EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000007865 (Gene tree)
Gene ID: -
Gene Symbol: imp3
Alias: zgc:56526
Full Name: IMP3%2C U3 small nucleolar ribonucleoprotein%2C homolog (yeast)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 1722 bases
Position: chr7:14114610-14116331
Accession: ZDB-GENE-040426-1062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012768	S4	PF01479.25	4.3e-09	1	1
ENSSMAP00000012778	S4	PF01479.25	4.5e-09	1	1
ENSSMAP00000012778	Ribosomal_S4	PF00163.19	1.3e-08	1	1
ENSSMAP00000012768	Ribosomal_S4	PF00163.19	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000012935	-	788	-	ENSSMAP00000012768	183 (aa)	-	A0A2U9BK72
ENSSMAT00000012947	-	812	-	ENSSMAP00000012778	191 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007865's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007865's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007865	imp3	100	92.350	ENSAPOG00000014720	imp3	100	92.350	Acanthochromis_polyacanthus
ENSSMAG00000007865	imp3	100	69.565	ENSAMEG00000019247	IMP3	100	69.565	Ailuropoda_melanoleuca
ENSSMAG00000007865	imp3	98	93.855	ENSACIG00000022070	imp3	99	92.973	Amphilophus_citrinellus
ENSSMAG00000007865	imp3	100	91.803	ENSAOCG00000015761	imp3	100	91.803	Amphiprion_ocellaris
ENSSMAG00000007865	imp3	100	91.257	ENSAPEG00000005250	imp3	100	91.257	Amphiprion_percula
ENSSMAG00000007865	imp3	100	96.721	ENSATEG00000020021	imp3	100	96.721	Anabas_testudineus
ENSSMAG00000007865	imp3	100	66.845	ENSACAG00000016259	IMP3	100	66.845	Anolis_carolinensis
ENSSMAG00000007865	imp3	99	58.791	ENSANAG00000036874	-	99	58.791	Aotus_nancymaae
ENSSMAG00000007865	imp3	100	69.022	ENSANAG00000016669	-	100	69.022	Aotus_nancymaae
ENSSMAG00000007865	imp3	100	95.628	ENSACLG00000009929	imp3	100	95.628	Astatotilapia_calliptera
ENSSMAG00000007865	imp3	96	85.714	ENSAMXG00000018715	imp3	100	85.795	Astyanax_mexicanus
ENSSMAG00000007865	imp3	99	53.297	WBGene00016740	C48B6.2	99	53.297	Caenorhabditis_elegans
ENSSMAG00000007865	imp3	100	69.022	ENSCJAG00000044585	IMP3	100	69.022	Callithrix_jacchus
ENSSMAG00000007865	imp3	100	67.391	ENSCAFG00000018039	IMP3	82	67.391	Canis_familiaris
ENSSMAG00000007865	imp3	100	55.978	ENSCAFG00020006737	-	100	56.522	Canis_lupus_dingo
ENSSMAG00000007865	imp3	100	67.391	ENSCAFG00020003760	-	100	67.391	Canis_lupus_dingo
ENSSMAG00000007865	imp3	100	70.109	ENSCHIG00000006295	IMP3	100	70.109	Capra_hircus
ENSSMAG00000007865	imp3	100	69.565	ENSTSYG00000005503	IMP3	100	69.565	Carlito_syrichta
ENSSMAG00000007865	imp3	100	70.109	ENSCPOG00000012016	IMP3	100	70.109	Cavia_porcellus
ENSSMAG00000007865	imp3	100	69.022	ENSCCAG00000002712	-	100	69.022	Cebus_capucinus
ENSSMAG00000007865	imp3	98	60.556	ENSCCAG00000023378	-	99	59.770	Cebus_capucinus
ENSSMAG00000007865	imp3	100	69.565	ENSCATG00000015188	IMP3	100	69.565	Cercocebus_atys
ENSSMAG00000007865	imp3	100	69.565	ENSCSAG00000019732	IMP3	100	69.565	Chlorocebus_sabaeus
ENSSMAG00000007865	imp3	100	69.022	ENSCHOG00000012046	IMP3	100	69.022	Choloepus_hoffmanni
