EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000007922 (Gene tree)
Gene ID: -
Gene Symbol: smn1
Alias: fa12d01|smn|wu:fa12d01
Full Name: survival of motor neuron 1%2C telomeric
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4695 bases
Position: chr9:9223898-9228592
Accession: ZDB-GENE-990715-16
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012854	SMN	PF06003.12	2e-107	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000013022	-	1642	-	ENSSMAP00000012854	282 (aa)	-	A0A2U9BSK4

Gene Model

Click here to download ENSSMAG00000007922's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007922's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007922	smn1	92	50.923	ENSG00000172062	SMN1	93	49.813	Homo_sapiens
ENSSMAG00000007922	smn1	92	50.923	ENSG00000205571	SMN2	70	75.000	Homo_sapiens
ENSSMAG00000007922	smn1	100	80.919	ENSAPOG00000011324	smn1	100	80.919	Acanthochromis_polyacanthus
ENSSMAG00000007922	smn1	94	50.725	ENSAMEG00000003316	-	89	50.735	Ailuropoda_melanoleuca
ENSSMAG00000007922	smn1	60	71.598	ENSACIG00000007598	smn1	94	71.345	Amphilophus_citrinellus
ENSSMAG00000007922	smn1	93	74.809	ENSACIG00000019772	-	99	74.809	Amphilophus_citrinellus
ENSSMAG00000007922	smn1	100	80.212	ENSAOCG00000024444	smn1	100	80.212	Amphiprion_ocellaris
ENSSMAG00000007922	smn1	100	80.565	ENSAPEG00000016504	smn1	100	80.565	Amphiprion_percula
ENSSMAG00000007922	smn1	95	80.741	ENSATEG00000002182	smn1	82	78.148	Anabas_testudineus
ENSSMAG00000007922	smn1	69	51.232	ENSAPLG00000010912	-	96	41.294	Anas_platyrhynchos
ENSSMAG00000007922	smn1	98	49.470	ENSACAG00000010017	-	96	46.207	Anolis_carolinensis
ENSSMAG00000007922	smn1	96	48.276	ENSANAG00000032133	-	95	46.154	Aotus_nancymaae
ENSSMAG00000007922	smn1	99	76.678	ENSACLG00000007308	smn1	92	75.000	Astatotilapia_calliptera
ENSSMAG00000007922	smn1	100	63.732	ENSAMXG00000013884	smn1	100	63.066	Astyanax_mexicanus
ENSSMAG00000007922	smn1	94	51.449	ENSBTAG00000005743	SMN2	93	49.104	Bos_taurus
ENSSMAG00000007922	smn1	94	51.971	ENSCJAG00000016290	-	92	48.000	Callithrix_jacchus
ENSSMAG00000007922	smn1	94	52.000	ENSCAFG00000007812	SMN	93	50.368	Canis_familiaris
ENSSMAG00000007922	smn1	94	52.000	ENSCAFG00020019229	-	86	50.368	Canis_lupus_dingo
ENSSMAG00000007922	smn1	94	51.648	ENSCHIG00000015559	-	91	48.754	Capra_hircus
ENSSMAG00000007922	smn1	94	50.923	ENSTSYG00000012058	-	93	51.103	Carlito_syrichta
ENSSMAG00000007922	smn1	73	43.810	ENSCAPG00000011021	-	88	37.981	Cavia_aperea
ENSSMAG00000007922	smn1	94	48.339	ENSCPOG00000036973	-	92	49.638	Cavia_porcellus
ENSSMAG00000007922	smn1	94	47.464	ENSCPOG00000012328	-	93	48.921	Cavia_porcellus
ENSSMAG00000007922	smn1	94	47.970	ENSCCAG00000018127	-	91	47.619	Cebus_capucinus
ENSSMAG00000007922	smn1	94	51.799	ENSCATG00000037002	-	93	50.562	Cercocebus_atys
ENSSMAG00000007922	smn1	94	48.188	ENSCLAG00000000284	-	92	49.818	Chinchilla_lanigera
