EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000008089 (Gene tree)
Gene ID: -
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 6354 bases
Position: chr18:18507750-18514103
Accession: ZDB-GENE-040426-2164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000013175	AD	PF09793.9	3.5e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000013345	-	1510	-	ENSSMAP00000013175	196 (aa)	-	A0A2U9CQC9

Gene Model

Click here to download ENSSMAG00000008089's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008089's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008089	lsm12b	100	85.204	ENSG00000161654	LSM12	100	85.204	Homo_sapiens
ENSSMAG00000008089	lsm12b	100	98.980	ENSAPOG00000007907	lsm12b	100	98.980	Acanthochromis_polyacanthus
ENSSMAG00000008089	lsm12b	100	83.417	ENSAMEG00000018321	LSM12	100	83.417	Ailuropoda_melanoleuca
ENSSMAG00000008089	lsm12b	100	97.449	ENSACIG00000008538	lsm12b	100	97.449	Amphilophus_citrinellus
ENSSMAG00000008089	lsm12b	100	99.490	ENSAOCG00000021847	lsm12b	88	99.490	Amphiprion_ocellaris
ENSSMAG00000008089	lsm12b	100	99.490	ENSAPEG00000002252	lsm12b	100	99.490	Amphiprion_percula
ENSSMAG00000008089	lsm12b	100	97.959	ENSATEG00000005705	lsm12b	100	97.959	Anabas_testudineus
ENSSMAG00000008089	lsm12b	100	84.184	ENSACAG00000004618	LSM12	100	84.184	Anolis_carolinensis
ENSSMAG00000008089	lsm12b	100	85.204	ENSANAG00000029011	LSM12	100	85.204	Aotus_nancymaae
ENSSMAG00000008089	lsm12b	100	97.959	ENSACLG00000026332	lsm12b	100	97.959	Astatotilapia_calliptera
ENSSMAG00000008089	lsm12b	100	93.878	ENSAMXG00000032952	lsm12b	100	93.878	Astyanax_mexicanus
ENSSMAG00000008089	lsm12b	100	85.714	ENSAMXG00000036117	lsm12a	91	85.714	Astyanax_mexicanus
ENSSMAG00000008089	lsm12b	100	85.204	ENSBTAG00000016252	LSM12	100	85.204	Bos_taurus
ENSSMAG00000008089	lsm12b	100	85.204	ENSCJAG00000048480	LSM12	100	85.204	Callithrix_jacchus
ENSSMAG00000008089	lsm12b	100	85.204	ENSCAFG00000014379	LSM12	92	85.204	Canis_familiaris
ENSSMAG00000008089	lsm12b	100	85.204	ENSCAFG00020012173	LSM12	100	85.204	Canis_lupus_dingo
ENSSMAG00000008089	lsm12b	100	85.204	ENSCHIG00000018175	LSM12	100	85.204	Capra_hircus
ENSSMAG00000008089	lsm12b	100	85.204	ENSTSYG00000036361	LSM12	100	85.204	Carlito_syrichta
ENSSMAG00000008089	lsm12b	83	81.481	ENSCAPG00000009647	LSM12	89	81.481	Cavia_aperea
ENSSMAG00000008089	lsm12b	100	84.184	ENSCPOG00000012860	LSM12	100	84.184	Cavia_porcellus
ENSSMAG00000008089	lsm12b	100	85.204	ENSCCAG00000032905	LSM12	100	85.204	Cebus_capucinus
ENSSMAG00000008089	lsm12b	100	85.204	ENSCATG00000030577	-	100	85.204	Cercocebus_atys
ENSSMAG00000008089	lsm12b	100	84.694	ENSCLAG00000015759	LSM12	100	84.694	Chinchilla_lanigera
ENSSMAG00000008089	lsm12b	100	85.714	ENSCSAG00000003486	LSM12	100	85.714	Chlorocebus_sabaeus
ENSSMAG00000008089	lsm12b	56	86.239	ENSCHOG00000001198	LSM12	100	86.239	Choloepus_hoffmanni
ENSSMAG00000008089	lsm12b	100	85.714	ENSCPBG00000027105	LSM12	100	85.714	Chrysemys_picta_bellii
