EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000008472 (Gene tree)
Gene ID: -
Gene Symbol: secisbp2
Alias: im:7147048|si:ch211-261c8.1
Full Name: SECIS binding protein 2
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 6075 bases
Position: chr9:19387768-19393842
Accession: ZDB-GENE-050208-263
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000013840	Ribosomal_L7Ae	PF01248.26	3.9e-20	1	1
ENSSMAP00000013820	Ribosomal_L7Ae	PF01248.26	5.3e-20	1	1
ENSSMAP00000013789	Ribosomal_L7Ae	PF01248.26	5.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000014004	-	2409	-	ENSSMAP00000013820	802 (aa)	-	-
ENSSMAT00000014024	-	2581	-	ENSSMAP00000013840	660 (aa)	-	-
ENSSMAT00000013971	-	2499	-	ENSSMAP00000013789	832 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000008472's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008472's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008472	secisbp2	62	44.496	ENSG00000138593	SECISBP2L	58	46.053	Homo_sapiens
ENSSMAG00000008472	secisbp2	76	49.119	ENSG00000187742	SECISBP2	58	49.609	Homo_sapiens
ENSSMAG00000008472	secisbp2	100	73.724	ENSAPOG00000005939	secisbp2	98	71.393	Acanthochromis_polyacanthus
ENSSMAG00000008472	secisbp2	76	49.603	ENSAMEG00000003349	SECISBP2	54	48.155	Ailuropoda_melanoleuca
ENSSMAG00000008472	secisbp2	85	57.829	ENSACIG00000024185	secisbp2	96	58.036	Amphilophus_citrinellus
ENSSMAG00000008472	secisbp2	100	75.412	ENSAOCG00000019052	secisbp2	98	72.174	Amphiprion_ocellaris
ENSSMAG00000008472	secisbp2	100	74.513	ENSAPEG00000012971	secisbp2	98	72.050	Amphiprion_percula
ENSSMAG00000008472	secisbp2	100	76.205	ENSATEG00000001095	secisbp2	98	71.357	Anabas_testudineus
ENSSMAG00000008472	secisbp2	86	38.240	ENSATEG00000018252	SECISBP2L	50	39.576	Anabas_testudineus
ENSSMAG00000008472	secisbp2	62	47.406	ENSAPLG00000004694	SECISBP2L	55	39.769	Anas_platyrhynchos
ENSSMAG00000008472	secisbp2	87	45.302	ENSAPLG00000013053	SECISBP2	63	44.728	Anas_platyrhynchos
ENSSMAG00000008472	secisbp2	84	39.379	ENSACAG00000006021	SECISBP2L	55	40.165	Anolis_carolinensis
ENSSMAG00000008472	secisbp2	90	44.172	ENSACAG00000016594	SECISBP2	72	45.584	Anolis_carolinensis
ENSSMAG00000008472	secisbp2	76	48.627	ENSANAG00000028208	SECISBP2	65	43.411	Aotus_nancymaae
ENSSMAG00000008472	secisbp2	99	70.997	ENSACLG00000019976	secisbp2	99	66.998	Astatotilapia_calliptera
ENSSMAG00000008472	secisbp2	98	54.692	ENSAMXG00000015953	secisbp2	96	50.379	Astyanax_mexicanus
ENSSMAG00000008472	secisbp2	76	51.287	ENSBTAG00000001939	SECISBP2	62	51.148	Bos_taurus
ENSSMAG00000008472	secisbp2	76	49.608	ENSCJAG00000007806	SECISBP2	53	49.216	Callithrix_jacchus
ENSSMAG00000008472	secisbp2	76	49.802	ENSCAFG00000002188	SECISBP2	53	48.611	Canis_familiaris
ENSSMAG00000008472	secisbp2	76	49.802	ENSCAFG00020007224	SECISBP2	53	48.611	Canis_lupus_dingo
ENSSMAG00000008472	secisbp2	76	50.693	ENSCHIG00000010657	SECISBP2	52	50.395	Capra_hircus
ENSSMAG00000008472	secisbp2	76	46.289	ENSTSYG00000014119	SECISBP2	57	47.276	Carlito_syrichta