ENSSMAG00000007922	smn1	94	52.158	ENSCSAG00000015688	-	91	51.095	Chlorocebus_sabaeus
ENSSMAG00000007922	smn1	62	83.333	ENSCHOG00000007346	-	57	91.304	Choloepus_hoffmanni
ENSSMAG00000007922	smn1	96	51.264	ENSCPBG00000010968	-	97	46.442	Chrysemys_picta_bellii
ENSSMAG00000007922	smn1	97	46.503	ENSCANG00000033324	-	94	46.290	Colobus_angolensis_palliatus
ENSSMAG00000007922	smn1	94	52.536	ENSCANG00000038242	-	93	51.711	Colobus_angolensis_palliatus
ENSSMAG00000007922	smn1	94	50.545	ENSCGRG00001017959	-	93	48.736	Cricetulus_griseus_chok1gshd
ENSSMAG00000007922	smn1	94	39.259	ENSCGRG00001016998	-	91	38.462	Cricetulus_griseus_chok1gshd
ENSSMAG00000007922	smn1	94	50.545	ENSCGRG00000007698	Smn1	93	48.736	Cricetulus_griseus_crigri
ENSSMAG00000007922	smn1	98	65.734	ENSCSEG00000015227	smn1	100	64.211	Cynoglossus_semilaevis
ENSSMAG00000007922	smn1	100	76.761	ENSCVAG00000007498	smn1	100	77.113	Cyprinodon_variegatus
ENSSMAG00000007922	smn1	100	62.105	ENSDARG00000018494	smn1	100	56.184	Danio_rerio
ENSSMAG00000007922	smn1	82	47.303	ENSDNOG00000007283	-	86	45.161	Dasypus_novemcinctus
ENSSMAG00000007922	smn1	51	53.793	ENSDNOG00000045949	-	59	54.745	Dasypus_novemcinctus
ENSSMAG00000007922	smn1	94	42.545	ENSDORG00000007082	Smn1	90	41.852	Dipodomys_ordii
ENSSMAG00000007922	smn1	56	48.193	ENSETEG00000001406	-	60	50.000	Echinops_telfairi
ENSSMAG00000007922	smn1	96	34.797	ENSEBUG00000011902	smn1	96	35.235	Eptatretus_burgeri
ENSSMAG00000007922	smn1	89	47.287	ENSEASG00005018000	-	89	48.062	Equus_asinus_asinus
ENSSMAG00000007922	smn1	94	51.095	ENSECAG00000015215	-	93	51.825	Equus_caballus
ENSSMAG00000007922	smn1	88	49.237	ENSEEUG00000015777	-	100	45.312	Erinaceus_europaeus
ENSSMAG00000007922	smn1	100	65.957	ENSELUG00000018067	smn1	100	65.248	Esox_lucius
ENSSMAG00000007922	smn1	94	50.542	ENSFCAG00000028292	SMN	93	50.178	Felis_catus
ENSSMAG00000007922	smn1	95	53.650	ENSFALG00000012320	-	95	47.183	Ficedula_albicollis
ENSSMAG00000007922	smn1	94	43.750	ENSFDAG00000017683	-	92	46.643	Fukomys_damarensis
ENSSMAG00000007922	smn1	97	76.449	ENSFHEG00000018508	smn1	100	76.449	Fundulus_heteroclitus
ENSSMAG00000007922	smn1	100	63.958	ENSGMOG00000017279	smn1	98	62.057	Gadus_morhua
ENSSMAG00000007922	smn1	95	51.079	ENSGALG00000002430	SMN	97	47.059	Gallus_gallus
ENSSMAG00000007922	smn1	100	80.212	ENSGAFG00000009501	smn1	100	80.212	Gambusia_affinis
ENSSMAG00000007922	smn1	100	78.369	ENSGACG00000010584	smn1	97	77.660	Gasterosteus_aculeatus
ENSSMAG00000007922	smn1	96	51.264	ENSGAGG00000011374	-	95	50.709	Gopherus_agassizii
ENSSMAG00000007922	smn1	98	35.821	ENSGAGG00000013639	-	95	37.379	Gopherus_agassizii
ENSSMAG00000007922	smn1	54	58.065	ENSGGOG00000026704	-	61	61.240	Gorilla_gorilla
ENSSMAG00000007922	smn1	91	48.092	ENSGGOG00000003872	-	93	44.528	Gorilla_gorilla
ENSSMAG00000007922	smn1	100	79.152	ENSHBUG00000013987	smn1	100	76.325	Haplochromis_burtoni
