EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000007933 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10777 bases
Position: chr20:19047598-19058374
Accession: ZDB-GENE-040426-694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012881	HAT	PF02184.16	7.1e-35	1	2
ENSSMAP00000012881	HAT	PF02184.16	7.1e-35	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000013050	-	6084	-	ENSSMAP00000012881	772 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000007933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007933's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007933	crnkl1	89	84.548	ENSG00000101343	CRNKL1	99	84.548	Homo_sapiens
ENSSMAG00000007933	crnkl1	100	89.793	ENSAPOG00000009705	crnkl1	98	93.988	Acanthochromis_polyacanthus
ENSSMAG00000007933	crnkl1	86	86.747	ENSAMEG00000000270	CRNKL1	81	86.846	Ailuropoda_melanoleuca
ENSSMAG00000007933	crnkl1	94	87.106	ENSACIG00000015267	crnkl1	95	87.106	Amphilophus_citrinellus
ENSSMAG00000007933	crnkl1	100	89.637	ENSAOCG00000021964	crnkl1	95	91.507	Amphiprion_ocellaris
ENSSMAG00000007933	crnkl1	100	89.290	ENSAPEG00000015041	crnkl1	95	91.644	Amphiprion_percula
ENSSMAG00000007933	crnkl1	100	85.696	ENSATEG00000001068	crnkl1	94	88.219	Anabas_testudineus
ENSSMAG00000007933	crnkl1	87	84.250	ENSAPLG00000013105	CRNKL1	99	82.824	Anas_platyrhynchos
ENSSMAG00000007933	crnkl1	89	85.735	ENSACAG00000005284	CRNKL1	100	85.735	Anolis_carolinensis
ENSSMAG00000007933	crnkl1	82	85.737	ENSANAG00000024889	CRNKL1	99	85.737	Aotus_nancymaae
ENSSMAG00000007933	crnkl1	95	87.858	ENSACLG00000010813	crnkl1	95	87.755	Astatotilapia_calliptera
ENSSMAG00000007933	crnkl1	96	84.688	ENSAMXG00000018334	crnkl1	100	84.253	Astyanax_mexicanus
ENSSMAG00000007933	crnkl1	89	84.660	ENSBTAG00000008472	CRNKL1	98	85.174	Bos_taurus
ENSSMAG00000007933	crnkl1	83	63.354	WBGene00019762	M03F8.3	89	63.459	Caenorhabditis_elegans
ENSSMAG00000007933	crnkl1	89	84.548	ENSCJAG00000005393	CRNKL1	99	84.548	Callithrix_jacchus
ENSSMAG00000007933	crnkl1	86	86.486	ENSCAFG00000005333	CRNKL1	94	85.359	Canis_familiaris
ENSSMAG00000007933	crnkl1	87	86.587	ENSCAFG00020027488	CRNKL1	99	85.359	Canis_lupus_dingo
ENSSMAG00000007933	crnkl1	89	83.936	ENSCHIG00000013171	CRNKL1	99	84.402	Capra_hircus
ENSSMAG00000007933	crnkl1	89	84.548	ENSTSYG00000004197	CRNKL1	99	84.548	Carlito_syrichta
ENSSMAG00000007933	crnkl1	83	81.994	ENSCAPG00000010501	CRNKL1	99	81.994	Cavia_aperea
ENSSMAG00000007933	crnkl1	89	83.819	ENSCPOG00000004418	CRNKL1	99	83.819	Cavia_porcellus
ENSSMAG00000007933	crnkl1	89	84.694	ENSCCAG00000027037	CRNKL1	99	84.694	Cebus_capucinus
ENSSMAG00000007933	crnkl1	89	84.402	ENSCATG00000034247	CRNKL1	99	84.402	Cercocebus_atys
ENSSMAG00000007933	crnkl1	87	85.544	ENSCLAG00000013859	CRNKL1	99	84.334	Chinchilla_lanigera
ENSSMAG00000007933	crnkl1	89	84.402	ENSCSAG00000011434	CRNKL1	99	84.402	Chlorocebus_sabaeus