ENSSMAG00000008472	secisbp2	58	52.564	ENSCAPG00000008522	SECISBP2	53	53.061	Cavia_aperea
ENSSMAG00000008472	secisbp2	76	49.405	ENSCPOG00000014270	SECISBP2	53	49.802	Cavia_porcellus
ENSSMAG00000008472	secisbp2	76	50.000	ENSCCAG00000013350	SECISBP2	76	41.860	Cebus_capucinus
ENSSMAG00000008472	secisbp2	76	48.039	ENSCATG00000008304	SECISBP2	64	42.791	Cercocebus_atys
ENSSMAG00000008472	secisbp2	75	50.301	ENSCLAG00000001166	SECISBP2	51	50.499	Chinchilla_lanigera
ENSSMAG00000008472	secisbp2	76	49.216	ENSCSAG00000007310	SECISBP2	53	48.824	Chlorocebus_sabaeus
ENSSMAG00000008472	secisbp2	74	50.988	ENSCPBG00000005608	SECISBP2	97	51.866	Chrysemys_picta_bellii
ENSSMAG00000008472	secisbp2	76	49.412	ENSCANG00000034551	SECISBP2	57	49.216	Colobus_angolensis_palliatus
ENSSMAG00000008472	secisbp2	76	47.421	ENSCGRG00001013930	Secisbp2	53	47.826	Cricetulus_griseus_chok1gshd
ENSSMAG00000008472	secisbp2	76	47.421	ENSCGRG00000002600	Secisbp2	53	48.024	Cricetulus_griseus_crigri
ENSSMAG00000008472	secisbp2	59	53.470	ENSCSEG00000010220	-	94	53.985	Cynoglossus_semilaevis
ENSSMAG00000008472	secisbp2	99	59.480	ENSCVAG00000015876	secisbp2	97	55.528	Cyprinodon_variegatus
ENSSMAG00000008472	secisbp2	88	56.973	ENSDARG00000073892	secisbp2	98	57.993	Danio_rerio
ENSSMAG00000008472	secisbp2	76	49.902	ENSDNOG00000009432	SECISBP2	52	50.292	Dasypus_novemcinctus
ENSSMAG00000008472	secisbp2	83	46.631	ENSDORG00000023182	Secisbp2	76	41.562	Dipodomys_ordii
ENSSMAG00000008472	secisbp2	57	43.455	ENSEBUG00000008208	secisbp2	89	44.258	Eptatretus_burgeri
ENSSMAG00000008472	secisbp2	76	50.984	ENSEASG00005013960	SECISBP2	54	52.165	Equus_asinus_asinus
ENSSMAG00000008472	secisbp2	76	51.190	ENSECAG00000015868	SECISBP2	54	52.620	Equus_caballus
ENSSMAG00000008472	secisbp2	68	59.732	ENSELUG00000014795	-	93	59.732	Esox_lucius
ENSSMAG00000008472	secisbp2	76	48.824	ENSFCAG00000004214	SECISBP2	57	47.885	Felis_catus
ENSSMAG00000008472	secisbp2	86	46.330	ENSFALG00000012441	SECISBP2	64	48.235	Ficedula_albicollis
ENSSMAG00000008472	secisbp2	76	50.199	ENSFDAG00000021183	SECISBP2	51	50.397	Fukomys_damarensis
ENSSMAG00000008472	secisbp2	99	63.030	ENSFHEG00000004095	secisbp2	98	59.449	Fundulus_heteroclitus
ENSSMAG00000008472	secisbp2	50	71.739	ENSGMOG00000017234	secisbp2	70	69.732	Gadus_morhua
ENSSMAG00000008472	secisbp2	62	47.406	ENSGALG00000041362	SECISBP2L	54	41.166	Gallus_gallus
ENSSMAG00000008472	secisbp2	88	47.222	ENSGALG00000010694	SECISBP2	63	46.470	Gallus_gallus
ENSSMAG00000008472	secisbp2	99	63.636	ENSGAFG00000016947	secisbp2	97	60.050	Gambusia_affinis
ENSSMAG00000008472	secisbp2	98	68.971	ENSGACG00000013757	secisbp2	100	69.432	Gasterosteus_aculeatus
ENSSMAG00000008472	secisbp2	76	49.119	ENSGGOG00000000453	SECISBP2	59	49.593	Gorilla_gorilla
ENSSMAG00000008472	secisbp2	65	75.701	ENSHBUG00000007014	secisbp2	99	74.766	Haplochromis_burtoni
ENSSMAG00000008472	secisbp2	78	48.560	ENSHGLG00000014380	SECISBP2	73	41.298	Heterocephalus_glaber_female
ENSSMAG00000008472	secisbp2	78	48.560	ENSHGLG00100006953	SECISBP2	73	41.298	Heterocephalus_glaber_male
