EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000008308 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3970 bases
Position: chr18:18601604-18605573
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	1	10
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	2	10
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	3	10
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	4	10
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	5	10
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	6	10
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	7	10
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	8	10
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	9	10
ENSSMAP00000013559	zf-C2H2	PF00096.26	1.2e-57	10	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	1	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	2	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	3	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	4	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	5	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	6	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	7	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	8	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	9	10
ENSSMAP00000013518	zf-C2H2	PF00096.26	3.3e-57	10	10
ENSSMAP00000013559	zf-met	PF12874.7	0.00051	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000013693	-	2970	-	ENSSMAP00000013518	929 (aa)	-	A0A2U9CQL3
ENSSMAT00000013736	-	3061	-	ENSSMAP00000013559	875 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000008308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000008308	-	78	30.293	ENSSMAG00000014864	-	86	44.000
ENSSMAG00000008308	-	68	37.234	ENSSMAG00000015041	si:dkey-7i4.5	91	37.234
ENSSMAG00000008308	-	80	39.175	ENSSMAG00000021271	-	66	39.175
ENSSMAG00000008308	-	77	30.877	ENSSMAG00000013828	-	65	30.877
ENSSMAG00000008308	-	70	41.520	ENSSMAG00000009685	-	86	41.520
ENSSMAG00000008308	-	55	41.593	ENSSMAG00000006155	-	62	41.593
ENSSMAG00000008308	-	79	40.310	ENSSMAG00000009609	-	92	46.296
ENSSMAG00000008308	-	67	34.722	ENSSMAG00000019949	-	57	50.769
ENSSMAG00000008308	-	68	32.292	ENSSMAG00000014597	-	67	32.292
ENSSMAG00000008308	-	79	46.939	ENSSMAG00000007561	znf236	76	46.939
ENSSMAG00000008308	-	69	40.789	ENSSMAG00000004252	-	88	38.129
ENSSMAG00000008308	-	69	31.646	ENSSMAG00000013676	-	81	31.313
ENSSMAG00000008308	-	68	33.493	ENSSMAG00000014844	-	83	43.478
ENSSMAG00000008308	-	61	36.970	ENSSMAG00000002782	gfi1ab	53	36.970
ENSSMAG00000008308	-	69	30.000	ENSSMAG00000008907	zbtb41	63	30.000
ENSSMAG00000008308	-	80	38.406	ENSSMAG00000003594	-	86	38.406
ENSSMAG00000008308	-	77	46.218	ENSSMAG00000005076	-	91	54.015
ENSSMAG00000008308	-	68	36.842	ENSSMAG00000017045	-	54	36.842
ENSSMAG00000008308	-	93	33.228	ENSSMAG00000018844	prdm5	97	33.228
ENSSMAG00000008308	-	61	42.308	ENSSMAG00000006825	-	83	42.308
ENSSMAG00000008308	-	63	35.329	ENSSMAG00000000404	-	85	35.329
ENSSMAG00000008308	-	76	32.000	ENSSMAG00000000056	-	70	32.278
ENSSMAG00000008308	-	59	35.758	ENSSMAG00000015181	gfi1b	69	31.313
ENSSMAG00000008308	-	80	34.395	ENSSMAG00000015347	-	87	34.395
