EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000008112 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10576 bases
Position: chr11:15333705-15344280
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000013263	PRP1_N	PF06424.12	1.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000013435	-	4307	-	ENSSMAP00000013263	969 (aa)	-	A0A2U9C2B5

Gene Model

Click here to download ENSSMAG00000008112's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008112's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008112	prpf6	96	91.286	ENSG00000101161	PRPF6	100	91.286	Homo_sapiens
ENSSMAG00000008112	prpf6	100	96.594	ENSAPOG00000010395	prpf6	100	96.594	Acanthochromis_polyacanthus
ENSSMAG00000008112	prpf6	96	90.658	ENSAMEG00000001916	PRPF6	99	90.658	Ailuropoda_melanoleuca
ENSSMAG00000008112	prpf6	100	96.182	ENSACIG00000019862	prpf6	100	96.182	Amphilophus_citrinellus
ENSSMAG00000008112	prpf6	100	96.698	ENSAOCG00000012988	prpf6	100	96.698	Amphiprion_ocellaris
ENSSMAG00000008112	prpf6	96	90.968	ENSAPEG00000008301	prpf6	100	91.183	Amphiprion_percula
ENSSMAG00000008112	prpf6	100	96.594	ENSATEG00000005581	prpf6	100	96.594	Anabas_testudineus
ENSSMAG00000008112	prpf6	96	91.498	ENSACAG00000006464	PRPF6	95	91.498	Anolis_carolinensis
ENSSMAG00000008112	prpf6	96	91.498	ENSANAG00000012661	PRPF6	100	92.344	Aotus_nancymaae
ENSSMAG00000008112	prpf6	100	96.078	ENSACLG00000025875	prpf6	100	96.078	Astatotilapia_calliptera
ENSSMAG00000008112	prpf6	97	94.068	ENSAMXG00000001929	prpf6	97	94.068	Astyanax_mexicanus
ENSSMAG00000008112	prpf6	96	91.605	ENSBTAG00000011656	PRPF6	100	91.605	Bos_taurus
ENSSMAG00000008112	prpf6	96	91.498	ENSCJAG00000010616	PRPF6	100	91.498	Callithrix_jacchus
ENSSMAG00000008112	prpf6	96	91.711	ENSCAFG00000013165	PRPF6	100	91.711	Canis_familiaris
ENSSMAG00000008112	prpf6	96	91.711	ENSCAFG00020002050	PRPF6	100	91.711	Canis_lupus_dingo
ENSSMAG00000008112	prpf6	96	91.605	ENSCHIG00000018187	PRPF6	100	91.605	Capra_hircus
ENSSMAG00000008112	prpf6	96	91.817	ENSTSYG00000007814	PRPF6	100	91.817	Carlito_syrichta
ENSSMAG00000008112	prpf6	93	90.840	ENSCAPG00000015077	PRPF6	100	90.403	Cavia_aperea
ENSSMAG00000008112	prpf6	96	92.136	ENSCPOG00000007518	PRPF6	100	92.136	Cavia_porcellus
ENSSMAG00000008112	prpf6	96	88.417	ENSCCAG00000024564	PRPF6	100	88.417	Cebus_capucinus
ENSSMAG00000008112	prpf6	96	91.392	ENSCATG00000037473	PRPF6	100	91.392	Cercocebus_atys
ENSSMAG00000008112	prpf6	96	88.735	ENSCLAG00000003854	PRPF6	100	88.735	Chinchilla_lanigera
ENSSMAG00000008112	prpf6	96	86.589	ENSCSAG00000016742	PRPF6	100	86.589	Chlorocebus_sabaeus
