EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000008045 (Gene tree)
Gene ID: -
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3817 bases
Position: chr19:7354931-7358747
Accession: ZDB-GENE-060929-444
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000013072	PseudoU_synth_2	PF00849.22	2.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000013243	-	1453	-	ENSSMAP00000013072	334 (aa)	-	A0A2U9CRU3

Gene Model

Click here to download ENSSMAG00000008045's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008045's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008045	rpusd1	91	55.738	ENSG00000007376	RPUSD1	99	66.467	Homo_sapiens
ENSSMAG00000008045	rpusd1	93	84.466	ENSAPOG00000022221	rpusd1	99	84.466	Acanthochromis_polyacanthus
ENSSMAG00000008045	rpusd1	91	57.049	ENSAMEG00000007461	RPUSD1	98	57.049	Ailuropoda_melanoleuca
ENSSMAG00000008045	rpusd1	93	84.516	ENSACIG00000015863	rpusd1	100	83.871	Amphilophus_citrinellus
ENSSMAG00000008045	rpusd1	96	86.520	ENSAOCG00000021975	rpusd1	100	86.520	Amphiprion_ocellaris
ENSSMAG00000008045	rpusd1	96	86.834	ENSAPEG00000001316	rpusd1	100	86.834	Amphiprion_percula
ENSSMAG00000008045	rpusd1	93	86.408	ENSATEG00000002984	rpusd1	99	86.408	Anabas_testudineus
ENSSMAG00000008045	rpusd1	72	57.676	ENSAPLG00000012316	RPUSD1	98	56.098	Anas_platyrhynchos
ENSSMAG00000008045	rpusd1	91	63.816	ENSACAG00000008953	RPUSD1	99	62.951	Anolis_carolinensis
ENSSMAG00000008045	rpusd1	91	56.393	ENSANAG00000024709	RPUSD1	98	56.393	Aotus_nancymaae
ENSSMAG00000008045	rpusd1	93	84.244	ENSACLG00000013692	rpusd1	100	84.244	Astatotilapia_calliptera
ENSSMAG00000008045	rpusd1	92	67.101	ENSAMXG00000019802	rpusd1	99	66.013	Astyanax_mexicanus
ENSSMAG00000008045	rpusd1	91	59.344	ENSBTAG00000000179	RPUSD1	98	59.344	Bos_taurus
ENSSMAG00000008045	rpusd1	91	56.066	ENSCJAG00000012253	RPUSD1	98	57.190	Callithrix_jacchus
ENSSMAG00000008045	rpusd1	91	55.449	ENSCAFG00000019614	RPUSD1	98	56.393	Canis_familiaris
ENSSMAG00000008045	rpusd1	91	55.449	ENSCAFG00020008891	RPUSD1	98	56.393	Canis_lupus_dingo
ENSSMAG00000008045	rpusd1	91	59.672	ENSCHIG00000012872	RPUSD1	98	59.672	Capra_hircus
ENSSMAG00000008045	rpusd1	91	56.066	ENSTSYG00000036934	RPUSD1	98	55.082	Carlito_syrichta
ENSSMAG00000008045	rpusd1	91	56.352	ENSCAPG00000014219	RPUSD1	83	64.032	Cavia_aperea
ENSSMAG00000008045	rpusd1	91	56.352	ENSCPOG00000034604	RPUSD1	83	64.032	Cavia_porcellus
ENSSMAG00000008045	rpusd1	91	56.721	ENSCCAG00000034385	RPUSD1	98	56.721	Cebus_capucinus
ENSSMAG00000008045	rpusd1	91	56.393	ENSCATG00000042983	RPUSD1	98	56.393	Cercocebus_atys