ENSSMAG00000008089	lsm12b	100	85.204	ENSCANG00000043328	LSM12	100	85.204	Colobus_angolensis_palliatus
ENSSMAG00000008089	lsm12b	100	85.204	ENSCGRG00001002094	Lsm12	100	85.204	Cricetulus_griseus_chok1gshd
ENSSMAG00000008089	lsm12b	89	77.586	ENSCGRG00000004316	Lsm12	98	77.586	Cricetulus_griseus_crigri
ENSSMAG00000008089	lsm12b	100	97.959	ENSCSEG00000008434	lsm12b	100	97.959	Cynoglossus_semilaevis
ENSSMAG00000008089	lsm12b	100	97.449	ENSCVAG00000008755	lsm12b	100	97.449	Cyprinodon_variegatus
ENSSMAG00000008089	lsm12b	100	86.735	ENSDARG00000028848	lsm12a	100	86.735	Danio_rerio
ENSSMAG00000008089	lsm12b	100	94.898	ENSDARG00000109510	lsm12b	100	94.898	Danio_rerio
ENSSMAG00000008089	lsm12b	100	85.204	ENSDNOG00000002418	LSM12	91	85.204	Dasypus_novemcinctus
ENSSMAG00000008089	lsm12b	100	85.204	ENSDORG00000016381	Lsm12	100	85.204	Dipodomys_ordii
ENSSMAG00000008089	lsm12b	83	33.133	FBgn0030364	Lsm12	76	33.133	Drosophila_melanogaster
ENSSMAG00000008089	lsm12b	73	32.911	FBgn0036057	CG14164	83	32.911	Drosophila_melanogaster
ENSSMAG00000008089	lsm12b	100	84.694	ENSETEG00000008374	LSM12	100	84.694	Echinops_telfairi
ENSSMAG00000008089	lsm12b	88	76.301	ENSETEG00000011012	-	99	76.301	Echinops_telfairi
ENSSMAG00000008089	lsm12b	85	66.467	ENSEBUG00000016299	lsm12a	92	66.467	Eptatretus_burgeri
ENSSMAG00000008089	lsm12b	100	85.204	ENSEASG00005010155	LSM12	100	85.204	Equus_asinus_asinus
ENSSMAG00000008089	lsm12b	100	85.204	ENSECAG00000009071	LSM12	100	85.204	Equus_caballus
ENSSMAG00000008089	lsm12b	78	85.621	ENSEEUG00000002419	-	100	85.621	Erinaceus_europaeus
ENSSMAG00000008089	lsm12b	100	92.347	ENSELUG00000000256	-	100	92.347	Esox_lucius
ENSSMAG00000008089	lsm12b	100	94.898	ENSELUG00000015538	lsm12b	100	90.306	Esox_lucius
ENSSMAG00000008089	lsm12b	100	85.204	ENSFCAG00000037021	LSM12	100	85.204	Felis_catus
ENSSMAG00000008089	lsm12b	80	82.051	ENSFDAG00000008954	LSM12	91	82.051	Fukomys_damarensis
ENSSMAG00000008089	lsm12b	100	97.449	ENSFHEG00000019913	lsm12b	100	97.449	Fundulus_heteroclitus
ENSSMAG00000008089	lsm12b	81	98.734	ENSGMOG00000015449	lsm12b	100	98.734	Gadus_morhua
ENSSMAG00000008089	lsm12b	78	86.275	ENSGALG00000039803	LSM12	100	86.275	Gallus_gallus
ENSSMAG00000008089	lsm12b	100	97.449	ENSGAFG00000011829	lsm12b	100	97.449	Gambusia_affinis
ENSSMAG00000008089	lsm12b	81	99.367	ENSGACG00000003428	lsm12b	100	99.367	Gasterosteus_aculeatus
ENSSMAG00000008089	lsm12b	100	84.694	ENSGAGG00000021965	LSM12	100	84.694	Gopherus_agassizii
ENSSMAG00000008089	lsm12b	100	85.204	ENSGGOG00000010589	-	100	85.204	Gorilla_gorilla
ENSSMAG00000008089	lsm12b	85	97.605	ENSHBUG00000007667	lsm12b	74	97.605	Haplochromis_burtoni
ENSSMAG00000008089	lsm12b	100	85.204	ENSHGLG00000011411	LSM12	100	85.204	Heterocephalus_glaber_female
ENSSMAG00000008089	lsm12b	79	85.065	ENSHGLG00100000241	LSM12	82	85.065	Heterocephalus_glaber_male
ENSSMAG00000008089	lsm12b	100	95.408	ENSHCOG00000002094	lsm12b	100	95.408	Hippocampus_comes