ENSSMAG00000007922	smn1	94	45.387	ENSHGLG00000001905	-	94	48.540	Heterocephalus_glaber_female
ENSSMAG00000007922	smn1	94	48.201	ENSHGLG00000001018	-	92	48.551	Heterocephalus_glaber_female
ENSSMAG00000007922	smn1	94	48.201	ENSHGLG00100011252	-	92	48.551	Heterocephalus_glaber_male
ENSSMAG00000007922	smn1	92	45.283	ENSHGLG00100018676	-	96	48.507	Heterocephalus_glaber_male
ENSSMAG00000007922	smn1	94	73.208	ENSHCOG00000017136	smn1	89	70.943	Hippocampus_comes
ENSSMAG00000007922	smn1	100	61.888	ENSIPUG00000012580	smn1	89	60.490	Ictalurus_punctatus
ENSSMAG00000007922	smn1	91	51.136	ENSSTOG00000012288	-	93	50.763	Ictidomys_tridecemlineatus
ENSSMAG00000007922	smn1	59	41.916	ENSJJAG00000014853	-	91	40.110	Jaculus_jaculus
ENSSMAG00000007922	smn1	100	77.895	ENSKMAG00000007239	smn1	100	78.596	Kryptolebias_marmoratus
ENSSMAG00000007922	smn1	100	80.986	ENSLBEG00000022550	smn1	100	78.873	Labrus_bergylta
ENSSMAG00000007922	smn1	99	33.555	ENSLACG00000009808	-	95	34.483	Latimeria_chalumnae
ENSSMAG00000007922	smn1	100	52.595	ENSLOCG00000011339	smn1	100	55.749	Lepisosteus_oculatus
ENSSMAG00000007922	smn1	94	50.554	ENSLAFG00000003425	-	89	50.554	Loxodonta_africana
ENSSMAG00000007922	smn1	94	52.518	ENSMFAG00000031523	SMN1	95	50.187	Macaca_fascicularis
ENSSMAG00000007922	smn1	94	49.281	ENSMFAG00000008812	-	91	47.810	Macaca_fascicularis
ENSSMAG00000007922	smn1	94	52.518	ENSMMUG00000020214	SMN1	93	51.311	Macaca_mulatta
ENSSMAG00000007922	smn1	94	49.286	ENSMMUG00000030594	-	91	46.739	Macaca_mulatta
ENSSMAG00000007922	smn1	94	52.518	ENSMNEG00000035094	-	93	51.311	Macaca_nemestrina
ENSSMAG00000007922	smn1	74	41.176	ENSMNEG00000036423	-	70	42.308	Macaca_nemestrina
ENSSMAG00000007922	smn1	94	52.878	ENSMLEG00000041902	-	93	51.685	Mandrillus_leucophaeus
ENSSMAG00000007922	smn1	100	80.986	ENSMAMG00000011034	smn1	100	78.521	Mastacembelus_armatus
ENSSMAG00000007922	smn1	100	79.505	ENSMZEG00005013634	smn1	100	76.678	Maylandia_zebra
ENSSMAG00000007922	smn1	69	46.040	ENSMGAG00000008889	-	94	42.784	Meleagris_gallopavo
ENSSMAG00000007922	smn1	94	50.909	ENSMAUG00000010262	Smn1	93	48.736	Mesocricetus_auratus
ENSSMAG00000007922	smn1	55	58.025	ENSMICG00000034708	-	58	62.791	Microcebus_murinus
ENSSMAG00000007922	smn1	94	52.364	ENSMOCG00000017833	Smn1	93	50.181	Microtus_ochrogaster
ENSSMAG00000007922	smn1	96	68.864	ENSMMOG00000005504	smn1	98	67.626	Mola_mola
ENSSMAG00000007922	smn1	97	51.590	ENSMODG00000001436	-	95	50.360	Monodelphis_domestica
ENSSMAG00000007922	smn1	100	82.042	ENSMALG00000008025	smn1	100	79.930	Monopterus_albus
ENSSMAG00000007922	smn1	94	51.986	MGP_CAROLIEiJ_G0018836	Smn1	93	50.183	Mus_caroli
ENSSMAG00000007922	smn1	94	51.264	ENSMUSG00000021645	Smn1	93	49.110	Mus_musculus
ENSSMAG00000007922	smn1	94	51.673	MGP_PahariEiJ_G0015911	Smn1	93	51.119	Mus_pahari
ENSSMAG00000007922	smn1	94	51.264	MGP_SPRETEiJ_G0019718	Smn1	93	49.110	Mus_spretus
