EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000008147 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: si:dkey-33c12.4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 13051 bases
Position: chr17:2638158-2651208
Accession: ZDB-GENE-030131-2527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000013252	RRM_1	PF00076.22	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000013424	-	4290	-	ENSSMAP00000013252	665 (aa)	-	A0A2U9CHH4

Gene Model

Click here to download ENSSMAG00000008147's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000008147	si:dkey-33c12.4	51	42.373	ENSSMAG00000010960	-	75	36.782
ENSSMAG00000008147	si:dkey-33c12.4	66	30.238	ENSSMAG00000002904	zgc:123010	59	43.791

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008147	si:dkey-33c12.4	57	30.964	ENSAPOG00000019633	zgc:123010	59	31.367	Acanthochromis_polyacanthus
ENSSMAG00000008147	si:dkey-33c12.4	99	60.000	ENSAPOG00000005058	si:dkey-33c12.4	99	59.440	Acanthochromis_polyacanthus
ENSSMAG00000008147	si:dkey-33c12.4	51	43.305	ENSAPOG00000022403	-	79	36.194	Acanthochromis_polyacanthus
ENSSMAG00000008147	si:dkey-33c12.4	98	60.210	ENSAOCG00000020066	si:dkey-33c12.4	96	60.360	Amphiprion_ocellaris
ENSSMAG00000008147	si:dkey-33c12.4	51	42.450	ENSAOCG00000000431	-	79	36.549	Amphiprion_ocellaris
ENSSMAG00000008147	si:dkey-33c12.4	54	31.099	ENSAOCG00000005910	zgc:123010	59	31.099	Amphiprion_ocellaris
ENSSMAG00000008147	si:dkey-33c12.4	57	30.964	ENSAPEG00000014305	zgc:123010	62	31.367	Amphiprion_percula
ENSSMAG00000008147	si:dkey-33c12.4	51	42.090	ENSAPEG00000023603	-	79	36.481	Amphiprion_percula
ENSSMAG00000008147	si:dkey-33c12.4	54	40.650	ENSATEG00000018302	-	81	34.791	Anabas_testudineus
ENSSMAG00000008147	si:dkey-33c12.4	100	62.742	ENSATEG00000018885	si:dkey-33c12.4	100	61.550	Anabas_testudineus
ENSSMAG00000008147	si:dkey-33c12.4	54	30.978	ENSACLG00000010188	zgc:123010	60	30.997	Astatotilapia_calliptera
ENSSMAG00000008147	si:dkey-33c12.4	51	40.608	ENSACLG00000003019	-	85	36.015	Astatotilapia_calliptera
ENSSMAG00000008147	si:dkey-33c12.4	99	60.688	ENSACLG00000014192	si:dkey-33c12.4	99	59.815	Astatotilapia_calliptera
ENSSMAG00000008147	si:dkey-33c12.4	96	37.243	ENSAMXG00000010871	si:dkey-33c12.4	97	36.788	Astyanax_mexicanus
ENSSMAG00000008147	si:dkey-33c12.4	59	31.095	ENSAMXG00000041967	zgc:123010	56	32.591	Astyanax_mexicanus
ENSSMAG00000008147	si:dkey-33c12.4	58	35.250	ENSCPBG00000024454	-	76	32.696	Chrysemys_picta_bellii
ENSSMAG00000008147	si:dkey-33c12.4	76	34.783	ENSCSEG00000002755	-	84	35.526	Cynoglossus_semilaevis
ENSSMAG00000008147	si:dkey-33c12.4	60	38.942	ENSCVAG00000004187	-	80	35.644	Cyprinodon_variegatus
ENSSMAG00000008147	si:dkey-33c12.4	99	53.765	ENSCVAG00000006564	-	99	54.367	Cyprinodon_variegatus
ENSSMAG00000008147	si:dkey-33c12.4	57	30.591	ENSCVAG00000013288	zgc:123010	60	30.728	Cyprinodon_variegatus
ENSSMAG00000008147	si:dkey-33c12.4	96	37.234	ENSDARG00000057890	si:dkey-33c12.4	97	37.348	Danio_rerio
ENSSMAG00000008147	si:dkey-33c12.4	96	37.791	ENSELUG00000002009	si:dkey-33c12.4	97	38.248	Esox_lucius
ENSSMAG00000008147	si:dkey-33c12.4	82	35.676	ENSELUG00000001633	-	84	34.912	Esox_lucius
ENSSMAG00000008147	si:dkey-33c12.4	99	57.784	ENSFHEG00000005521	si:dkey-33c12.4	99	57.526	Fundulus_heteroclitus