ENSSMAG00000008472	secisbp2	91	53.821	ENSHCOG00000008010	secisbp2	83	52.879	Hippocampus_comes
ENSSMAG00000008472	secisbp2	98	53.363	ENSIPUG00000015393	secisbp2	85	52.286	Ictalurus_punctatus
ENSSMAG00000008472	secisbp2	75	49.899	ENSSTOG00000000921	SECISBP2	51	49.696	Ictidomys_tridecemlineatus
ENSSMAG00000008472	secisbp2	84	40.720	ENSJJAG00000020492	Secisbp2	76	39.834	Jaculus_jaculus
ENSSMAG00000008472	secisbp2	98	61.715	ENSKMAG00000007129	secisbp2	97	58.177	Kryptolebias_marmoratus
ENSSMAG00000008472	secisbp2	100	71.235	ENSLBEG00000026023	secisbp2	98	66.173	Labrus_bergylta
ENSSMAG00000008472	secisbp2	86	39.873	ENSLACG00000012542	SECISBP2L	60	39.177	Latimeria_chalumnae
ENSSMAG00000008472	secisbp2	76	48.242	ENSLACG00000005735	SECISBP2	91	48.242	Latimeria_chalumnae
ENSSMAG00000008472	secisbp2	88	57.956	ENSLOCG00000011742	secisbp2	96	58.151	Lepisosteus_oculatus
ENSSMAG00000008472	secisbp2	76	48.824	ENSLAFG00000012998	SECISBP2	53	48.924	Loxodonta_africana
ENSSMAG00000008472	secisbp2	76	49.020	ENSMFAG00000003045	SECISBP2	58	48.627	Macaca_fascicularis
ENSSMAG00000008472	secisbp2	75	49.505	ENSMMUG00000012532	SECISBP2	57	49.109	Macaca_mulatta
ENSSMAG00000008472	secisbp2	76	48.824	ENSMNEG00000031737	SECISBP2	57	48.633	Macaca_nemestrina
ENSSMAG00000008472	secisbp2	76	49.216	ENSMLEG00000028868	SECISBP2	58	49.027	Mandrillus_leucophaeus
ENSSMAG00000008472	secisbp2	100	74.359	ENSMAMG00000006644	secisbp2	98	70.125	Mastacembelus_armatus
ENSSMAG00000008472	secisbp2	99	70.997	ENSMZEG00005013614	secisbp2	99	66.998	Maylandia_zebra
ENSSMAG00000008472	secisbp2	76	48.031	ENSMAUG00000008659	Secisbp2	54	48.031	Mesocricetus_auratus
ENSSMAG00000008472	secisbp2	76	49.606	ENSMICG00000001176	SECISBP2	57	48.915	Microcebus_murinus
ENSSMAG00000008472	secisbp2	76	47.723	ENSMOCG00000000616	Secisbp2	54	47.758	Microtus_ochrogaster
ENSSMAG00000008472	secisbp2	71	65.739	ENSMMOG00000017977	secisbp2	98	65.517	Mola_mola
ENSSMAG00000008472	secisbp2	88	37.920	ENSMODG00000002516	SECISBP2L	50	39.469	Monodelphis_domestica
ENSSMAG00000008472	secisbp2	85	47.138	ENSMODG00000013365	SECISBP2	75	43.149	Monodelphis_domestica
ENSSMAG00000008472	secisbp2	99	72.659	ENSMALG00000004907	secisbp2	99	68.734	Monopterus_albus
ENSSMAG00000008472	secisbp2	62	45.433	MGP_CAROLIEiJ_G0024231	Secisbp2l	96	43.256	Mus_caroli
ENSSMAG00000008472	secisbp2	76	48.356	MGP_CAROLIEiJ_G0018518	Secisbp2	53	47.379	Mus_caroli
ENSSMAG00000008472	secisbp2	84	40.997	ENSMUSG00000035139	Secisbp2	53	47.868	Mus_musculus
ENSSMAG00000008472	secisbp2	62	45.433	ENSMUSG00000035093	Secisbp2l	96	43.023	Mus_musculus
ENSSMAG00000008472	secisbp2	62	45.199	MGP_PahariEiJ_G0025677	Secisbp2l	97	42.334	Mus_pahari
ENSSMAG00000008472	secisbp2	76	48.638	MGP_PahariEiJ_G0019584	Secisbp2	53	46.476	Mus_pahari
ENSSMAG00000008472	secisbp2	84	40.990	MGP_SPRETEiJ_G0019399	Secisbp2	53	47.409	Mus_spretus
ENSSMAG00000008472	secisbp2	62	45.433	MGP_SPRETEiJ_G0025151	Secisbp2l	96	43.256	Mus_spretus
ENSSMAG00000008472	secisbp2	77	49.507	ENSMPUG00000008495	-	83	48.425	Mustela_putorius_furo