ENSSMAG00000008089	lsm12b	99	83.505	ENSIPUG00000008936	lsm12a	99	83.505	Ictalurus_punctatus
ENSSMAG00000008089	lsm12b	100	94.388	ENSIPUG00000014800	lsm12	100	94.388	Ictalurus_punctatus
ENSSMAG00000008089	lsm12b	100	85.204	ENSSTOG00000007403	LSM12	100	85.204	Ictidomys_tridecemlineatus
ENSSMAG00000008089	lsm12b	76	75.839	ENSJJAG00000014652	-	89	75.839	Jaculus_jaculus
ENSSMAG00000008089	lsm12b	100	84.184	ENSJJAG00000004364	-	100	85.455	Jaculus_jaculus
ENSSMAG00000008089	lsm12b	96	76.316	ENSJJAG00000011793	-	100	76.316	Jaculus_jaculus
ENSSMAG00000008089	lsm12b	85	97.006	ENSKMAG00000007704	lsm12b	56	97.006	Kryptolebias_marmoratus
ENSSMAG00000008089	lsm12b	100	98.980	ENSLBEG00000027999	lsm12b	100	98.980	Labrus_bergylta
ENSSMAG00000008089	lsm12b	100	87.755	ENSLACG00000015981	LSM12	100	87.755	Latimeria_chalumnae
ENSSMAG00000008089	lsm12b	100	92.347	ENSLOCG00000013079	lsm12b	99	92.347	Lepisosteus_oculatus
ENSSMAG00000008089	lsm12b	100	85.204	ENSLAFG00000005202	LSM12	100	85.204	Loxodonta_africana
ENSSMAG00000008089	lsm12b	100	85.204	ENSMFAG00000031376	LSM12	100	85.204	Macaca_fascicularis
ENSSMAG00000008089	lsm12b	65	74.713	ENSMMUG00000042106	-	100	74.713	Macaca_mulatta
ENSSMAG00000008089	lsm12b	100	85.204	ENSMMUG00000006804	LSM12	100	85.204	Macaca_mulatta
ENSSMAG00000008089	lsm12b	100	85.204	ENSMNEG00000030594	-	100	85.204	Macaca_nemestrina
ENSSMAG00000008089	lsm12b	100	85.204	ENSMLEG00000039934	LSM12	100	85.204	Mandrillus_leucophaeus
ENSSMAG00000008089	lsm12b	100	98.980	ENSMAMG00000004279	lsm12b	100	98.980	Mastacembelus_armatus
ENSSMAG00000008089	lsm12b	100	97.959	ENSMZEG00005005754	lsm12b	100	97.959	Maylandia_zebra
ENSSMAG00000008089	lsm12b	100	85.714	ENSMICG00000037219	LSM12	100	85.714	Microcebus_murinus
ENSSMAG00000008089	lsm12b	100	85.204	ENSMOCG00000019878	-	100	85.204	Microtus_ochrogaster
ENSSMAG00000008089	lsm12b	100	72.449	ENSMOCG00000017015	-	86	72.449	Microtus_ochrogaster
ENSSMAG00000008089	lsm12b	100	98.980	ENSMMOG00000020848	lsm12b	100	98.980	Mola_mola
ENSSMAG00000008089	lsm12b	100	98.980	ENSMALG00000007578	lsm12b	100	98.980	Monopterus_albus
ENSSMAG00000008089	lsm12b	100	84.694	MGP_CAROLIEiJ_G0017241	Lsm12	100	84.694	Mus_caroli
ENSSMAG00000008089	lsm12b	100	85.204	ENSMUSG00000020922	Lsm12	100	85.204	Mus_musculus
ENSSMAG00000008089	lsm12b	100	78.404	MGP_PahariEiJ_G0018371	Lsm12	100	78.404	Mus_pahari
ENSSMAG00000008089	lsm12b	100	84.694	MGP_SPRETEiJ_G0018084	Lsm12	100	84.694	Mus_spretus
ENSSMAG00000008089	lsm12b	100	85.714	ENSMLUG00000006391	LSM12	100	85.714	Myotis_lucifugus
ENSSMAG00000008089	lsm12b	100	85.204	ENSNGAG00000001870	Lsm12	100	85.204	Nannospalax_galili
ENSSMAG00000008089	lsm12b	100	58.621	ENSNGAG00000015429	-	100	58.621	Nannospalax_galili
ENSSMAG00000008089	lsm12b	100	97.959	ENSNBRG00000006266	lsm12b	100	97.959	Neolamprologus_brichardi
ENSSMAG00000008089	lsm12b	100	85.204	ENSNLEG00000005580	-	100	85.204	Nomascus_leucogenys