ENSSMAG00000008147	si:dkey-33c12.4	51	41.954	ENSFHEG00000009983	-	77	36.383	Fundulus_heteroclitus
ENSSMAG00000008147	si:dkey-33c12.4	66	32.743	ENSGAFG00000009373	zgc:123010	81	32.743	Gambusia_affinis
ENSSMAG00000008147	si:dkey-33c12.4	50	40.741	ENSGAFG00000016594	-	76	34.394	Gambusia_affinis
ENSSMAG00000008147	si:dkey-33c12.4	99	57.444	ENSGAFG00000017596	si:dkey-33c12.4	99	58.982	Gambusia_affinis
ENSSMAG00000008147	si:dkey-33c12.4	57	30.848	ENSGACG00000007620	zgc:123010	83	31.267	Gasterosteus_aculeatus
ENSSMAG00000008147	si:dkey-33c12.4	99	60.928	ENSHBUG00000010735	si:dkey-33c12.4	99	60.329	Haplochromis_burtoni
ENSSMAG00000008147	si:dkey-33c12.4	85	38.966	ENSIPUG00000005998	si:dkey-33c12.4	98	35.977	Ictalurus_punctatus
ENSSMAG00000008147	si:dkey-33c12.4	99	59.880	ENSKMAG00000016610	si:dkey-33c12.4	99	59.940	Kryptolebias_marmoratus
ENSSMAG00000008147	si:dkey-33c12.4	91	60.000	ENSLBEG00000017203	-	99	59.217	Labrus_bergylta
ENSSMAG00000008147	si:dkey-33c12.4	53	32.884	ENSLBEG00000023984	zgc:123010	59	32.884	Labrus_bergylta
ENSSMAG00000008147	si:dkey-33c12.4	61	38.028	ENSLBEG00000028046	-	86	32.828	Labrus_bergylta
ENSSMAG00000008147	si:dkey-33c12.4	99	59.314	ENSLBEG00000021088	-	99	59.524	Labrus_bergylta
ENSSMAG00000008147	si:dkey-33c12.4	84	37.031	ENSLOCG00000001861	-	81	37.308	Lepisosteus_oculatus
ENSSMAG00000008147	si:dkey-33c12.4	51	30.769	ENSMAMG00000001145	zgc:123010	72	40.816	Mastacembelus_armatus
ENSSMAG00000008147	si:dkey-33c12.4	78	35.046	ENSMAMG00000004311	-	54	43.161	Mastacembelus_armatus
ENSSMAG00000008147	si:dkey-33c12.4	99	64.211	ENSMAMG00000000111	si:dkey-33c12.4	99	63.855	Mastacembelus_armatus
ENSSMAG00000008147	si:dkey-33c12.4	54	30.978	ENSMZEG00005027733	zgc:123010	60	30.997	Maylandia_zebra
ENSSMAG00000008147	si:dkey-33c12.4	55	39.744	ENSMZEG00005000585	-	85	34.955	Maylandia_zebra
ENSSMAG00000008147	si:dkey-33c12.4	99	60.538	ENSMZEG00005014276	si:dkey-33c12.4	99	59.940	Maylandia_zebra
ENSSMAG00000008147	si:dkey-33c12.4	54	41.711	ENSMALG00000003167	-	50	42.274	Monopterus_albus
ENSSMAG00000008147	si:dkey-33c12.4	99	65.367	ENSMALG00000002265	si:dkey-33c12.4	99	64.918	Monopterus_albus
ENSSMAG00000008147	si:dkey-33c12.4	54	31.806	ENSMALG00000017698	zgc:123010	60	32.075	Monopterus_albus
ENSSMAG00000008147	si:dkey-33c12.4	51	40.896	ENSONIG00000007538	-	89	54.321	Oreochromis_niloticus
ENSSMAG00000008147	si:dkey-33c12.4	50	40.503	ENSORLG00000030385	-	51	41.304	Oryzias_latipes
ENSSMAG00000008147	si:dkey-33c12.4	98	48.946	ENSORLG00000029651	si:dkey-33c12.4	97	48.120	Oryzias_latipes
ENSSMAG00000008147	si:dkey-33c12.4	55	30.159	ENSORLG00000007675	zgc:123010	52	31.922	Oryzias_latipes
ENSSMAG00000008147	si:dkey-33c12.4	55	30.423	ENSORLG00020003457	zgc:123010	52	32.248	Oryzias_latipes_hni
ENSSMAG00000008147	si:dkey-33c12.4	97	49.011	ENSORLG00020008750	si:dkey-33c12.4	97	46.915	Oryzias_latipes_hni
ENSSMAG00000008147	si:dkey-33c12.4	51	40.669	ENSORLG00015008400	-	51	40.367	Oryzias_latipes_hsok
ENSSMAG00000008147	si:dkey-33c12.4	98	48.748	ENSOMEG00000008913	-	98	47.570	Oryzias_melastigma
ENSSMAG00000008147	si:dkey-33c12.4	50	40.390	ENSOMEG00000009428	-	50	42.812	Oryzias_melastigma
ENSSMAG00000008147	si:dkey-33c12.4	90	35.474	ENSPKIG00000011819	-	78	37.018	Paramormyrops_kingsleyae