ENSSMAG00000008112	prpf6	81	77.073	ENSCHOG00000003315	-	98	76.860	Choloepus_hoffmanni
ENSSMAG00000008112	prpf6	98	90.531	ENSCPBG00000013964	PRPF6	96	92.021	Chrysemys_picta_bellii
ENSSMAG00000008112	prpf6	96	72.410	ENSCING00000008817	-	99	72.410	Ciona_intestinalis
ENSSMAG00000008112	prpf6	96	91.180	ENSCANG00000038230	PRPF6	100	91.180	Colobus_angolensis_palliatus
ENSSMAG00000008112	prpf6	96	92.136	ENSCGRG00001022666	Prpf6	100	92.136	Cricetulus_griseus_chok1gshd
ENSSMAG00000008112	prpf6	96	91.720	ENSCSEG00000018561	prpf6	100	91.720	Cynoglossus_semilaevis
ENSSMAG00000008112	prpf6	100	96.078	ENSCVAG00000010550	prpf6	100	96.078	Cyprinodon_variegatus
ENSSMAG00000008112	prpf6	97	93.326	ENSDARG00000091367	prpf6	100	93.326	Danio_rerio
ENSSMAG00000008112	prpf6	96	91.286	ENSDNOG00000040544	PRPF6	100	91.286	Dasypus_novemcinctus
ENSSMAG00000008112	prpf6	87	91.706	ENSDORG00000005406	Prpf6	100	91.706	Dipodomys_ordii
ENSSMAG00000008112	prpf6	96	71.490	FBgn0036828	CG6841	99	71.490	Drosophila_melanogaster
ENSSMAG00000008112	prpf6	83	90.351	ENSETEG00000004447	PRPF6	85	90.351	Echinops_telfairi
ENSSMAG00000008112	prpf6	96	85.503	ENSEBUG00000008835	prpf6	100	85.503	Eptatretus_burgeri
ENSSMAG00000008112	prpf6	98	90.690	ENSEASG00005023115	PRPF6	100	91.817	Equus_asinus_asinus
ENSSMAG00000008112	prpf6	96	87.566	ENSECAG00000013983	PRPF6	100	87.566	Equus_caballus
ENSSMAG00000008112	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSSMAG00000008112	prpf6	97	95.122	ENSELUG00000001945	prpf6	94	95.122	Esox_lucius
ENSSMAG00000008112	prpf6	96	91.711	ENSFCAG00000001183	PRPF6	100	91.711	Felis_catus
ENSSMAG00000008112	prpf6	96	91.534	ENSFALG00000010326	-	98	91.534	Ficedula_albicollis
ENSSMAG00000008112	prpf6	99	83.695	ENSFALG00000006046	-	97	85.912	Ficedula_albicollis
ENSSMAG00000008112	prpf6	96	90.648	ENSFDAG00000006451	PRPF6	100	91.723	Fukomys_damarensis
ENSSMAG00000008112	prpf6	99	95.967	ENSFHEG00000000560	prpf6	99	95.967	Fundulus_heteroclitus
ENSSMAG00000008112	prpf6	97	94.910	ENSGMOG00000015622	prpf6	99	94.910	Gadus_morhua
ENSSMAG00000008112	prpf6	96	91.605	ENSGALG00000006001	PRPF6	100	91.605	Gallus_gallus
ENSSMAG00000008112	prpf6	100	91.331	ENSGAFG00000021109	prpf6	100	91.331	Gambusia_affinis
ENSSMAG00000008112	prpf6	97	96.186	ENSGACG00000002576	prpf6	100	96.186	Gasterosteus_aculeatus
ENSSMAG00000008112	prpf6	98	90.625	ENSGAGG00000008653	PRPF6	96	92.128	Gopherus_agassizii
ENSSMAG00000008112	prpf6	96	91.286	ENSGGOG00000016876	PRPF6	100	91.286	Gorilla_gorilla
ENSSMAG00000008112	prpf6	100	96.078	ENSHBUG00000004496	prpf6	100	96.078	Haplochromis_burtoni
