAG00000007834	xrn2	99	73.807	ENSLOCG00000016874	xrn2	93	82.390	Lepisosteus_oculatus
ENSSMAG00000007834	xrn2	100	68.997	ENSLAFG00000014624	XRN2	92	73.363	Loxodonta_africana
ENSSMAG00000007834	xrn2	100	68.490	ENSMFAG00000038122	XRN2	92	72.799	Macaca_fascicularis
ENSSMAG00000007834	xrn2	100	68.490	ENSMMUG00000011405	XRN2	92	72.799	Macaca_mulatta
ENSSMAG00000007834	xrn2	100	68.389	ENSMNEG00000040626	XRN2	92	72.686	Macaca_nemestrina
ENSSMAG00000007834	xrn2	100	68.389	ENSMLEG00000041897	XRN2	92	72.686	Mandrillus_leucophaeus
ENSSMAG00000007834	xrn2	98	87.371	ENSMAMG00000008633	xrn2	99	86.957	Mastacembelus_armatus
ENSSMAG00000007834	xrn2	88	88.799	ENSMZEG00005022362	xrn2	98	88.799	Maylandia_zebra
ENSSMAG00000007834	xrn2	97	70.042	ENSMGAG00000003196	XRN2	90	74.539	Meleagris_gallopavo
ENSSMAG00000007834	xrn2	100	69.504	ENSMAUG00000021842	Xrn2	92	73.815	Mesocricetus_auratus
ENSSMAG00000007834	xrn2	100	68.592	ENSMICG00000008126	XRN2	92	73.025	Microcebus_murinus
ENSSMAG00000007834	xrn2	100	69.028	ENSMOCG00000012588	Xrn2	92	73.506	Microtus_ochrogaster
ENSSMAG00000007834	xrn2	88	85.698	ENSMMOG00000017576	xrn2	97	85.327	Mola_mola
ENSSMAG00000007834	xrn2	100	69.534	ENSMODG00000006163	XRN2	89	75.496	Monodelphis_domestica
ENSSMAG00000007834	xrn2	89	86.833	ENSMALG00000011355	xrn2	95	91.188	Monopterus_albus
ENSSMAG00000007834	xrn2	100	68.725	MGP_CAROLIEiJ_G0024400	Xrn2	92	73.138	Mus_caroli
ENSSMAG00000007834	xrn2	100	68.927	ENSMUSG00000027433	Xrn2	92	73.363	Mus_musculus
ENSSMAG00000007834	xrn2	100	68.725	MGP_PahariEiJ_G0025843	Xrn2	92	73.138	Mus_pahari
ENSSMAG00000007834	xrn2	100	68.927	MGP_SPRETEiJ_G0025318	Xrn2	94	82.178	Mus_spretus
ENSSMAG00000007834	xrn2	100	67.729	ENSMPUG00000001198	XRN2	86	71.872	Mustela_putorius_furo
ENSSMAG00000007834	xrn2	100	68.763	ENSMLUG00000001536	XRN2	92	73.107	Myotis_lucifugus
ENSSMAG00000007834	xrn2	100	68.997	ENSNGAG00000018138	Xrn2	89	74.912	Nannospalax_galili
ENSSMAG00000007834	xrn2	88	89.133	ENSNBRG00000008062	xrn2	98	89.133	Neolamprologus_brichardi
ENSSMAG00000007834	xrn2	100	68.490	ENSNLEG00000009991	XRN2	92	72.799	Nomascus_leucogenys
ENSSMAG00000007834	xrn2	50	86.667	ENSMEUG00000008622	-	53	86.667	Notamacropus_eugenii
ENSSMAG00000007834	xrn2	76	73.158	ENSOPRG00000001397	-	63	73.158	Ochotona_princeps
ENSSMAG00000007834	xrn2	96	62.975	ENSODEG00000000860	-	91	68.166	Octodon_degus
ENSSMAG00000007834	xrn2	100	68.794	ENSODEG00000010745	-	92	73.025	Octodon_degus
ENSSMAG00000007834	xrn2	100	84.024	ENSONIG00000018720	xrn2	100	81.744	Oreochromis_niloticus
ENSSMAG00000007834	xrn2	100	69.534	ENSOANG00000015673	XRN2	90	74.798	Ornithorhynchus_anatinus
ENSSMAG00000007834	xrn2	100	68.896	ENSOCUG00000013468	XRN2	92	73.363	Oryctolagus_cuniculus
ENSSMAG00000007834	xrn2	98	83.299	ENSORLG00000017213	xrn2	99	85.617	Oryzias_latipes
ENSSMAG00000007834	xrn2	98	83.212	ENSORLG00020001824	xrn2	91	86.234	Oryzias_latipes_hni
ENSSMAG00000007834	xrn2	98	83.091	ENSORLG00015019747	xrn2	91	86.007	Oryzias_latipes_hsok
ENSSMAG00000007834	xrn2	96	82.719	ENSOMEG00000019820	xrn2	90	84.938	Oryzias_melastigma
ENSSMAG00000007834	xrn2	100	68.896	ENSOGAG00000001068	XRN2	92	73.251	Otolemur_garnettii
ENSSMAG00000007834	xrn2	97	67.983	ENSOARG00000004443	XRN2	92	72.358	Ovis_aries
ENSSMAG00000007834	xrn2	100	68.490	ENSPPAG00000033549	XRN2	92	72.799	Pan_paniscus
ENSSMAG00000007834	xrn2	100	68.794	ENSPPRG00000008732	XRN2	92	73.138	Panthera_pardus