ENSSMAG00000008089	lsm12b	85	84.940	ENSMEUG00000007501	-	100	84.940	Notamacropus_eugenii
ENSSMAG00000008089	lsm12b	100	85.204	ENSOPRG00000008552	LSM12	100	85.204	Ochotona_princeps
ENSSMAG00000008089	lsm12b	100	77.551	ENSODEG00000007886	-	74	77.551	Octodon_degus
ENSSMAG00000008089	lsm12b	99	85.052	ENSODEG00000017998	-	99	85.052	Octodon_degus
ENSSMAG00000008089	lsm12b	100	97.959	ENSONIG00000007933	lsm12b	100	97.959	Oreochromis_niloticus
ENSSMAG00000008089	lsm12b	99	79.487	ENSOCUG00000027889	-	100	79.487	Oryctolagus_cuniculus
ENSSMAG00000008089	lsm12b	99	80.000	ENSOCUG00000021254	-	100	80.000	Oryctolagus_cuniculus
ENSSMAG00000008089	lsm12b	100	83.417	ENSOCUG00000008566	-	100	83.417	Oryctolagus_cuniculus
ENSSMAG00000008089	lsm12b	99	78.974	ENSOCUG00000024823	-	100	78.974	Oryctolagus_cuniculus
ENSSMAG00000008089	lsm12b	100	97.449	ENSORLG00000011310	lsm12b	100	97.449	Oryzias_latipes
ENSSMAG00000008089	lsm12b	100	97.449	ENSORLG00020002060	lsm12b	92	97.449	Oryzias_latipes_hni
ENSSMAG00000008089	lsm12b	100	97.449	ENSORLG00015001647	lsm12b	92	97.449	Oryzias_latipes_hsok
ENSSMAG00000008089	lsm12b	100	98.469	ENSOMEG00000006184	lsm12b	92	98.469	Oryzias_melastigma
ENSSMAG00000008089	lsm12b	100	85.714	ENSOGAG00000010489	LSM12	100	85.714	Otolemur_garnettii
ENSSMAG00000008089	lsm12b	100	82.178	ENSOARG00000006589	LSM12	100	82.178	Ovis_aries
ENSSMAG00000008089	lsm12b	100	75.510	ENSPPAG00000034974	-	100	75.510	Pan_paniscus
ENSSMAG00000008089	lsm12b	100	85.204	ENSPPRG00000023420	LSM12	100	85.204	Panthera_pardus
ENSSMAG00000008089	lsm12b	72	84.545	ENSPTIG00000014850	-	100	84.545	Panthera_tigris_altaica
ENSSMAG00000008089	lsm12b	78	85.621	ENSPTIG00000012704	-	82	85.621	Panthera_tigris_altaica
ENSSMAG00000008089	lsm12b	100	85.204	ENSPTRG00000009261	LSM12	100	85.204	Pan_troglodytes
ENSSMAG00000008089	lsm12b	100	85.204	ENSPANG00000021315	-	100	85.204	Papio_anubis
ENSSMAG00000008089	lsm12b	100	83.673	ENSPKIG00000017932	-	100	83.673	Paramormyrops_kingsleyae
ENSSMAG00000008089	lsm12b	100	93.367	ENSPKIG00000021058	lsm12b	100	93.367	Paramormyrops_kingsleyae
ENSSMAG00000008089	lsm12b	100	97.959	ENSPMGG00000021344	lsm12b	100	97.959	Periophthalmus_magnuspinnatus
ENSSMAG00000008089	lsm12b	100	85.204	ENSPEMG00000012199	Lsm12	100	85.204	Peromyscus_maniculatus_bairdii
ENSSMAG00000008089	lsm12b	89	67.429	ENSPMAG00000005461	lsm12a	99	67.429	Petromyzon_marinus
ENSSMAG00000008089	lsm12b	100	85.204	ENSPCIG00000020244	LSM12	100	85.204	Phascolarctos_cinereus
ENSSMAG00000008089	lsm12b	100	96.429	ENSPFOG00000015930	lsm12b	100	96.429	Poecilia_formosa
ENSSMAG00000008089	lsm12b	100	96.429	ENSPLAG00000021089	lsm12b	100	96.429	Poecilia_latipinna
ENSSMAG00000008089	lsm12b	100	96.429	ENSPMEG00000012961	lsm12b	100	96.429	Poecilia_mexicana
ENSSMAG00000008089	lsm12b	87	98.246	ENSPREG00000010236	lsm12b	95	98.246	Poecilia_reticulata
ENSSMAG00000008089	lsm12b	100	85.204	ENSPPYG00000008344	LSM12	100	85.204	Pongo_abelii