ENSSMAG00000007922	smn1	92	49.811	ENSMPUG00000014470	-	93	50.752	Mustela_putorius_furo
ENSSMAG00000007922	smn1	94	50.000	ENSMLUG00000010603	-	89	48.582	Myotis_lucifugus
ENSSMAG00000007922	smn1	94	49.451	ENSNGAG00000019833	Smn1	93	50.183	Nannospalax_galili
ENSSMAG00000007922	smn1	100	80.919	ENSNBRG00000023000	smn1	100	78.092	Neolamprologus_brichardi
ENSSMAG00000007922	smn1	94	49.071	ENSNLEG00000004454	-	93	50.187	Nomascus_leucogenys
ENSSMAG00000007922	smn1	67	51.031	ENSMEUG00000011393	-	88	43.902	Notamacropus_eugenii
ENSSMAG00000007922	smn1	88	50.575	ENSOPRG00000002015	-	100	49.430	Ochotona_princeps
ENSSMAG00000007922	smn1	91	50.190	ENSODEG00000015976	-	91	51.515	Octodon_degus
ENSSMAG00000007922	smn1	100	80.212	ENSONIG00000011799	smn1	100	77.739	Oreochromis_niloticus
ENSSMAG00000007922	smn1	95	47.687	ENSOANG00000001626	-	95	46.595	Ornithorhynchus_anatinus
ENSSMAG00000007922	smn1	94	42.705	ENSOCUG00000025183	-	92	41.754	Oryctolagus_cuniculus
ENSSMAG00000007922	smn1	94	53.623	ENSOCUG00000026649	-	92	45.907	Oryctolagus_cuniculus
ENSSMAG00000007922	smn1	94	54.244	ENSOCUG00000017097	-	92	45.714	Oryctolagus_cuniculus
ENSSMAG00000007922	smn1	100	77.032	ENSORLG00000010552	smn1	100	74.558	Oryzias_latipes
ENSSMAG00000007922	smn1	100	71.127	ENSORLG00020007936	smn1	100	67.958	Oryzias_latipes_hni
ENSSMAG00000007922	smn1	100	76.678	ENSORLG00015022425	smn1	100	74.205	Oryzias_latipes_hsok
ENSSMAG00000007922	smn1	100	77.032	ENSOMEG00000007824	smn1	100	74.912	Oryzias_melastigma
ENSSMAG00000007922	smn1	91	45.455	ENSOGAG00000031414	-	92	45.018	Otolemur_garnettii
ENSSMAG00000007922	smn1	94	50.000	ENSOARG00000005425	-	97	47.842	Ovis_aries
ENSSMAG00000007922	smn1	94	50.000	ENSPPAG00000036640	-	93	49.813	Pan_paniscus
ENSSMAG00000007922	smn1	94	50.542	ENSPPRG00000005575	-	93	50.178	Panthera_pardus
ENSSMAG00000007922	smn1	94	49.077	ENSPTIG00000007745	-	93	50.000	Panthera_tigris_altaica
ENSSMAG00000007922	smn1	94	50.534	ENSPTRG00000016955	-	92	49.627	Pan_troglodytes
ENSSMAG00000007922	smn1	94	49.640	ENSPANG00000000253	-	91	48.540	Papio_anubis
ENSSMAG00000007922	smn1	94	52.518	ENSPANG00000013601	-	91	51.460	Papio_anubis
ENSSMAG00000007922	smn1	100	55.401	ENSPKIG00000011096	smn1	100	50.523	Paramormyrops_kingsleyae
ENSSMAG00000007922	smn1	92	48.352	ENSPSIG00000014787	-	83	45.725	Pelodiscus_sinensis
ENSSMAG00000007922	smn1	100	68.182	ENSPMGG00000012285	smn1	100	61.953	Periophthalmus_magnuspinnatus
ENSSMAG00000007922	smn1	91	41.852	ENSPMAG00000005004	smn1	91	35.943	Petromyzon_marinus
ENSSMAG00000007922	smn1	97	53.004	ENSPCIG00000025764	-	97	50.719	Phascolarctos_cinereus
ENSSMAG00000007922	smn1	100	78.445	ENSPFOG00000007786	smn1	100	78.445	Poecilia_formosa
ENSSMAG00000007922	smn1	100	78.799	ENSPLAG00000012071	smn1	100	78.799	Poecilia_latipinna
ENSSMAG00000007922	smn1	100	78.445	ENSPMEG00000017085	smn1	100	78.445	Poecilia_mexicana