ENSSMAG00000008045	rpusd1	91	55.987	ENSCLAG00000013966	RPUSD1	83	64.427	Chinchilla_lanigera
ENSSMAG00000008045	rpusd1	91	56.066	ENSCSAG00000012121	RPUSD1	98	56.066	Chlorocebus_sabaeus
ENSSMAG00000008045	rpusd1	91	61.513	ENSCPBG00000021101	RPUSD1	99	60.855	Chrysemys_picta_bellii
ENSSMAG00000008045	rpusd1	75	64.032	ENSCANG00000028576	RPUSD1	90	64.032	Colobus_angolensis_palliatus
ENSSMAG00000008045	rpusd1	91	57.190	ENSCGRG00001014253	Rpusd1	98	57.190	Cricetulus_griseus_chok1gshd
ENSSMAG00000008045	rpusd1	91	57.190	ENSCGRG00000017995	Rpusd1	98	57.190	Cricetulus_griseus_crigri
ENSSMAG00000008045	rpusd1	91	83.224	ENSCSEG00000018512	rpusd1	98	82.237	Cynoglossus_semilaevis
ENSSMAG00000008045	rpusd1	93	81.553	ENSCVAG00000022746	rpusd1	100	80.259	Cyprinodon_variegatus
ENSSMAG00000008045	rpusd1	91	70.724	ENSDARG00000060192	rpusd1	99	68.421	Danio_rerio
ENSSMAG00000008045	rpusd1	91	54.487	ENSDNOG00000003721	RPUSD1	98	54.754	Dasypus_novemcinctus
ENSSMAG00000008045	rpusd1	91	56.721	ENSDORG00000026656	Rpusd1	98	56.721	Dipodomys_ordii
ENSSMAG00000008045	rpusd1	89	45.687	ENSEBUG00000008767	rpusd1	92	45.367	Eptatretus_burgeri
ENSSMAG00000008045	rpusd1	91	56.958	ENSEASG00005018421	RPUSD1	74	56.958	Equus_asinus_asinus
ENSSMAG00000008045	rpusd1	93	71.290	ENSELUG00000014307	rpusd1	90	71.290	Esox_lucius
ENSSMAG00000008045	rpusd1	91	57.377	ENSFCAG00000010359	RPUSD1	98	56.721	Felis_catus
ENSSMAG00000008045	rpusd1	91	63.816	ENSFALG00000003211	RPUSD1	99	63.158	Ficedula_albicollis
ENSSMAG00000008045	rpusd1	91	56.311	ENSFDAG00000013398	RPUSD1	98	56.311	Fukomys_damarensis
ENSSMAG00000008045	rpusd1	93	79.612	ENSFHEG00000004736	rpusd1	100	79.935	Fundulus_heteroclitus
ENSSMAG00000008045	rpusd1	92	73.377	ENSGMOG00000010756	rpusd1	99	74.351	Gadus_morhua
ENSSMAG00000008045	rpusd1	91	63.158	ENSGALG00000005315	RPUSD1	99	62.171	Gallus_gallus
ENSSMAG00000008045	rpusd1	93	81.553	ENSGAFG00000009886	rpusd1	100	81.553	Gambusia_affinis
ENSSMAG00000008045	rpusd1	93	85.761	ENSGACG00000014276	rpusd1	100	85.761	Gasterosteus_aculeatus
ENSSMAG00000008045	rpusd1	91	61.184	ENSGAGG00000004181	RPUSD1	99	59.935	Gopherus_agassizii
ENSSMAG00000008045	rpusd1	91	56.536	ENSGGOG00000013997	RPUSD1	98	56.536	Gorilla_gorilla
ENSSMAG00000008045	rpusd1	93	84.566	ENSHBUG00000023728	rpusd1	100	84.566	Haplochromis_burtoni
ENSSMAG00000008045	rpusd1	91	55.663	ENSHGLG00000002595	RPUSD1	98	55.663	Heterocephalus_glaber_female
ENSSMAG00000008045	rpusd1	91	55.663	ENSHGLG00100014303	RPUSD1	98	55.663	Heterocephalus_glaber_male