ENSSMAG00000008089	lsm12b	81	85.535	ENSPCAG00000008790	LSM12	100	85.535	Procavia_capensis
ENSSMAG00000008089	lsm12b	100	85.204	ENSPCOG00000027951	LSM12	100	85.204	Propithecus_coquereli
ENSSMAG00000008089	lsm12b	100	85.714	ENSPVAG00000013706	LSM12	100	85.714	Pteropus_vampyrus
ENSSMAG00000008089	lsm12b	100	97.959	ENSPNYG00000003386	lsm12b	100	97.959	Pundamilia_nyererei
ENSSMAG00000008089	lsm12b	100	94.388	ENSPNAG00000004186	lsm12b	100	94.388	Pygocentrus_nattereri
ENSSMAG00000008089	lsm12b	100	84.694	ENSPNAG00000018435	lsm12a	100	84.694	Pygocentrus_nattereri
ENSSMAG00000008089	lsm12b	100	85.204	ENSRNOG00000020894	Lsm12	100	85.204	Rattus_norvegicus
ENSSMAG00000008089	lsm12b	100	85.204	ENSRBIG00000027910	LSM12	100	85.204	Rhinopithecus_bieti
ENSSMAG00000008089	lsm12b	99	53.093	ENSRROG00000000537	-	99	53.093	Rhinopithecus_roxellana
ENSSMAG00000008089	lsm12b	100	85.204	ENSRROG00000045530	-	100	85.204	Rhinopithecus_roxellana
ENSSMAG00000008089	lsm12b	100	85.204	ENSSBOG00000025310	LSM12	100	85.204	Saimiri_boliviensis_boliviensis
ENSSMAG00000008089	lsm12b	81	84.177	ENSSHAG00000014914	LSM12	100	84.177	Sarcophilus_harrisii
ENSSMAG00000008089	lsm12b	100	94.898	ENSSFOG00015009612	lsm12	100	94.898	Scleropages_formosus
ENSSMAG00000008089	lsm12b	100	93.878	ENSSFOG00015020392	lsm12a	100	93.878	Scleropages_formosus
ENSSMAG00000008089	lsm12b	100	98.980	ENSSDUG00000012711	lsm12b	100	98.980	Seriola_dumerili
ENSSMAG00000008089	lsm12b	100	98.980	ENSSLDG00000007404	lsm12b	100	98.980	Seriola_lalandi_dorsalis
ENSSMAG00000008089	lsm12b	78	84.967	ENSSARG00000005537	LSM12	100	84.967	Sorex_araneus
ENSSMAG00000008089	lsm12b	100	85.714	ENSSPUG00000011984	LSM12	100	85.714	Sphenodon_punctatus
ENSSMAG00000008089	lsm12b	100	99.490	ENSSPAG00000017058	lsm12b	100	99.490	Stegastes_partitus
ENSSMAG00000008089	lsm12b	100	85.204	ENSSSCG00000032394	LSM12	100	85.204	Sus_scrofa
ENSSMAG00000008089	lsm12b	100	97.959	ENSTRUG00000007121	lsm12b	100	97.959	Takifugu_rubripes
ENSSMAG00000008089	lsm12b	100	96.939	ENSTNIG00000014436	lsm12b	100	96.939	Tetraodon_nigroviridis
ENSSMAG00000008089	lsm12b	100	84.694	ENSTBEG00000012523	-	100	84.694	Tupaia_belangeri
ENSSMAG00000008089	lsm12b	100	82.653	ENSTBEG00000012392	-	100	82.653	Tupaia_belangeri
ENSSMAG00000008089	lsm12b	100	85.204	ENSTTRG00000010433	LSM12	100	85.204	Tursiops_truncatus
ENSSMAG00000008089	lsm12b	100	85.204	ENSUAMG00000006313	LSM12	100	85.204	Ursus_americanus
ENSSMAG00000008089	lsm12b	81	82.911	ENSUMAG00000012987	LSM12	90	82.911	Ursus_maritimus
ENSSMAG00000008089	lsm12b	100	80.612	ENSVPAG00000011145	LSM12	100	80.612	Vicugna_pacos
ENSSMAG00000008089	lsm12b	100	85.204	ENSVVUG00000017581	LSM12	100	85.204	Vulpes_vulpes
ENSSMAG00000008089	lsm12b	82	61.250	ENSXETG00000003371	lsm12	77	61.250	Xenopus_tropicalis
ENSSMAG00000008089	lsm12b	100	97.449	ENSXCOG00000003994	lsm12b	100	97.449	Xiphophorus_couchianus
ENSSMAG00000008089	lsm12b	100	97.449	ENSXMAG00000020950	lsm12b	100	97.449	Xiphophorus_maculatus