ENSSMAG00000007933	crnkl1	86	85.994	ENSCHOG00000006371	CRNKL1	82	86.099	Choloepus_hoffmanni
ENSSMAG00000007933	crnkl1	89	86.257	ENSCPBG00000023501	CRNKL1	99	86.257	Chrysemys_picta_bellii
ENSSMAG00000007933	crnkl1	86	67.970	ENSCING00000002709	-	99	66.569	Ciona_intestinalis
ENSSMAG00000007933	crnkl1	89	84.402	ENSCANG00000038789	CRNKL1	99	84.402	Colobus_angolensis_palliatus
ENSSMAG00000007933	crnkl1	87	85.842	ENSCGRG00001001115	-	99	84.627	Cricetulus_griseus_chok1gshd
ENSSMAG00000007933	crnkl1	87	85.842	ENSCGRG00001000687	-	99	84.627	Cricetulus_griseus_chok1gshd
ENSSMAG00000007933	crnkl1	87	85.842	ENSCGRG00000007854	Crnkl1	99	84.627	Cricetulus_griseus_crigri
ENSSMAG00000007933	crnkl1	97	85.583	ENSCSEG00000005594	crnkl1	96	85.770	Cynoglossus_semilaevis
ENSSMAG00000007933	crnkl1	87	93.274	ENSCVAG00000015172	crnkl1	96	88.583	Cyprinodon_variegatus
ENSSMAG00000007933	crnkl1	86	90.964	ENSDARG00000007901	crnkl1	92	88.841	Danio_rerio
ENSSMAG00000007933	crnkl1	87	86.289	ENSDNOG00000016226	CRNKL1	95	85.066	Dasypus_novemcinctus
ENSSMAG00000007933	crnkl1	87	83.900	ENSDORG00000000394	-	99	82.729	Dipodomys_ordii
ENSSMAG00000007933	crnkl1	86	79.429	ENSDORG00000023724	-	98	79.429	Dipodomys_ordii
ENSSMAG00000007933	crnkl1	86	78.593	ENSDORG00000030174	-	99	78.593	Dipodomys_ordii
ENSSMAG00000007933	crnkl1	86	69.254	FBgn0000377	crn	98	68.023	Drosophila_melanogaster
ENSSMAG00000007933	crnkl1	87	75.785	ENSETEG00000003711	CRNKL1	82	75.785	Echinops_telfairi
ENSSMAG00000007933	crnkl1	91	59.459	ENSEBUG00000013461	crnkl1	96	55.556	Eptatretus_burgeri
ENSSMAG00000007933	crnkl1	87	86.587	ENSEASG00005002072	CRNKL1	99	85.359	Equus_asinus_asinus
ENSSMAG00000007933	crnkl1	87	86.587	ENSECAG00000022215	CRNKL1	99	85.359	Equus_caballus
ENSSMAG00000007933	crnkl1	86	83.784	ENSEEUG00000000413	CRNKL1	90	83.905	Erinaceus_europaeus
ENSSMAG00000007933	crnkl1	87	91.617	ENSELUG00000015424	crnkl1	97	89.927	Esox_lucius
ENSSMAG00000007933	crnkl1	87	86.587	ENSFCAG00000000714	CRNKL1	99	85.359	Felis_catus
ENSSMAG00000007933	crnkl1	87	84.328	ENSFALG00000004611	CRNKL1	99	84.328	Ficedula_albicollis
ENSSMAG00000007933	crnkl1	90	83.718	ENSFDAG00000000604	CRNKL1	99	84.627	Fukomys_damarensis
ENSSMAG00000007933	crnkl1	100	84.974	ENSFHEG00000013163	crnkl1	93	88.658	Fundulus_heteroclitus
ENSSMAG00000007933	crnkl1	87	89.985	ENSGMOG00000007609	crnkl1	94	88.743	Gadus_morhua
ENSSMAG00000007933	crnkl1	89	85.234	ENSGALG00000008429	CRNKL1	99	85.234	Gallus_gallus
ENSSMAG00000007933	crnkl1	87	93.304	ENSGAFG00000014249	crnkl1	93	89.028	Gambusia_affinis
ENSSMAG00000007933	crnkl1	93	88.981	ENSGACG00000011852	crnkl1	98	87.686	Gasterosteus_aculeatus
ENSSMAG00000007933	crnkl1	85	84.862	ENSGAGG00000021233	CRNKL1	99	84.862	Gopherus_agassizii
ENSSMAG00000007933	crnkl1	89	84.548	ENSGGOG00000014176	CRNKL1	99	84.548	Gorilla_gorilla
ENSSMAG00000007933	crnkl1	100	85.770	ENSHBUG00000005246	crnkl1	95	87.891	Haplochromis_burtoni