ENSSMAG00000008045	rpusd1	92	76.144	ENSHCOG00000002390	rpusd1	99	73.377	Hippocampus_comes
ENSSMAG00000008045	rpusd1	91	65.677	ENSIPUG00000001570	rpusd1	99	64.474	Ictalurus_punctatus
ENSSMAG00000008045	rpusd1	91	57.377	ENSSTOG00000004276	RPUSD1	98	57.377	Ictidomys_tridecemlineatus
ENSSMAG00000008045	rpusd1	91	57.377	ENSJJAG00000015696	Rpusd1	98	57.377	Jaculus_jaculus
ENSSMAG00000008045	rpusd1	92	79.545	ENSKMAG00000017287	rpusd1	99	79.545	Kryptolebias_marmoratus
ENSSMAG00000008045	rpusd1	93	84.790	ENSLBEG00000013354	RPUSD1	99	84.790	Labrus_bergylta
ENSSMAG00000008045	rpusd1	93	84.790	ENSLBEG00000022502	rpusd1	99	84.790	Labrus_bergylta
ENSSMAG00000008045	rpusd1	91	61.184	ENSLACG00000008869	RPUSD1	99	60.526	Latimeria_chalumnae
ENSSMAG00000008045	rpusd1	64	82.710	ENSLOCG00000005682	rpusd1	99	82.710	Lepisosteus_oculatus
ENSSMAG00000008045	rpusd1	91	55.082	ENSLAFG00000002115	RPUSD1	98	55.082	Loxodonta_africana
ENSSMAG00000008045	rpusd1	91	56.393	ENSMFAG00000003961	RPUSD1	98	56.393	Macaca_fascicularis
ENSSMAG00000008045	rpusd1	91	56.393	ENSMMUG00000000842	RPUSD1	98	56.393	Macaca_mulatta
ENSSMAG00000008045	rpusd1	91	56.393	ENSMNEG00000042712	RPUSD1	98	56.393	Macaca_nemestrina
ENSSMAG00000008045	rpusd1	91	56.393	ENSMLEG00000030591	RPUSD1	98	56.393	Mandrillus_leucophaeus
ENSSMAG00000008045	rpusd1	93	89.032	ENSMAMG00000004735	rpusd1	99	88.710	Mastacembelus_armatus
ENSSMAG00000008045	rpusd1	93	84.244	ENSMZEG00005003214	rpusd1	100	84.244	Maylandia_zebra
ENSSMAG00000008045	rpusd1	90	63.123	ENSMGAG00000005447	RPUSD1	99	61.794	Meleagris_gallopavo
ENSSMAG00000008045	rpusd1	75	57.312	ENSMAUG00000019998	Rpusd1	96	57.312	Mesocricetus_auratus
ENSSMAG00000008045	rpusd1	91	56.393	ENSMICG00000017561	RPUSD1	98	56.066	Microcebus_murinus
ENSSMAG00000008045	rpusd1	91	57.377	ENSMOCG00000014082	Rpusd1	98	57.377	Microtus_ochrogaster
ENSSMAG00000008045	rpusd1	92	79.153	ENSMMOG00000012569	rpusd1	99	80.456	Mola_mola
ENSSMAG00000008045	rpusd1	92	60.784	ENSMODG00000016882	RPUSD1	99	60.458	Monodelphis_domestica
ENSSMAG00000008045	rpusd1	93	86.452	ENSMALG00000017818	rpusd1	99	86.129	Monopterus_albus
ENSSMAG00000008045	rpusd1	91	58.361	MGP_CAROLIEiJ_G0021244	Rpusd1	98	57.705	Mus_caroli
ENSSMAG00000008045	rpusd1	91	57.705	ENSMUSG00000041199	Rpusd1	98	58.033	Mus_musculus
ENSSMAG00000008045	rpusd1	91	57.377	MGP_PahariEiJ_G0023562	Rpusd1	98	57.377	Mus_pahari
ENSSMAG00000008045	rpusd1	91	57.705	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.033	Mus_spretus
ENSSMAG00000008045	rpusd1	89	56.333	ENSMPUG00000015897	RPUSD1	96	56.333	Mustela_putorius_furo