ENSSMAG00000008112	prpf6	96	92.030	ENSHGLG00000009222	PRPF6	100	92.030	Heterocephalus_glaber_female
ENSSMAG00000008112	prpf6	93	91.930	ENSHGLG00100016600	PRPF6	100	91.930	Heterocephalus_glaber_male
ENSSMAG00000008112	prpf6	100	95.356	ENSHCOG00000011513	prpf6	100	95.356	Hippocampus_comes
ENSSMAG00000008112	prpf6	100	92.300	ENSIPUG00000004912	prpf6	100	92.213	Ictalurus_punctatus
ENSSMAG00000008112	prpf6	96	89.597	ENSSTOG00000002922	PRPF6	100	89.172	Ictidomys_tridecemlineatus
ENSSMAG00000008112	prpf6	96	92.136	ENSJJAG00000000836	Prpf6	100	92.136	Jaculus_jaculus
ENSSMAG00000008112	prpf6	97	97.021	ENSKMAG00000017800	prpf6	100	95.872	Kryptolebias_marmoratus
ENSSMAG00000008112	prpf6	100	96.388	ENSLBEG00000012582	prpf6	100	96.388	Labrus_bergylta
ENSSMAG00000008112	prpf6	96	93.830	ENSLOCG00000004827	prpf6	96	92.447	Lepisosteus_oculatus
ENSSMAG00000008112	prpf6	96	91.286	ENSLAFG00000005272	PRPF6	100	91.286	Loxodonta_africana
ENSSMAG00000008112	prpf6	96	91.180	ENSMFAG00000037542	PRPF6	100	91.180	Macaca_fascicularis
ENSSMAG00000008112	prpf6	96	85.138	ENSMMUG00000015558	PRPF6	98	92.721	Macaca_mulatta
ENSSMAG00000008112	prpf6	96	78.919	ENSMNEG00000045555	PRPF6	100	78.919	Macaca_nemestrina
ENSSMAG00000008112	prpf6	100	95.872	ENSMAMG00000010718	prpf6	100	95.872	Mastacembelus_armatus
ENSSMAG00000008112	prpf6	90	96.571	ENSMZEG00005026539	prpf6	100	96.571	Maylandia_zebra
ENSSMAG00000008112	prpf6	97	96.695	ENSMZEG00005015261	-	100	96.695	Maylandia_zebra
ENSSMAG00000008112	prpf6	93	91.712	ENSMGAG00000006634	PRPF6	100	91.712	Meleagris_gallopavo
ENSSMAG00000008112	prpf6	96	92.136	ENSMAUG00000013969	Prpf6	100	92.136	Mesocricetus_auratus
ENSSMAG00000008112	prpf6	84	91.119	ENSMICG00000017793	PRPF6	98	91.122	Microcebus_murinus
ENSSMAG00000008112	prpf6	96	92.030	ENSMOCG00000001701	Prpf6	100	92.030	Microtus_ochrogaster
ENSSMAG00000008112	prpf6	96	96.667	ENSMMOG00000020419	prpf6	100	96.667	Mola_mola
ENSSMAG00000008112	prpf6	93	92.602	ENSMODG00000017051	PRPF6	99	92.602	Monodelphis_domestica
ENSSMAG00000008112	prpf6	95	97.935	ENSMALG00000000089	prpf6	100	97.935	Monopterus_albus
ENSSMAG00000008112	prpf6	96	85.760	MGP_CAROLIEiJ_G0024814	Prpf6	100	90.741	Mus_caroli
ENSSMAG00000008112	prpf6	96	92.136	ENSMUSG00000002455	Prpf6	100	92.136	Mus_musculus
ENSSMAG00000008112	prpf6	96	92.136	MGP_PahariEiJ_G0026262	Prpf6	100	92.136	Mus_pahari
ENSSMAG00000008112	prpf6	96	92.136	MGP_SPRETEiJ_G0025741	Prpf6	100	92.136	Mus_spretus
ENSSMAG00000008112	prpf6	86	92.102	ENSMPUG00000008673	PRPF6	99	91.538	Mustela_putorius_furo