ENSSMAG00000008308	-	69	49.254	ENSSMAG00000006197	-	88	50.000
ENSSMAG00000008308	-	78	36.964	ENSSMAG00000019980	-	68	36.964
ENSSMAG00000008308	-	63	39.259	ENSSMAG00000004429	-	83	39.259
ENSSMAG00000008308	-	82	42.056	ENSSMAG00000013663	-	96	51.961
ENSSMAG00000008308	-	68	33.597	ENSSMAG00000015282	-	80	33.597
ENSSMAG00000008308	-	79	37.226	ENSSMAG00000009020	znf526	61	37.226
ENSSMAG00000008308	-	67	37.278	ENSSMAG00000017485	-	50	30.903
ENSSMAG00000008308	-	78	43.023	ENSSMAG00000021251	-	98	43.023
ENSSMAG00000008308	-	68	42.963	ENSSMAG00000009115	-	88	51.515
ENSSMAG00000008308	-	77	36.364	ENSSMAG00000013291	-	98	41.176
ENSSMAG00000008308	-	72	34.058	ENSSMAG00000007380	znf710b	59	35.398
ENSSMAG00000008308	-	69	32.168	ENSSMAG00000015356	-	91	34.320

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008308	-	98	70.069	ENSAPOG00000008319	-	97	69.978	Acanthochromis_polyacanthus
ENSSMAG00000008308	-	64	34.815	ENSAPOG00000019138	-	60	34.815	Acanthochromis_polyacanthus
ENSSMAG00000008308	-	52	40.323	ENSACIG00000017892	-	80	34.021	Amphilophus_citrinellus
ENSSMAG00000008308	-	55	47.518	ENSACIG00000007464	-	50	47.518	Amphilophus_citrinellus
ENSSMAG00000008308	-	68	32.389	ENSAOCG00000016897	-	72	36.316	Amphiprion_ocellaris
ENSSMAG00000008308	-	85	68.248	ENSAOCG00000014769	-	96	68.248	Amphiprion_ocellaris
ENSSMAG00000008308	-	96	69.942	ENSAOCG00000015944	-	99	69.942	Amphiprion_ocellaris
ENSSMAG00000008308	-	69	31.984	ENSAPEG00000001556	-	72	36.316	Amphiprion_percula
ENSSMAG00000008308	-	59	37.037	ENSAPEG00000010013	-	65	37.692	Amphiprion_percula
ENSSMAG00000008308	-	79	41.892	ENSATEG00000018931	-	96	38.421	Anabas_testudineus
ENSSMAG00000008308	-	73	35.102	ENSACLG00000005694	-	54	35.102	Astatotilapia_calliptera
ENSSMAG00000008308	-	63	53.333	ENSAMXG00000029518	-	68	53.333	Astyanax_mexicanus
ENSSMAG00000008308	-	67	37.383	ENSCSEG00000008525	-	50	41.317	Cynoglossus_semilaevis
ENSSMAG00000008308	-	59	43.382	ENSCSEG00000010453	-	63	44.118	Cynoglossus_semilaevis
ENSSMAG00000008308	-	59	40.719	ENSCVAG00000015616	-	75	40.719	Cyprinodon_variegatus
ENSSMAG00000008308	-	79	38.922	ENSCVAG00000003250	-	98	38.922	Cyprinodon_variegatus
ENSSMAG00000008308	-	58	37.281	ENSEBUG00000002290	-	51	37.281	Eptatretus_burgeri
ENSSMAG00000008308	-	65	32.000	ENSELUG00000020882	-	51	32.000	Esox_lucius
ENSSMAG00000008308	-	69	32.765	ENSELUG00000001909	-	79	32.738	Esox_lucius
ENSSMAG00000008308	-	68	49.000	ENSELUG00000024007	-	80	37.313	Esox_lucius
ENSSMAG00000008308	-	58	47.445	ENSFHEG00000023184	-	52	47.445	Fundulus_heteroclitus
ENSSMAG00000008308	-	58	36.970	ENSGAFG00000008204	-	64	36.970	Gambusia_affinis
ENSSMAG00000008308	-	59	48.062	ENSGAFG00000001879	-	64	48.062	Gambusia_affinis
ENSSMAG00000008308	-	70	35.102	ENSHBUG00000006656	-	67	35.102	Haplochromis_burtoni
ENSSMAG00000008308	-	68	40.517	ENSHCOG00000013489	-	89	40.517	Hippocampus_comes
ENSSMAG00000008308	-	63	41.104	ENSHCOG00000001873	-	64	41.104	Hippocampus_comes
ENSSMAG00000008308	-	63	41.104	ENSHCOG00000008550	-	64	41.104	Hippocampus_comes
ENSSMAG00000008308	-	58	46.552	ENSHCOG00000015497	-	90	46.552	Hippocampus_comes