ENSSMAG00000007933	crnkl1	89	84.402	ENSHGLG00000010856	CRNKL1	99	84.402	Heterocephalus_glaber_female
ENSSMAG00000007933	crnkl1	89	84.402	ENSHGLG00100011521	CRNKL1	99	84.402	Heterocephalus_glaber_male
ENSSMAG00000007933	crnkl1	87	91.168	ENSHCOG00000006420	crnkl1	99	88.841	Hippocampus_comes
ENSSMAG00000007933	crnkl1	82	70.440	ENSIPUG00000000315	-	99	71.541	Ictalurus_punctatus
ENSSMAG00000007933	crnkl1	86	76.958	ENSIPUG00000006836	-	98	76.602	Ictalurus_punctatus
ENSSMAG00000007933	crnkl1	84	89.077	ENSIPUG00000006751	crnkl1	93	87.463	Ictalurus_punctatus
ENSSMAG00000007933	crnkl1	89	84.548	ENSSTOG00000014747	CRNKL1	99	84.548	Ictidomys_tridecemlineatus
ENSSMAG00000007933	crnkl1	87	83.988	ENSJJAG00000016926	Crnkl1	99	82.621	Jaculus_jaculus
ENSSMAG00000007933	crnkl1	92	90.806	ENSKMAG00000003620	crnkl1	99	84.903	Kryptolebias_marmoratus
ENSSMAG00000007933	crnkl1	87	75.852	ENSLBEG00000003543	crnkl1	93	75.289	Labrus_bergylta
ENSSMAG00000007933	crnkl1	87	87.240	ENSLACG00000001129	CRNKL1	98	87.240	Latimeria_chalumnae
ENSSMAG00000007933	crnkl1	86	90.691	ENSLOCG00000016889	crnkl1	96	88.439	Lepisosteus_oculatus
ENSSMAG00000007933	crnkl1	89	84.279	ENSLAFG00000004512	CRNKL1	99	85.007	Loxodonta_africana
ENSSMAG00000007933	crnkl1	89	84.402	ENSMFAG00000039893	CRNKL1	99	84.402	Macaca_fascicularis
ENSSMAG00000007933	crnkl1	89	84.402	ENSMMUG00000007709	CRNKL1	99	84.402	Macaca_mulatta
ENSSMAG00000007933	crnkl1	89	84.402	ENSMNEG00000037490	CRNKL1	99	84.402	Macaca_nemestrina
ENSSMAG00000007933	crnkl1	89	84.402	ENSMLEG00000034885	CRNKL1	99	84.402	Mandrillus_leucophaeus
ENSSMAG00000007933	crnkl1	94	88.996	ENSMAMG00000008757	crnkl1	94	88.721	Mastacembelus_armatus
ENSSMAG00000007933	crnkl1	100	85.640	ENSMZEG00005022345	crnkl1	100	85.548	Maylandia_zebra
ENSSMAG00000007933	crnkl1	89	84.818	ENSMGAG00000003452	CRNKL1	94	84.818	Meleagris_gallopavo
ENSSMAG00000007933	crnkl1	87	86.099	ENSMAUG00000020764	Crnkl1	99	84.627	Mesocricetus_auratus
ENSSMAG00000007933	crnkl1	89	84.548	ENSMICG00000006048	CRNKL1	99	84.548	Microcebus_murinus
ENSSMAG00000007933	crnkl1	87	77.974	ENSMOCG00000000681	-	99	76.691	Microtus_ochrogaster
ENSSMAG00000007933	crnkl1	86	61.203	ENSMOCG00000004179	-	96	60.889	Microtus_ochrogaster
ENSSMAG00000007933	crnkl1	82	90.205	ENSMMOG00000017601	crnkl1	97	90.205	Mola_mola
ENSSMAG00000007933	crnkl1	89	79.300	ENSMODG00000010857	-	99	79.300	Monodelphis_domestica
ENSSMAG00000007933	crnkl1	89	82.446	ENSMODG00000005961	-	99	82.446	Monodelphis_domestica
ENSSMAG00000007933	crnkl1	94	63.786	ENSMALG00000011211	crnkl1	94	65.663	Monopterus_albus
ENSSMAG00000007933	crnkl1	87	86.398	MGP_CAROLIEiJ_G0024394	Crnkl1	97	86.398	Mus_caroli
ENSSMAG00000007933	crnkl1	87	86.398	ENSMUSG00000001767	Crnkl1	97	86.398	Mus_musculus
ENSSMAG00000007933	crnkl1	87	85.052	MGP_PahariEiJ_G0025838	Crnkl1	97	85.052	Mus_pahari
ENSSMAG00000007933	crnkl1	87	86.398	MGP_SPRETEiJ_G0025312	Crnkl1	97	86.398	Mus_spretus