ENSSMAG00000008045	rpusd1	91	56.721	ENSMLUG00000001089	RPUSD1	98	56.721	Myotis_lucifugus
ENSSMAG00000008045	rpusd1	91	57.705	ENSNGAG00000003595	Rpusd1	98	57.705	Nannospalax_galili
ENSSMAG00000008045	rpusd1	93	82.637	ENSNBRG00000006457	rpusd1	100	82.637	Neolamprologus_brichardi
ENSSMAG00000008045	rpusd1	50	47.337	ENSNLEG00000008424	-	97	47.337	Nomascus_leucogenys
ENSSMAG00000008045	rpusd1	91	60.784	ENSMEUG00000016049	RPUSD1	98	61.184	Notamacropus_eugenii
ENSSMAG00000008045	rpusd1	91	50.162	ENSOPRG00000008340	RPUSD1	98	49.515	Ochotona_princeps
ENSSMAG00000008045	rpusd1	91	56.721	ENSODEG00000016945	RPUSD1	98	55.663	Octodon_degus
ENSSMAG00000008045	rpusd1	92	84.740	ENSONIG00000015672	rpusd1	100	84.740	Oreochromis_niloticus
ENSSMAG00000008045	rpusd1	93	77.670	ENSORLG00000013009	rpusd1	99	77.670	Oryzias_latipes
ENSSMAG00000008045	rpusd1	93	77.670	ENSORLG00020010382	rpusd1	99	77.670	Oryzias_latipes_hni
ENSSMAG00000008045	rpusd1	93	76.699	ENSORLG00015021354	rpusd1	99	76.699	Oryzias_latipes_hsok
ENSSMAG00000008045	rpusd1	93	75.728	ENSOMEG00000021426	rpusd1	99	76.375	Oryzias_melastigma
ENSSMAG00000008045	rpusd1	91	56.066	ENSOGAG00000003795	RPUSD1	98	56.066	Otolemur_garnettii
ENSSMAG00000008045	rpusd1	91	59.672	ENSOARG00000014254	RPUSD1	98	59.672	Ovis_aries
ENSSMAG00000008045	rpusd1	91	56.066	ENSPPAG00000034797	RPUSD1	98	56.066	Pan_paniscus
ENSSMAG00000008045	rpusd1	91	57.377	ENSPPRG00000012389	RPUSD1	83	71.429	Panthera_pardus
ENSSMAG00000008045	rpusd1	93	56.230	ENSPTIG00000008545	RPUSD1	83	71.429	Panthera_tigris_altaica
ENSSMAG00000008045	rpusd1	91	56.066	ENSPTRG00000007565	RPUSD1	98	56.066	Pan_troglodytes
ENSSMAG00000008045	rpusd1	91	56.393	ENSPANG00000024401	RPUSD1	98	56.393	Papio_anubis
ENSSMAG00000008045	rpusd1	93	69.579	ENSPKIG00000018890	rpusd1	91	69.032	Paramormyrops_kingsleyae
ENSSMAG00000008045	rpusd1	91	63.487	ENSPSIG00000013945	RPUSD1	99	63.158	Pelodiscus_sinensis
ENSSMAG00000008045	rpusd1	93	74.110	ENSPMGG00000014950	rpusd1	99	74.434	Periophthalmus_magnuspinnatus
ENSSMAG00000008045	rpusd1	91	57.705	ENSPEMG00000000497	Rpusd1	98	57.705	Peromyscus_maniculatus_bairdii
ENSSMAG00000008045	rpusd1	92	54.072	ENSPMAG00000001563	rpusd1	99	53.420	Petromyzon_marinus
ENSSMAG00000008045	rpusd1	96	61.562	ENSPCIG00000021216	-	97	61.562	Phascolarctos_cinereus
ENSSMAG00000008045	rpusd1	93	81.877	ENSPFOG00000007946	rpusd1	100	78.135	Poecilia_formosa
ENSSMAG00000008045	rpusd1	93	82.201	ENSPLAG00000011925	rpusd1	100	82.201	Poecilia_latipinna