ENSSMAG00000007865	imp3	100	64.324	ENSCPBG00000021662	IMP3	100	64.324	Chrysemys_picta_bellii
ENSSMAG00000007865	imp3	99	65.746	ENSCING00000004233	-	100	65.746	Ciona_intestinalis
ENSSMAG00000007865	imp3	99	66.851	ENSCSAVG00000000698	-	100	66.851	Ciona_savignyi
ENSSMAG00000007865	imp3	100	69.565	ENSCANG00000018342	IMP3	100	69.565	Colobus_angolensis_palliatus
ENSSMAG00000007865	imp3	100	67.935	ENSCGRG00001001326	Imp3	100	67.935	Cricetulus_griseus_chok1gshd
ENSSMAG00000007865	imp3	100	67.935	ENSCGRG00000018907	Imp3	100	67.935	Cricetulus_griseus_crigri
ENSSMAG00000007865	imp3	99	89.011	ENSCSEG00000017200	imp3	99	89.011	Cynoglossus_semilaevis
ENSSMAG00000007865	imp3	100	81.053	ENSCVAG00000019511	imp3	100	81.053	Cyprinodon_variegatus
ENSSMAG00000007865	imp3	100	84.699	ENSDARG00000115266	imp3	100	84.699	Danio_rerio
ENSSMAG00000007865	imp3	100	67.935	ENSDNOG00000015787	IMP3	81	67.935	Dasypus_novemcinctus
ENSSMAG00000007865	imp3	100	67.935	ENSDORG00000029301	Imp3	100	67.935	Dipodomys_ordii
ENSSMAG00000007865	imp3	99	60.773	FBgn0034232	CG4866	100	60.773	Drosophila_melanogaster
ENSSMAG00000007865	imp3	100	71.196	ENSETEG00000004278	IMP3	100	71.196	Echinops_telfairi
ENSSMAG00000007865	imp3	99	71.823	ENSEBUG00000002343	imp3	99	71.823	Eptatretus_burgeri
ENSSMAG00000007865	imp3	100	69.022	ENSEASG00005015693	IMP3	100	69.022	Equus_asinus_asinus
ENSSMAG00000007865	imp3	100	69.565	ENSECAG00000015786	IMP3	100	69.565	Equus_caballus
ENSSMAG00000007865	imp3	100	87.978	ENSELUG00000023264	imp3	100	87.978	Esox_lucius
ENSSMAG00000007865	imp3	100	69.565	ENSFCAG00000040328	IMP3	100	69.565	Felis_catus
ENSSMAG00000007865	imp3	71	53.435	ENSFALG00000014811	IMP3	99	55.725	Ficedula_albicollis
ENSSMAG00000007865	imp3	100	69.565	ENSFDAG00000018422	IMP3	100	69.565	Fukomys_damarensis
ENSSMAG00000007865	imp3	100	91.803	ENSFHEG00000016954	imp3	100	91.803	Fundulus_heteroclitus
ENSSMAG00000007865	imp3	100	87.978	ENSGMOG00000018162	imp3	100	87.978	Gadus_morhua
ENSSMAG00000007865	imp3	100	55.135	ENSGALG00000040238	IMP3	100	56.757	Gallus_gallus
ENSSMAG00000007865	imp3	100	93.443	ENSGAFG00000007425	imp3	100	93.443	Gambusia_affinis
ENSSMAG00000007865	imp3	100	90.710	ENSGACG00000015998	imp3	100	90.710	Gasterosteus_aculeatus
ENSSMAG00000007865	imp3	100	63.243	ENSGAGG00000008163	IMP3	100	63.243	Gopherus_agassizii
ENSSMAG00000007865	imp3	100	69.565	ENSGGOG00000025122	IMP3	100	69.565	Gorilla_gorilla
ENSSMAG00000007865	imp3	100	95.082	ENSHBUG00000018453	imp3	100	95.082	Haplochromis_burtoni
ENSSMAG00000007865	imp3	100	69.022	ENSHGLG00000019824	IMP3	100	69.022	Heterocephalus_glaber_female
ENSSMAG00000007865	imp3	100	69.022	ENSHGLG00100020660	IMP3	100	69.022	Heterocephalus_glaber_male
ENSSMAG00000007865	imp3	100	91.803	ENSHCOG00000020565	imp3	100	91.803	Hippocampus_comes
ENSSMAG00000007865	imp3	100	85.246	ENSIPUG00000013142	imp3	100	85.246	Ictalurus_punctatus
ENSSMAG00000007865	imp3	100	70.109	ENSSTOG00000030143	IMP3	100	70.109	Ictidomys_tridecemlineatus
ENSSMAG00000007865	imp3	100	91.257	ENSKMAG00000001956	imp3	100	91.257	Kryptolebias_marmoratus