ENSSMAG00000007922	smn1	100	78.445	ENSPREG00000005824	smn1	100	78.445	Poecilia_reticulata
ENSSMAG00000007922	smn1	88	36.400	ENSPPYG00000019189	-	63	47.154	Pongo_abelii
ENSSMAG00000007922	smn1	91	47.510	ENSPPYG00000015533	-	95	48.689	Pongo_abelii
ENSSMAG00000007922	smn1	91	48.905	ENSPCAG00000004187	-	98	47.761	Procavia_capensis
ENSSMAG00000007922	smn1	59	50.867	ENSPCOG00000022307	-	55	58.678	Propithecus_coquereli
ENSSMAG00000007922	smn1	94	52.399	ENSPVAG00000005977	-	92	51.471	Pteropus_vampyrus
ENSSMAG00000007922	smn1	100	80.919	ENSPNYG00000014148	smn1	100	78.092	Pundamilia_nyererei
ENSSMAG00000007922	smn1	100	63.860	ENSPNAG00000014007	smn1	87	58.657	Pygocentrus_nattereri
ENSSMAG00000007922	smn1	94	51.449	ENSRNOG00000018067	Smn1	92	50.730	Rattus_norvegicus
ENSSMAG00000007922	smn1	97	47.482	ENSRBIG00000036775	-	93	45.985	Rhinopithecus_bieti
ENSSMAG00000007922	smn1	94	52.158	ENSRBIG00000037052	-	91	51.095	Rhinopithecus_bieti
ENSSMAG00000007922	smn1	96	50.526	ENSRROG00000039399	-	94	49.466	Rhinopithecus_roxellana
ENSSMAG00000007922	smn1	94	45.693	ENSRROG00000031088	-	50	62.500	Rhinopithecus_roxellana
ENSSMAG00000007922	smn1	94	51.273	ENSSBOG00000011665	-	91	47.970	Saimiri_boliviensis_boliviensis
ENSSMAG00000007922	smn1	97	52.650	ENSSHAG00000001499	-	98	50.562	Sarcophilus_harrisii
ENSSMAG00000007922	smn1	100	59.649	ENSSFOG00015015507	smn1	100	53.378	Scleropages_formosus
ENSSMAG00000007922	smn1	100	85.563	ENSSDUG00000018533	smn1	100	83.451	Seriola_dumerili
ENSSMAG00000007922	smn1	100	85.915	ENSSLDG00000021135	smn1	100	83.803	Seriola_lalandi_dorsalis
ENSSMAG00000007922	smn1	97	52.669	ENSSPUG00000000373	-	99	47.157	Sphenodon_punctatus
ENSSMAG00000007922	smn1	100	81.272	ENSSPAG00000004345	smn1	100	78.799	Stegastes_partitus
ENSSMAG00000007922	smn1	94	51.449	ENSSSCG00000016970	-	92	50.357	Sus_scrofa
ENSSMAG00000007922	smn1	55	69.444	ENSSSCG00000029127	-	67	71.875	Sus_scrofa
ENSSMAG00000007922	smn1	91	49.455	ENSTGUG00000001548	-	95	43.682	Taeniopygia_guttata
ENSSMAG00000007922	smn1	100	68.551	ENSTRUG00000000736	smn	100	66.312	Takifugu_rubripes
ENSSMAG00000007922	smn1	100	68.512	ENSTNIG00000009892	smn1	100	64.460	Tetraodon_nigroviridis
ENSSMAG00000007922	smn1	55	57.055	ENSTBEG00000002399	-	62	62.016	Tupaia_belangeri
ENSSMAG00000007922	smn1	94	48.699	ENSTTRG00000005080	-	91	52.239	Tursiops_truncatus
ENSSMAG00000007922	smn1	94	51.449	ENSUMAG00000007842	-	69	51.471	Ursus_maritimus
ENSSMAG00000007922	smn1	91	47.674	ENSVPAG00000009887	-	57	86.957	Vicugna_pacos
ENSSMAG00000007922	smn1	94	52.000	ENSVVUG00000006934	-	93	50.368	Vulpes_vulpes
ENSSMAG00000007922	smn1	95	53.846	ENSXETG00000018189	smn2	95	53.025	Xenopus_tropicalis
ENSSMAG00000007922	smn1	87	33.333	ENSXETG00000004912	-	82	56.897	Xenopus_tropicalis
ENSSMAG00000007922	smn1	100	78.092	ENSXMAG00000001521	smn1	100	78.092	Xiphophorus_maculatus