ENSSMAG00000008045	rpusd1	93	81.877	ENSPMEG00000002910	rpusd1	100	78.135	Poecilia_mexicana
ENSSMAG00000008045	rpusd1	93	82.848	ENSPREG00000019851	rpusd1	100	82.848	Poecilia_reticulata
ENSSMAG00000008045	rpusd1	91	43.607	ENSPCAG00000002258	RPUSD1	98	42.951	Procavia_capensis
ENSSMAG00000008045	rpusd1	91	55.738	ENSPCOG00000022582	RPUSD1	98	55.738	Propithecus_coquereli
ENSSMAG00000008045	rpusd1	91	52.787	ENSPVAG00000013104	RPUSD1	98	52.787	Pteropus_vampyrus
ENSSMAG00000008045	rpusd1	93	84.566	ENSPNYG00000024076	rpusd1	100	84.566	Pundamilia_nyererei
ENSSMAG00000008045	rpusd1	92	65.472	ENSPNAG00000013806	rpusd1	99	64.052	Pygocentrus_nattereri
ENSSMAG00000008045	rpusd1	91	58.033	ENSRNOG00000023639	Rpusd1	98	58.033	Rattus_norvegicus
ENSSMAG00000008045	rpusd1	91	56.721	ENSRBIG00000030238	RPUSD1	98	56.721	Rhinopithecus_bieti
ENSSMAG00000008045	rpusd1	91	56.721	ENSRROG00000036663	RPUSD1	98	56.721	Rhinopithecus_roxellana
ENSSMAG00000008045	rpusd1	91	57.049	ENSSBOG00000033063	RPUSD1	98	57.049	Saimiri_boliviensis_boliviensis
ENSSMAG00000008045	rpusd1	91	60.855	ENSSHAG00000013500	RPUSD1	98	60.855	Sarcophilus_harrisii
ENSSMAG00000008045	rpusd1	91	73.355	ENSSFOG00015014394	rpusd1	99	71.711	Scleropages_formosus
ENSSMAG00000008045	rpusd1	96	90.596	ENSSDUG00000001829	rpusd1	100	90.596	Seriola_dumerili
ENSSMAG00000008045	rpusd1	96	90.596	ENSSLDG00000020853	rpusd1	100	90.596	Seriola_lalandi_dorsalis
ENSSMAG00000008045	rpusd1	58	58.031	ENSSPUG00000005119	-	98	58.031	Sphenodon_punctatus
ENSSMAG00000008045	rpusd1	93	89.320	ENSSPAG00000012708	rpusd1	99	89.320	Stegastes_partitus
ENSSMAG00000008045	rpusd1	91	57.705	ENSSSCG00000008000	RPUSD1	98	65.748	Sus_scrofa
ENSSMAG00000008045	rpusd1	75	69.323	ENSTGUG00000015375	RPUSD1	94	71.849	Taeniopygia_guttata
ENSSMAG00000008045	rpusd1	93	81.230	ENSTRUG00000003041	rpusd1	99	81.230	Takifugu_rubripes
ENSSMAG00000008045	rpusd1	92	70.915	ENSTNIG00000002660	rpusd1	99	70.915	Tetraodon_nigroviridis
ENSSMAG00000008045	rpusd1	91	57.377	ENSTTRG00000010167	RPUSD1	98	57.377	Tursiops_truncatus
ENSSMAG00000008045	rpusd1	91	56.721	ENSUAMG00000012736	RPUSD1	98	56.393	Ursus_americanus
ENSSMAG00000008045	rpusd1	91	56.721	ENSUMAG00000021174	RPUSD1	98	56.393	Ursus_maritimus
ENSSMAG00000008045	rpusd1	91	57.049	ENSVVUG00000012357	RPUSD1	98	56.393	Vulpes_vulpes
ENSSMAG00000008045	rpusd1	91	63.487	ENSXETG00000007184	rpusd1	98	62.500	Xenopus_tropicalis
ENSSMAG00000008045	rpusd1	93	81.877	ENSXCOG00000017930	rpusd1	100	81.877	Xiphophorus_couchianus
ENSSMAG00000008045	rpusd1	93	82.201	ENSXMAG00000024084	rpusd1	100	82.201	Xiphophorus_maculatus