ENSSMAG00000007865	imp3	100	92.896	ENSLBEG00000008178	imp3	100	92.896	Labrus_bergylta
ENSSMAG00000007865	imp3	100	80.874	ENSLACG00000022148	imp3	100	80.874	Latimeria_chalumnae
ENSSMAG00000007865	imp3	100	83.060	ENSLOCG00000010237	imp3	100	83.060	Lepisosteus_oculatus
ENSSMAG00000007865	imp3	99	69.780	ENSLAFG00000004425	IMP3	99	69.780	Loxodonta_africana
ENSSMAG00000007865	imp3	100	69.565	ENSMFAG00000008867	IMP3	100	69.565	Macaca_fascicularis
ENSSMAG00000007865	imp3	100	69.565	ENSMMUG00000016103	IMP3	100	69.565	Macaca_mulatta
ENSSMAG00000007865	imp3	100	69.565	ENSMNEG00000026328	IMP3	100	69.565	Macaca_nemestrina
ENSSMAG00000007865	imp3	100	94.536	ENSMAMG00000003215	imp3	100	94.536	Mastacembelus_armatus
ENSSMAG00000007865	imp3	100	95.628	ENSMZEG00005005544	imp3	100	95.628	Maylandia_zebra
ENSSMAG00000007865	imp3	100	68.478	ENSMAUG00000010279	Imp3	100	68.478	Mesocricetus_auratus
ENSSMAG00000007865	imp3	100	69.565	ENSMICG00000044149	IMP3	100	69.565	Microcebus_murinus
ENSSMAG00000007865	imp3	100	67.935	ENSMOCG00000008647	Imp3	100	67.935	Microtus_ochrogaster
ENSSMAG00000007865	imp3	96	95.429	ENSMMOG00000018117	imp3	88	94.022	Mola_mola
ENSSMAG00000007865	imp3	100	69.565	ENSMODG00000025193	IMP3	100	69.565	Monodelphis_domestica
ENSSMAG00000007865	imp3	100	95.082	ENSMALG00000006505	imp3	100	95.082	Monopterus_albus
ENSSMAG00000007865	imp3	100	68.478	MGP_CAROLIEiJ_G0032258	Imp3	100	68.478	Mus_caroli
ENSSMAG00000007865	imp3	100	68.478	ENSMUSG00000032288	Imp3	100	68.478	Mus_musculus
ENSSMAG00000007865	imp3	100	68.478	MGP_PahariEiJ_G0015125	Imp3	100	68.478	Mus_pahari
ENSSMAG00000007865	imp3	100	68.478	MGP_SPRETEiJ_G0033398	Imp3	100	68.478	Mus_spretus
ENSSMAG00000007865	imp3	100	69.022	ENSMPUG00000020147	IMP3	100	69.022	Mustela_putorius_furo
ENSSMAG00000007865	imp3	100	69.565	ENSMLUG00000014032	IMP3	100	69.565	Myotis_lucifugus
ENSSMAG00000007865	imp3	100	67.391	ENSNGAG00000017248	Imp3	100	67.391	Nannospalax_galili
ENSSMAG00000007865	imp3	100	94.536	ENSNBRG00000004060	imp3	100	94.536	Neolamprologus_brichardi
ENSSMAG00000007865	imp3	100	68.478	ENSOPRG00000015906	-	100	68.478	Ochotona_princeps
ENSSMAG00000007865	imp3	100	70.109	ENSODEG00000020194	IMP3	100	70.109	Octodon_degus
ENSSMAG00000007865	imp3	100	93.443	ENSONIG00000010661	imp3	100	93.443	Oreochromis_niloticus
ENSSMAG00000007865	imp3	100	69.565	ENSOCUG00000004690	IMP3	100	69.565	Oryctolagus_cuniculus
ENSSMAG00000007865	imp3	100	92.350	ENSORLG00000004484	imp3	100	92.350	Oryzias_latipes
ENSSMAG00000007865	imp3	100	92.350	ENSORLG00020003771	imp3	100	92.350	Oryzias_latipes_hni
ENSSMAG00000007865	imp3	100	91.803	ENSORLG00015006933	imp3	100	91.803	Oryzias_latipes_hsok
ENSSMAG00000007865	imp3	100	93.443	ENSOMEG00000016160	imp3	100	93.443	Oryzias_melastigma
ENSSMAG00000007865	imp3	100	69.565	ENSOGAG00000004917	IMP3	100	69.565	Otolemur_garnettii
ENSSMAG00000007865	imp3	100	69.565	ENSPPAG00000009241	IMP3	100	69.565	Pan_paniscus
ENSSMAG00000007865	imp3	100	69.565	ENSPPRG00000018701	IMP3	100	69.565	Panthera_pardus