ENSSMAG00000007834	xrn2	97	68.262	ENSPTIG00000015683	XRN2	90	72.674	Panthera_tigris_altaica
ENSSMAG00000007834	xrn2	100	68.490	ENSPTRG00000013308	XRN2	92	72.799	Pan_troglodytes
ENSSMAG00000007834	xrn2	100	68.490	ENSPANG00000018088	XRN2	92	72.799	Papio_anubis
ENSSMAG00000007834	xrn2	91	81.808	ENSPKIG00000016889	xrn2	90	83.200	Paramormyrops_kingsleyae
ENSSMAG00000007834	xrn2	79	76.031	ENSPSIG00000014666	XRN2	100	76.031	Pelodiscus_sinensis
ENSSMAG00000007834	xrn2	100	68.794	ENSPEMG00000000111	Xrn2	92	73.251	Peromyscus_maniculatus_bairdii
ENSSMAG00000007834	xrn2	100	82.944	ENSPFOG00000004182	xrn2	96	84.820	Poecilia_formosa
ENSSMAG00000007834	xrn2	88	87.011	ENSPLAG00000007351	xrn2	97	87.011	Poecilia_latipinna
ENSSMAG00000007834	xrn2	94	82.277	ENSPMEG00000011798	xrn2	96	84.234	Poecilia_mexicana
ENSSMAG00000007834	xrn2	89	87.086	ENSPREG00000012452	xrn2	99	86.750	Poecilia_reticulata
ENSSMAG00000007834	xrn2	100	68.186	ENSPPYG00000010755	XRN2	92	72.460	Pongo_abelii
ENSSMAG00000007834	xrn2	100	65.960	ENSPCAG00000011191	XRN2	92	69.966	Procavia_capensis
ENSSMAG00000007834	xrn2	100	63.019	ENSPCOG00000016468	XRN2	92	66.817	Propithecus_coquereli
ENSSMAG00000007834	xrn2	93	65.419	ENSPVAG00000004596	XRN2	85	65.419	Pteropus_vampyrus
ENSSMAG00000007834	xrn2	88	86.836	ENSPNYG00000001765	xrn2	98	86.836	Pundamilia_nyererei
ENSSMAG00000007834	xrn2	100	77.856	ENSPNAG00000010956	xrn2	92	81.564	Pygocentrus_nattereri
ENSSMAG00000007834	xrn2	100	69.028	ENSRNOG00000011785	Xrn2	92	73.476	Rattus_norvegicus
ENSSMAG00000007834	xrn2	84	75.242	ENSRBIG00000036193	XRN2	100	75.242	Rhinopithecus_bieti
ENSSMAG00000007834	xrn2	100	68.490	ENSRROG00000044400	XRN2	83	72.799	Rhinopithecus_roxellana
ENSSMAG00000007834	xrn2	68	50.990	YOR048C	RAT1	62	54.237	Saccharomyces_cerevisiae
ENSSMAG00000007834	xrn2	100	68.592	ENSSBOG00000021014	XRN2	92	72.912	Saimiri_boliviensis_boliviensis
ENSSMAG00000007834	xrn2	100	76.939	ENSSFOG00015001091	xrn2	89	83.991	Scleropages_formosus
ENSSMAG00000007834	xrn2	94	84.657	ENSSDUG00000012802	xrn2	99	88.435	Seriola_dumerili
ENSSMAG00000007834	xrn2	91	90.695	ENSSLDG00000021273	xrn2	99	91.053	Seriola_lalandi_dorsalis
ENSSMAG00000007834	xrn2	77	92.000	ENSSARG00000005859	-	54	92.000	Sorex_araneus
ENSSMAG00000007834	xrn2	97	69.643	ENSSPUG00000005485	XRN2	88	74.018	Sphenodon_punctatus
ENSSMAG00000007834	xrn2	100	87.449	ENSSPAG00000016027	xrn2	99	87.041	Stegastes_partitus
ENSSMAG00000007834	xrn2	100	67.579	ENSSSCG00000007109	XRN2	92	71.783	Sus_scrofa
ENSSMAG00000007834	xrn2	96	70.084	ENSTGUG00000007535	XRN2	90	74.309	Taeniopygia_guttata
ENSSMAG00000007834	xrn2	100	81.344	ENSTRUG00000015489	xrn2	89	85.633	Takifugu_rubripes
ENSSMAG00000007834	xrn2	100	75.755	ENSTNIG00000010712	xrn2	91	83.694	Tetraodon_nigroviridis
ENSSMAG00000007834	xrn2	100	68.592	ENSTBEG00000004119	XRN2	92	72.912	Tupaia_belangeri
ENSSMAG00000007834	xrn2	93	77.699	ENSTTRG00000009087	XRN2	85	77.699	Tursiops_truncatus
ENSSMAG00000007834	xrn2	100	68.997	ENSUAMG00000024634	XRN2	92	73.512	Ursus_americanus
ENSSMAG00000007834	xrn2	97	68.366	ENSUMAG00000004012	XRN2	87	72.791	Ursus_maritimus
ENSSMAG00000007834	xrn2	89	61.862	ENSVPAG00000010694	XRN2	73	84.142	Vicugna_pacos
ENSSMAG00000007834	xrn2	100	68.997	ENSVVUG00000012178	XRN2	92	73.363	Vulpes_vulpes
ENSSMAG00000007834	xrn2	100	69.657	ENSXETG00000023501	xrn2	93	74.775	Xenopus_tropicalis
ENSSMAG00000007834	xrn2	100	82.843	ENSXMAG00000000242	xrn2	92	88.321	Xiphophorus_maculatus