ENSSMAG00000007933	crnkl1	87	86.587	ENSMPUG00000001226	CRNKL1	99	85.359	Mustela_putorius_furo
ENSSMAG00000007933	crnkl1	86	86.316	ENSMLUG00000016513	CRNKL1	87	86.418	Myotis_lucifugus
ENSSMAG00000007933	crnkl1	89	82.260	ENSNGAG00000023097	Crnkl1	99	82.260	Nannospalax_galili
ENSSMAG00000007933	crnkl1	95	88.131	ENSNBRG00000007867	crnkl1	95	87.755	Neolamprologus_brichardi
ENSSMAG00000007933	crnkl1	89	81.487	ENSNLEG00000009862	CRNKL1	99	81.487	Nomascus_leucogenys
ENSSMAG00000007933	crnkl1	85	86.585	ENSMEUG00000012167	-	98	86.585	Notamacropus_eugenii
ENSSMAG00000007933	crnkl1	88	80.707	ENSMEUG00000002361	-	98	80.707	Notamacropus_eugenii
ENSSMAG00000007933	crnkl1	77	58.541	ENSOPRG00000009242	-	62	58.541	Ochotona_princeps
ENSSMAG00000007933	crnkl1	87	85.544	ENSODEG00000012175	CRNKL1	99	84.334	Octodon_degus
ENSSMAG00000007933	crnkl1	95	88.131	ENSONIG00000018728	crnkl1	95	87.755	Oreochromis_niloticus
ENSSMAG00000007933	crnkl1	88	83.895	ENSOCUG00000015484	CRNKL1	83	84.593	Oryctolagus_cuniculus
ENSSMAG00000007933	crnkl1	100	84.217	ENSORLG00000017240	crnkl1	96	88.039	Oryzias_latipes
ENSSMAG00000007933	crnkl1	100	84.088	ENSORLG00020001742	crnkl1	95	87.500	Oryzias_latipes_hni
ENSSMAG00000007933	crnkl1	100	85.104	ENSORLG00015019564	crnkl1	95	87.775	Oryzias_latipes_hsok
ENSSMAG00000007933	crnkl1	95	87.568	ENSOMEG00000019895	crnkl1	96	87.158	Oryzias_melastigma
ENSSMAG00000007933	crnkl1	89	84.402	ENSOGAG00000011544	CRNKL1	99	84.402	Otolemur_garnettii
ENSSMAG00000007933	crnkl1	89	84.840	ENSOARG00000002150	CRNKL1	89	85.423	Ovis_aries
ENSSMAG00000007933	crnkl1	88	83.407	ENSPPAG00000027847	CRNKL1	83	83.528	Pan_paniscus
ENSSMAG00000007933	crnkl1	87	86.587	ENSPPRG00000001955	CRNKL1	99	85.359	Panthera_pardus
ENSSMAG00000007933	crnkl1	87	86.587	ENSPTIG00000007393	CRNKL1	99	85.359	Panthera_tigris_altaica
ENSSMAG00000007933	crnkl1	89	84.548	ENSPTRG00000030609	CRNKL1	99	84.548	Pan_troglodytes
ENSSMAG00000007933	crnkl1	89	84.402	ENSPANG00000017420	CRNKL1	99	84.402	Papio_anubis
ENSSMAG00000007933	crnkl1	96	79.919	ENSPKIG00000017093	crnkl1	95	80.759	Paramormyrops_kingsleyae
ENSSMAG00000007933	crnkl1	88	84.728	ENSPSIG00000012705	CRNKL1	99	84.728	Pelodiscus_sinensis
ENSSMAG00000007933	crnkl1	91	82.219	ENSPMGG00000006263	crnkl1	96	83.480	Periophthalmus_magnuspinnatus
ENSSMAG00000007933	crnkl1	87	86.140	ENSPEMG00000000073	-	99	84.919	Peromyscus_maniculatus_bairdii
ENSSMAG00000007933	crnkl1	88	81.287	ENSPMAG00000002250	crnkl1	98	81.287	Petromyzon_marinus
ENSSMAG00000007933	crnkl1	87	86.140	ENSPCIG00000025825	CRNKL1	94	86.140	Phascolarctos_cinereus
ENSSMAG00000007933	crnkl1	87	93.155	ENSPFOG00000005102	crnkl1	98	86.910	Poecilia_formosa
ENSSMAG00000007933	crnkl1	87	93.155	ENSPLAG00000007288	crnkl1	94	87.636	Poecilia_latipinna
ENSSMAG00000007933	crnkl1	98	86.074	ENSPMEG00000008865	crnkl1	99	86.623	Poecilia_mexicana