ENSSMAG00000008112	prpf6	96	92.242	ENSNGAG00000003365	Prpf6	100	92.242	Nannospalax_galili
ENSSMAG00000008112	prpf6	100	96.182	ENSNBRG00000015025	prpf6	100	96.182	Neolamprologus_brichardi
ENSSMAG00000008112	prpf6	96	91.180	ENSNLEG00000010208	PRPF6	100	91.180	Nomascus_leucogenys
ENSSMAG00000008112	prpf6	96	82.530	ENSMEUG00000009824	-	90	82.806	Notamacropus_eugenii
ENSSMAG00000008112	prpf6	96	86.185	ENSODEG00000004841	PRPF6	100	86.185	Octodon_degus
ENSSMAG00000008112	prpf6	100	96.285	ENSONIG00000017406	prpf6	100	96.285	Oreochromis_niloticus
ENSSMAG00000008112	prpf6	96	91.923	ENSOANG00000004920	PRPF6	100	91.923	Ornithorhynchus_anatinus
ENSSMAG00000008112	prpf6	95	89.807	ENSOCUG00000014151	PRPF6	100	89.807	Oryctolagus_cuniculus
ENSSMAG00000008112	prpf6	100	94.840	ENSORLG00000009592	prpf6	100	94.840	Oryzias_latipes
ENSSMAG00000008112	prpf6	100	94.737	ENSORLG00020001458	prpf6	100	94.737	Oryzias_latipes_hni
ENSSMAG00000008112	prpf6	100	94.737	ENSORLG00015018762	prpf6	100	94.737	Oryzias_latipes_hsok
ENSSMAG00000008112	prpf6	100	94.840	ENSOMEG00000012174	prpf6	100	94.840	Oryzias_melastigma
ENSSMAG00000008112	prpf6	96	84.820	ENSOGAG00000007573	PRPF6	100	84.820	Otolemur_garnettii
ENSSMAG00000008112	prpf6	96	91.180	ENSOARG00000008776	PRPF6	99	91.180	Ovis_aries
ENSSMAG00000008112	prpf6	96	91.286	ENSPPAG00000008686	PRPF6	100	91.286	Pan_paniscus
ENSSMAG00000008112	prpf6	96	91.711	ENSPPRG00000008497	PRPF6	100	91.711	Panthera_pardus
ENSSMAG00000008112	prpf6	93	91.603	ENSPTIG00000011184	PRPF6	97	91.603	Panthera_tigris_altaica
ENSSMAG00000008112	prpf6	96	91.286	ENSPTRG00000013765	PRPF6	100	91.286	Pan_troglodytes
ENSSMAG00000008112	prpf6	96	90.967	ENSPANG00000024135	PRPF6	100	90.967	Papio_anubis
ENSSMAG00000008112	prpf6	98	92.427	ENSPKIG00000005627	prpf6	99	94.255	Paramormyrops_kingsleyae
ENSSMAG00000008112	prpf6	90	91.497	ENSPSIG00000007717	PRPF6	100	91.497	Pelodiscus_sinensis
ENSSMAG00000008112	prpf6	100	94.330	ENSPMGG00000008925	prpf6	100	93.608	Periophthalmus_magnuspinnatus
ENSSMAG00000008112	prpf6	96	92.136	ENSPEMG00000016036	Prpf6	100	92.136	Peromyscus_maniculatus_bairdii
ENSSMAG00000008112	prpf6	97	86.828	ENSPMAG00000006144	prpf6	100	86.828	Petromyzon_marinus
ENSSMAG00000008112	prpf6	96	92.030	ENSPCIG00000017909	PRPF6	100	92.030	Phascolarctos_cinereus
ENSSMAG00000008112	prpf6	100	94.990	ENSPFOG00000006431	prpf6	99	94.990	Poecilia_formosa
ENSSMAG00000008112	prpf6	100	95.769	ENSPLAG00000005974	prpf6	100	95.769	Poecilia_latipinna
ENSSMAG00000008112	prpf6	100	95.872	ENSPMEG00000009977	prpf6	100	95.872	Poecilia_mexicana
