EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000007977 (Gene tree)
Gene ID: -
Gene Symbol: cth1
Alias: cb266|fa18c01|wu:fa18c01|zfcth1
Full Name: cysteine three histidine 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3331 bases
Position: chr1:5769861-5773191
Accession: ZDB-GENE-990806-20
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000012939	zf-CCCH	PF00642.24	6.5e-31	1	4
ENSSMAP00000012939	zf-CCCH	PF00642.24	6.5e-31	2	4
ENSSMAP00000012939	zf-CCCH	PF00642.24	6.5e-31	3	4
ENSSMAP00000012939	zf-CCCH	PF00642.24	6.5e-31	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000013108	-	2567	-	ENSSMAP00000012939	321 (aa)	-	A0A2U9AVT8

Gene Model

Click here to download ENSSMAG00000007977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000007977's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000007977	cth1	90	71.280	ENSAPOG00000012552	cth1	95	71.626	Acanthochromis_polyacanthus
ENSSMAG00000007977	cth1	88	67.138	ENSACIG00000016026	cth1	99	63.467	Amphilophus_citrinellus
ENSSMAG00000007977	cth1	100	74.143	ENSAOCG00000001644	cth1	100	75.389	Amphiprion_ocellaris
ENSSMAG00000007977	cth1	100	74.143	ENSAPEG00000008930	cth1	100	75.389	Amphiprion_percula
ENSSMAG00000007977	cth1	99	79.630	ENSATEG00000002281	cth1	97	78.704	Anabas_testudineus
ENSSMAG00000007977	cth1	90	63.668	ENSACLG00000015353	cth1	95	59.516	Astatotilapia_calliptera
ENSSMAG00000007977	cth1	97	57.538	ENSAMXG00000025717	cth1	92	57.705	Astyanax_mexicanus
ENSSMAG00000007977	cth1	100	75.926	ENSCSEG00000014617	cth1	100	75.926	Cynoglossus_semilaevis
ENSSMAG00000007977	cth1	100	59.938	ENSCVAG00000001680	cth1	65	60.559	Cyprinodon_variegatus
ENSSMAG00000007977	cth1	91	58.804	ENSDARG00000057328	cth1	90	58.333	Danio_rerio
ENSSMAG00000007977	cth1	99	59.357	ENSELUG00000012738	cth1	99	55.786	Esox_lucius
ENSSMAG00000007977	cth1	100	63.551	ENSFHEG00000022665	cth1	100	60.748	Fundulus_heteroclitus
ENSSMAG00000007977	cth1	99	64.308	ENSGMOG00000007360	cth1	100	63.077	Gadus_morhua
ENSSMAG00000007977	cth1	100	62.928	ENSGAFG00000019288	cth1	100	59.259	Gambusia_affinis
ENSSMAG00000007977	cth1	99	70.000	ENSGACG00000000802	cth1	99	66.875	Gasterosteus_aculeatus
ENSSMAG00000007977	cth1	100	64.486	ENSHBUG00000014400	cth1	100	60.748	Haplochromis_burtoni
ENSSMAG00000007977	cth1	99	53.560	ENSHCOG00000010276	cth1	99	50.779	Hippocampus_comes
ENSSMAG00000007977	cth1	97	58.282	ENSIPUG00000018040	cth1	90	57.237	Ictalurus_punctatus
ENSSMAG00000007977	cth1	100	65.231	ENSKMAG00000005944	cth1	100	65.231	Kryptolebias_marmoratus
ENSSMAG00000007977	cth1	100	79.817	ENSLBEG00000019253	cth1	100	80.495	Labrus_bergylta
ENSSMAG00000007977	cth1	73	50.230	ENSLOCG00000002047	cth1	98	50.230	Lepisosteus_oculatus
ENSSMAG00000007977	cth1	99	60.526	ENSMAMG00000001525	cth1	65	68.980	Mastacembelus_armatus
ENSSMAG00000007977	cth1	100	64.486	ENSMZEG00005022335	cth1	100	60.748	Maylandia_zebra
ENSSMAG00000007977	cth1	94	75.578	ENSMMOG00000020518	cth1	100	75.578	Mola_mola
ENSSMAG00000007977	cth1	100	62.500	ENSMALG00000020738	cth1	58	75.676	Monopterus_albus
ENSSMAG00000007977	cth1	88	62.676	ENSNBRG00000022789	cth1	83	60.517	Neolamprologus_brichardi
ENSSMAG00000007977	cth1	99	66.250	ENSONIG00000021318	cth1	99	62.500	Oreochromis_niloticus
ENSSMAG00000007977	cth1	100	60.559	ENSORLG00000022847	cth1	100	59.259	Oryzias_latipes
ENSSMAG00000007977	cth1	100	60.671	ENSORLG00020011979	cth1	100	59.202	Oryzias_latipes_hni
ENSSMAG00000007977	cth1	100	60.870	ENSORLG00015013084	cth1	100	59.568	Oryzias_latipes_hsok
ENSSMAG00000007977	cth1	100	57.585	ENSOMEG00000005809	cth1	85	56.211	Oryzias_melastigma
ENSSMAG00000007977	cth1	99	75.309	ENSPMGG00000004275	cth1	100	75.309	Periophthalmus_magnuspinnatus
ENSSMAG00000007977	cth1	100	66.667	ENSPFOG00000013583	cth1	94	62.928	Poecilia_formosa
ENSSMAG00000007977	cth1	100	66.667	ENSPLAG00000018158	cth1	94	62.928	Poecilia_latipinna
ENSSMAG00000007977	cth1	100	66.355	ENSPMEG00000005744	cth1	100	62.928	Poecilia_mexicana
ENSSMAG00000007977	cth1	99	64.688	ENSPREG00000004099	cth1	100	61.250	Poecilia_reticulata
ENSSMAG00000007977	cth1	91	62.887	ENSPNYG00000016705	cth1	85	57.407	Pundamilia_nyererei
ENSSMAG00000007977	cth1	99	55.030	ENSPNAG00000013147	cth1	90	55.776	Pygocentrus_nattereri
ENSSMAG00000007977	cth1	86	57.042	ENSSFOG00015017190	cth1	55	67.033	Scleropages_formosus
ENSSMAG00000007977	cth1	100	82.012	ENSSDUG00000004321	cth1	100	83.537	Seriola_dumerili
ENSSMAG00000007977	cth1	100	81.763	ENSSLDG00000004516	-	100	82.979	Seriola_lalandi_dorsalis
ENSSMAG00000007977	cth1	99	81.707	ENSSLDG00000010023	-	100	82.927	Seriola_lalandi_dorsalis
ENSSMAG00000007977	cth1	100	82.371	ENSSLDG00000012760	cth1	100	83.587	Seriola_lalandi_dorsalis
ENSSMAG00000007977	cth1	100	76.947	ENSSPAG00000018659	cth1	100	76.012	Stegastes_partitus
ENSSMAG00000007977	cth1	99	69.255	ENSTRUG00000012770	cth1	99	67.601	Takifugu_rubripes
ENSSMAG00000007977	cth1	99	65.839	ENSTNIG00000000740	cth1	99	63.863	Tetraodon_nigroviridis
ENSSMAG00000007977	cth1	83	57.519	ENSXCOG00000003710	cth1	77	56.067	Xiphophorus_couchianus
ENSSMAG00000007977	cth1	100	65.421	ENSXMAG00000023885	cth1	100	63.240	Xiphophorus_maculatus