ENSSMAG00000007865	imp3	100	69.565	ENSPTRG00000052235	IMP3	100	69.565	Pan_troglodytes
ENSSMAG00000007865	imp3	100	69.565	ENSPANG00000013668	IMP3	100	69.565	Papio_anubis
ENSSMAG00000007865	imp3	100	86.339	ENSPKIG00000007169	imp3	100	86.339	Paramormyrops_kingsleyae
ENSSMAG00000007865	imp3	100	80.645	ENSPMGG00000009379	imp3	100	80.645	Periophthalmus_magnuspinnatus
ENSSMAG00000007865	imp3	100	67.935	ENSPEMG00000013003	Imp3	100	67.935	Peromyscus_maniculatus_bairdii
ENSSMAG00000007865	imp3	100	92.896	ENSPFOG00000016529	imp3	100	92.896	Poecilia_formosa
ENSSMAG00000007865	imp3	100	93.443	ENSPLAG00000013831	imp3	100	93.443	Poecilia_latipinna
ENSSMAG00000007865	imp3	100	92.350	ENSPMEG00000000797	imp3	100	92.350	Poecilia_mexicana
ENSSMAG00000007865	imp3	100	93.443	ENSPREG00000006885	imp3	100	93.443	Poecilia_reticulata
ENSSMAG00000007865	imp3	100	70.109	ENSPPYG00000006664	IMP3	100	70.109	Pongo_abelii
ENSSMAG00000007865	imp3	99	70.330	ENSPCAG00000006920	IMP3	99	70.330	Procavia_capensis
ENSSMAG00000007865	imp3	100	69.565	ENSPCOG00000012367	IMP3	100	69.565	Propithecus_coquereli
ENSSMAG00000007865	imp3	100	70.109	ENSPVAG00000010036	IMP3	100	70.109	Pteropus_vampyrus
ENSSMAG00000007865	imp3	100	95.628	ENSPNYG00000000324	imp3	100	95.628	Pundamilia_nyererei
ENSSMAG00000007865	imp3	100	89.617	ENSPNAG00000017113	imp3	100	89.617	Pygocentrus_nattereri
ENSSMAG00000007865	imp3	100	67.935	ENSRNOG00000017460	Imp3	100	67.935	Rattus_norvegicus
ENSSMAG00000007865	imp3	100	70.109	ENSRBIG00000024522	IMP3	100	70.109	Rhinopithecus_bieti
ENSSMAG00000007865	imp3	100	70.109	ENSRROG00000024157	IMP3	100	70.109	Rhinopithecus_roxellana
ENSSMAG00000007865	imp3	99	54.945	YHR148W	-	99	54.945	Saccharomyces_cerevisiae
ENSSMAG00000007865	imp3	99	59.890	ENSSBOG00000026404	-	99	59.890	Saimiri_boliviensis_boliviensis
ENSSMAG00000007865	imp3	100	69.022	ENSSBOG00000006542	-	100	69.022	Saimiri_boliviensis_boliviensis
ENSSMAG00000007865	imp3	99	66.484	ENSSHAG00000006200	IMP3	99	66.484	Sarcophilus_harrisii
ENSSMAG00000007865	imp3	100	86.885	ENSSFOG00015012483	imp3	100	86.885	Scleropages_formosus
ENSSMAG00000007865	imp3	100	96.175	ENSSDUG00000010594	imp3	100	96.175	Seriola_dumerili
ENSSMAG00000007865	imp3	100	96.175	ENSSLDG00000015587	imp3	100	96.175	Seriola_lalandi_dorsalis
ENSSMAG00000007865	imp3	100	69.022	ENSSARG00000009657	IMP3	100	69.022	Sorex_araneus
ENSSMAG00000007865	imp3	100	92.350	ENSSPAG00000002088	imp3	100	92.350	Stegastes_partitus
ENSSMAG00000007865	imp3	100	55.135	ENSTGUG00000013228	IMP3	100	56.757	Taeniopygia_guttata
ENSSMAG00000007865	imp3	99	91.758	ENSTRUG00000025783	imp3	99	91.758	Takifugu_rubripes
ENSSMAG00000007865	imp3	100	69.022	ENSUAMG00000022724	IMP3	100	69.022	Ursus_americanus
ENSSMAG00000007865	imp3	100	69.022	ENSUMAG00000003736	IMP3	100	69.022	Ursus_maritimus
ENSSMAG00000007865	imp3	100	66.848	ENSVVUG00000019589	IMP3	100	66.848	Vulpes_vulpes
ENSSMAG00000007865	imp3	96	94.286	ENSXCOG00000007392	imp3	98	92.778	Xiphophorus_couchianus
ENSSMAG00000007865	imp3	100	93.989	ENSXMAG00000023049	imp3	100	93.989	Xiphophorus_maculatus