ENSSMAG00000008112	prpf6	100	95.769	ENSPREG00000017993	prpf6	95	95.769	Poecilia_reticulata
ENSSMAG00000008112	prpf6	96	90.755	ENSPPYG00000011256	PRPF6	100	90.755	Pongo_abelii
ENSSMAG00000008112	prpf6	91	93.627	ENSPCAG00000006536	PRPF6	88	93.627	Procavia_capensis
ENSSMAG00000008112	prpf6	96	91.392	ENSPCOG00000016881	PRPF6	100	91.392	Propithecus_coquereli
ENSSMAG00000008112	prpf6	96	85.760	ENSPVAG00000014316	PRPF6	100	85.760	Pteropus_vampyrus
ENSSMAG00000008112	prpf6	100	82.341	ENSPNYG00000001939	prpf6	100	82.341	Pundamilia_nyererei
ENSSMAG00000008112	prpf6	97	94.386	ENSPNAG00000015606	prpf6	97	94.386	Pygocentrus_nattereri
ENSSMAG00000008112	prpf6	96	92.030	ENSRNOG00000051498	Prpf6	100	92.030	Rattus_norvegicus
ENSSMAG00000008112	prpf6	96	91.180	ENSRBIG00000043613	PRPF6	100	91.180	Rhinopithecus_bieti
ENSSMAG00000008112	prpf6	96	88.148	ENSRROG00000040969	PRPF6	98	91.349	Rhinopithecus_roxellana
ENSSMAG00000008112	prpf6	87	88.142	ENSSBOG00000020632	PRPF6	93	86.678	Saimiri_boliviensis_boliviensis
ENSSMAG00000008112	prpf6	96	92.030	ENSSHAG00000016810	PRPF6	100	92.030	Sarcophilus_harrisii
ENSSMAG00000008112	prpf6	95	94.301	ENSSFOG00015020859	prpf6	100	94.301	Scleropages_formosus
ENSSMAG00000008112	prpf6	100	97.110	ENSSDUG00000016142	prpf6	100	97.110	Seriola_dumerili
ENSSMAG00000008112	prpf6	100	97.110	ENSSLDG00000025283	prpf6	99	97.110	Seriola_lalandi_dorsalis
ENSSMAG00000008112	prpf6	90	90.238	ENSSPUG00000018260	PRPF6	100	90.238	Sphenodon_punctatus
ENSSMAG00000008112	prpf6	100	97.007	ENSSPAG00000015850	prpf6	100	97.007	Stegastes_partitus
ENSSMAG00000008112	prpf6	97	90.262	ENSSSCG00000029119	PRPF6	100	90.816	Sus_scrofa
ENSSMAG00000008112	prpf6	96	91.631	ENSTGUG00000007221	PRPF6	100	91.631	Taeniopygia_guttata
ENSSMAG00000008112	prpf6	100	95.666	ENSTRUG00000002920	prpf6	100	95.666	Takifugu_rubripes
ENSSMAG00000008112	prpf6	96	89.692	ENSTNIG00000017873	prpf6	100	89.692	Tetraodon_nigroviridis
ENSSMAG00000008112	prpf6	85	93.333	ENSTBEG00000005348	PRPF6	85	93.333	Tupaia_belangeri
ENSSMAG00000008112	prpf6	96	91.392	ENSTTRG00000013068	PRPF6	100	91.392	Tursiops_truncatus
ENSSMAG00000008112	prpf6	99	86.509	ENSUMAG00000021631	PRPF6	98	90.185	Ursus_maritimus
ENSSMAG00000008112	prpf6	96	91.711	ENSVVUG00000014948	PRPF6	100	91.711	Vulpes_vulpes
ENSSMAG00000008112	prpf6	99	89.752	ENSXETG00000012054	prpf6	97	91.702	Xenopus_tropicalis
ENSSMAG00000008112	prpf6	100	95.975	ENSXCOG00000008082	prpf6	100	95.975	Xiphophorus_couchianus
ENSSMAG00000008112	prpf6	100	95.975	ENSXMAG00000015581	prpf6	100	95.975	Xiphophorus_maculatus