ENSSMAG00000008147	si:dkey-33c12.4	99	58.021	ENSPFOG00000009143	si:dkey-33c12.4	99	59.138	Poecilia_formosa
ENSSMAG00000008147	si:dkey-33c12.4	57	31.282	ENSPFOG00000001073	zgc:123010	60	31.536	Poecilia_formosa
ENSSMAG00000008147	si:dkey-33c12.4	50	40.341	ENSPFOG00000017092	-	91	35.378	Poecilia_formosa
ENSSMAG00000008147	si:dkey-33c12.4	57	31.282	ENSPLAG00000007711	zgc:123010	60	31.536	Poecilia_latipinna
ENSSMAG00000008147	si:dkey-33c12.4	96	58.230	ENSPLAG00000022537	si:dkey-33c12.4	99	59.538	Poecilia_latipinna
ENSSMAG00000008147	si:dkey-33c12.4	50	40.741	ENSPMEG00000009905	-	82	34.686	Poecilia_mexicana
ENSSMAG00000008147	si:dkey-33c12.4	57	31.282	ENSPMEG00000005092	zgc:123010	60	31.536	Poecilia_mexicana
ENSSMAG00000008147	si:dkey-33c12.4	99	57.571	ENSPMEG00000015590	si:dkey-33c12.4	99	58.395	Poecilia_mexicana
ENSSMAG00000008147	si:dkey-33c12.4	50	41.193	ENSPREG00000016861	-	84	35.359	Poecilia_reticulata
ENSSMAG00000008147	si:dkey-33c12.4	99	60.688	ENSPNYG00000018262	si:dkey-33c12.4	99	60.090	Pundamilia_nyererei
ENSSMAG00000008147	si:dkey-33c12.4	54	31.250	ENSPNYG00000007893	zgc:123010	60	31.536	Pundamilia_nyererei
ENSSMAG00000008147	si:dkey-33c12.4	55	40.256	ENSPNYG00000001047	-	85	36.197	Pundamilia_nyererei
ENSSMAG00000008147	si:dkey-33c12.4	97	35.935	ENSPNAG00000018386	si:dkey-33c12.4	97	35.277	Pygocentrus_nattereri
ENSSMAG00000008147	si:dkey-33c12.4	54	30.769	ENSSFOG00015021394	zgc:123010	59	43.478	Scleropages_formosus
ENSSMAG00000008147	si:dkey-33c12.4	79	36.697	ENSSFOG00015009199	-	81	36.615	Scleropages_formosus
ENSSMAG00000008147	si:dkey-33c12.4	54	43.611	ENSSFOG00015005186	-	86	36.806	Scleropages_formosus
ENSSMAG00000008147	si:dkey-33c12.4	51	43.956	ENSSDUG00000010976	-	83	36.314	Seriola_dumerili
ENSSMAG00000008147	si:dkey-33c12.4	54	32.095	ENSSDUG00000008651	zgc:123010	58	32.267	Seriola_dumerili
ENSSMAG00000008147	si:dkey-33c12.4	50	33.929	ENSSDUG00000014026	-	82	33.099	Seriola_dumerili
ENSSMAG00000008147	si:dkey-33c12.4	99	69.461	ENSSDUG00000003213	si:dkey-33c12.4	99	70.310	Seriola_dumerili
ENSSMAG00000008147	si:dkey-33c12.4	51	43.539	ENSSLDG00000012846	-	86	36.984	Seriola_lalandi_dorsalis
ENSSMAG00000008147	si:dkey-33c12.4	99	69.611	ENSSLDG00000009448	si:dkey-33c12.4	99	69.058	Seriola_lalandi_dorsalis
ENSSMAG00000008147	si:dkey-33c12.4	54	32.095	ENSSLDG00000019386	zgc:123010	61	32.267	Seriola_lalandi_dorsalis
ENSSMAG00000008147	si:dkey-33c12.4	99	63.111	ENSSPAG00000022577	-	99	62.722	Stegastes_partitus
ENSSMAG00000008147	si:dkey-33c12.4	51	42.735	ENSSPAG00000004843	-	79	35.478	Stegastes_partitus
ENSSMAG00000008147	si:dkey-33c12.4	57	31.969	ENSSPAG00000013621	zgc:123010	59	32.440	Stegastes_partitus
ENSSMAG00000008147	si:dkey-33c12.4	53	30.328	ENSTRUG00000024824	zgc:123010	60	30.874	Takifugu_rubripes
ENSSMAG00000008147	si:dkey-33c12.4	57	58.901	ENSTRUG00000022374	si:dkey-33c12.4	91	48.421	Takifugu_rubripes
ENSSMAG00000008147	si:dkey-33c12.4	52	37.356	ENSTRUG00000000057	-	52	37.615	Takifugu_rubripes
ENSSMAG00000008147	si:dkey-33c12.4	52	30.854	ENSXCOG00000012281	zgc:123010	72	31.129	Xiphophorus_couchianus
ENSSMAG00000008147	si:dkey-33c12.4	99	57.571	ENSXMAG00000018535	si:dkey-33c12.4	99	59.254	Xiphophorus_maculatus
ENSSMAG00000008147	si:dkey-33c12.4	57	31.282	ENSXMAG00000002598	zgc:123010	60	31.536	Xiphophorus_maculatus