ENSSMAG00000007933	crnkl1	87	93.572	ENSPREG00000012615	crnkl1	98	87.364	Poecilia_reticulata
ENSSMAG00000007933	crnkl1	88	84.288	ENSPPYG00000010747	CRNKL1	81	84.402	Pongo_abelii
ENSSMAG00000007933	crnkl1	88	80.588	ENSPCAG00000003296	CRNKL1	85	80.730	Procavia_capensis
ENSSMAG00000007933	crnkl1	88	83.260	ENSPCOG00000017608	CRNKL1	83	83.382	Propithecus_coquereli
ENSSMAG00000007933	crnkl1	86	86.596	ENSPVAG00000006207	CRNKL1	83	84.985	Pteropus_vampyrus
ENSSMAG00000007933	crnkl1	95	87.722	ENSPNYG00000001977	crnkl1	95	87.619	Pundamilia_nyererei
ENSSMAG00000007933	crnkl1	87	91.168	ENSPNAG00000001507	crnkl1	98	86.047	Pygocentrus_nattereri
ENSSMAG00000007933	crnkl1	87	86.398	ENSRNOG00000010587	Crnkl1	97	86.398	Rattus_norvegicus
ENSSMAG00000007933	crnkl1	87	86.248	ENSRNOG00000040045	Crnkl1	97	86.248	Rattus_norvegicus
ENSSMAG00000007933	crnkl1	89	84.402	ENSRBIG00000031770	CRNKL1	99	84.402	Rhinopithecus_bieti
ENSSMAG00000007933	crnkl1	89	84.548	ENSRROG00000040450	CRNKL1	99	84.548	Rhinopithecus_roxellana
ENSSMAG00000007933	crnkl1	84	36.720	YLR117C	CLF1	99	36.812	Saccharomyces_cerevisiae
ENSSMAG00000007933	crnkl1	89	84.548	ENSSBOG00000029672	CRNKL1	99	84.548	Saimiri_boliviensis_boliviensis
ENSSMAG00000007933	crnkl1	85	69.453	ENSSHAG00000011199	CRNKL1	99	69.453	Sarcophilus_harrisii
ENSSMAG00000007933	crnkl1	86	90.361	ENSSFOG00015000946	crnkl1	89	89.197	Scleropages_formosus
ENSSMAG00000007933	crnkl1	93	83.518	ENSSDUG00000012625	crnkl1	92	83.220	Seriola_dumerili
ENSSMAG00000007933	crnkl1	96	89.986	ENSSLDG00000021413	crnkl1	93	90.301	Seriola_lalandi_dorsalis
ENSSMAG00000007933	crnkl1	87	85.800	ENSSARG00000006443	CRNKL1	80	85.800	Sorex_araneus
ENSSMAG00000007933	crnkl1	89	85.298	ENSSPUG00000005254	CRNKL1	100	85.298	Sphenodon_punctatus
ENSSMAG00000007933	crnkl1	94	91.644	ENSSPAG00000016150	crnkl1	93	91.233	Stegastes_partitus
ENSSMAG00000007933	crnkl1	91	84.165	ENSSSCG00000038587	CRNKL1	99	85.131	Sus_scrofa
ENSSMAG00000007933	crnkl1	89	84.964	ENSTGUG00000007645	CRNKL1	98	84.964	Taeniopygia_guttata
ENSSMAG00000007933	crnkl1	87	85.119	ENSTRUG00000015417	crnkl1	91	83.768	Takifugu_rubripes
ENSSMAG00000007933	crnkl1	87	89.552	ENSTNIG00000010710	crnkl1	99	88.210	Tetraodon_nigroviridis
ENSSMAG00000007933	crnkl1	81	84.345	ENSTBEG00000001304	CRNKL1	82	84.469	Tupaia_belangeri
ENSSMAG00000007933	crnkl1	81	82.109	ENSTTRG00000000484	CRNKL1	81	82.250	Tursiops_truncatus
ENSSMAG00000007933	crnkl1	87	86.587	ENSUAMG00000018586	CRNKL1	99	85.359	Ursus_americanus
ENSSMAG00000007933	crnkl1	87	86.587	ENSUMAG00000024957	CRNKL1	99	85.359	Ursus_maritimus
ENSSMAG00000007933	crnkl1	86	86.747	ENSVVUG00000012559	CRNKL1	80	86.846	Vulpes_vulpes
ENSSMAG00000007933	crnkl1	88	86.156	ENSXETG00000009698	crnkl1	99	85.546	Xenopus_tropicalis
ENSSMAG00000007933	crnkl1	87	92.125	ENSXCOG00000000824	crnkl1	98	86.703	Xiphophorus_couchianus
ENSSMAG00000007933	crnkl1	87	93.155	ENSXMAG00000006896	crnkl1	98	87.500	Xiphophorus_maculatus