ENSSMAG00000008308	-	67	32.061	ENSKMAG00000007699	-	62	32.061	Kryptolebias_marmoratus
ENSSMAG00000008308	-	57	46.078	ENSLBEG00000006161	-	93	46.078	Labrus_bergylta
ENSSMAG00000008308	-	77	47.328	ENSLBEG00000001132	-	99	47.328	Labrus_bergylta
ENSSMAG00000008308	-	59	36.413	ENSLBEG00000011210	-	61	36.413	Labrus_bergylta
ENSSMAG00000008308	-	66	35.556	ENSLBEG00000017424	-	91	35.556	Labrus_bergylta
ENSSMAG00000008308	-	76	40.000	ENSLOCG00000004208	-	99	41.358	Lepisosteus_oculatus
ENSSMAG00000008308	-	77	38.922	ENSMAMG00000017939	-	94	38.922	Mastacembelus_armatus
ENSSMAG00000008308	-	55	33.636	ENSMZEG00005013907	-	77	33.182	Maylandia_zebra
ENSSMAG00000008308	-	59	40.141	ENSMALG00000004279	-	84	40.141	Monopterus_albus
ENSSMAG00000008308	-	98	71.083	ENSONIG00000007967	-	96	70.300	Oreochromis_niloticus
ENSSMAG00000008308	-	79	32.394	ENSORLG00000002268	-	94	32.394	Oryzias_latipes
ENSSMAG00000008308	-	55	37.766	ENSORLG00000021885	-	62	50.000	Oryzias_latipes
ENSSMAG00000008308	-	59	37.097	ENSORLG00020018921	-	92	37.097	Oryzias_latipes_hni
ENSSMAG00000008308	-	53	38.587	ENSORLG00015018099	-	69	38.587	Oryzias_latipes_hsok
ENSSMAG00000008308	-	60	45.255	ENSOMEG00000005578	-	78	45.255	Oryzias_melastigma
ENSSMAG00000008308	-	77	36.792	ENSPMGG00000009571	-	78	41.250	Periophthalmus_magnuspinnatus
ENSSMAG00000008308	-	51	39.336	ENSPMGG00000007051	-	65	39.200	Periophthalmus_magnuspinnatus
ENSSMAG00000008308	-	69	33.796	ENSPMGG00000006928	-	54	33.796	Periophthalmus_magnuspinnatus
ENSSMAG00000008308	-	55	40.678	ENSPMGG00000019750	-	97	40.678	Periophthalmus_magnuspinnatus
ENSSMAG00000008308	-	57	34.911	ENSPMAG00000004189	-	98	34.911	Petromyzon_marinus
ENSSMAG00000008308	-	80	40.123	ENSPFOG00000018860	-	100	40.123	Poecilia_formosa
ENSSMAG00000008308	-	60	40.252	ENSPFOG00000009491	-	61	40.252	Poecilia_formosa
ENSSMAG00000008308	-	50	39.645	ENSPLAG00000010067	-	84	39.645	Poecilia_latipinna
ENSSMAG00000008308	-	59	39.521	ENSPLAG00000008941	-	96	39.521	Poecilia_latipinna
ENSSMAG00000008308	-	53	36.029	ENSPLAG00000014832	-	96	36.029	Poecilia_latipinna
ENSSMAG00000008308	-	60	40.252	ENSPMEG00000024117	-	61	40.252	Poecilia_mexicana
ENSSMAG00000008308	-	62	31.203	ENSPMEG00000002953	-	68	31.203	Poecilia_mexicana
ENSSMAG00000008308	-	53	36.029	ENSPMEG00000005210	-	96	36.029	Poecilia_mexicana
ENSSMAG00000008308	-	58	40.645	ENSPNYG00000017888	-	59	46.154	Pundamilia_nyererei
ENSSMAG00000008308	-	60	37.912	ENSPNAG00000005946	-	89	37.912	Pygocentrus_nattereri
ENSSMAG00000008308	-	98	76.327	ENSSDUG00000013048	-	99	76.327	Seriola_dumerili
ENSSMAG00000008308	-	100	79.789	ENSSLDG00000011849	-	100	79.579	Seriola_lalandi_dorsalis
ENSSMAG00000008308	-	69	31.532	ENSSLDG00000014436	-	73	32.609	Seriola_lalandi_dorsalis
ENSSMAG00000008308	-	57	35.889	ENSSPAG00000011544	-	59	35.889	Stegastes_partitus
ENSSMAG00000008308	-	54	45.133	ENSSPAG00000011533	-	80	45.133	Stegastes_partitus
ENSSMAG00000008308	-	77	46.789	ENSXETG00000012506	znf91	100	46.789	Xenopus_tropicalis
ENSSMAG00000008308	-	68	37.736	ENSXCOG00000003441	-	57	37.736	Xiphophorus_couchianus
ENSSMAG00000008308	-	60	42.537	ENSXCOG00000020768	-	76	42.537	Xiphophorus_couchianus