ENSSMAG00000008472	secisbp2	85	42.740	ENSMLUG00000012348	SECISBP2	52	50.197	Myotis_lucifugus
ENSSMAG00000008472	secisbp2	76	48.413	ENSNGAG00000002364	Secisbp2	53	47.628	Nannospalax_galili
ENSSMAG00000008472	secisbp2	99	69.985	ENSNBRG00000022804	secisbp2	99	65.923	Neolamprologus_brichardi
ENSSMAG00000008472	secisbp2	76	49.805	ENSNLEG00000008739	SECISBP2	59	49.798	Nomascus_leucogenys
ENSSMAG00000008472	secisbp2	53	70.349	ENSOPRG00000007588	SECISBP2	60	70.349	Ochotona_princeps
ENSSMAG00000008472	secisbp2	76	50.495	ENSODEG00000000675	SECISBP2	53	50.493	Octodon_degus
ENSSMAG00000008472	secisbp2	83	67.336	ENSONIG00000016931	secisbp2	100	72.816	Oreochromis_niloticus
ENSSMAG00000008472	secisbp2	84	41.355	ENSOCUG00000012932	SECISBP2	76	41.470	Oryctolagus_cuniculus
ENSSMAG00000008472	secisbp2	99	60.483	ENSORLG00000000343	secisbp2	99	58.242	Oryzias_latipes
ENSSMAG00000008472	secisbp2	99	60.968	ENSORLG00020012878	secisbp2	99	59.116	Oryzias_latipes_hni
ENSSMAG00000008472	secisbp2	99	59.552	ENSORLG00015004559	secisbp2	96	56.606	Oryzias_latipes_hsok
ENSSMAG00000008472	secisbp2	99	60.583	ENSOMEG00000008595	secisbp2	94	58.069	Oryzias_melastigma
ENSSMAG00000008472	secisbp2	76	51.076	ENSOGAG00000000317	SECISBP2	52	50.392	Otolemur_garnettii
ENSSMAG00000008472	secisbp2	76	50.098	ENSOARG00000007741	SECISBP2	53	49.805	Ovis_aries
ENSSMAG00000008472	secisbp2	76	49.320	ENSPPAG00000012385	SECISBP2	59	49.798	Pan_paniscus
ENSSMAG00000008472	secisbp2	76	48.606	ENSPPRG00000023911	SECISBP2	53	48.134	Panthera_pardus
ENSSMAG00000008472	secisbp2	76	49.511	ENSPTRG00000021094	SECISBP2	59	50.000	Pan_troglodytes
ENSSMAG00000008472	secisbp2	76	49.216	ENSPANG00000024873	SECISBP2	55	50.649	Papio_anubis
ENSSMAG00000008472	secisbp2	85	40.097	ENSPKIG00000020244	SECISBP2L	50	40.391	Paramormyrops_kingsleyae
ENSSMAG00000008472	secisbp2	99	53.324	ENSPKIG00000006499	SECISBP2	80	53.672	Paramormyrops_kingsleyae
ENSSMAG00000008472	secisbp2	77	51.224	ENSPSIG00000016257	SECISBP2	86	44.215	Pelodiscus_sinensis
ENSSMAG00000008472	secisbp2	84	40.503	ENSPEMG00000020212	Secisbp2	53	47.647	Peromyscus_maniculatus_bairdii
ENSSMAG00000008472	secisbp2	87	47.579	ENSPCIG00000010304	SECISBP2	75	43.832	Phascolarctos_cinereus
ENSSMAG00000008472	secisbp2	99	64.242	ENSPFOG00000008146	secisbp2	99	60.050	Poecilia_formosa
ENSSMAG00000008472	secisbp2	68	72.197	ENSPLAG00000004505	secisbp2	99	72.197	Poecilia_latipinna
ENSSMAG00000008472	secisbp2	99	64.242	ENSPMEG00000013702	secisbp2	99	59.926	Poecilia_mexicana
ENSSMAG00000008472	secisbp2	97	64.286	ENSPREG00000008117	secisbp2	99	59.181	Poecilia_reticulata
ENSSMAG00000008472	secisbp2	76	49.315	ENSPPYG00000019359	SECISBP2	53	49.805	Pongo_abelii
ENSSMAG00000008472	secisbp2	76	49.206	ENSPCOG00000013354	SECISBP2	53	49.503	Propithecus_coquereli
ENSSMAG00000008472	secisbp2	99	70.846	ENSPNYG00000016799	secisbp2	99	66.873	Pundamilia_nyererei
ENSSMAG00000008472	secisbp2	88	57.627	ENSPNAG00000029922	secisbp2	87	51.909	Pygocentrus_nattereri
ENSSMAG00000008472	secisbp2	84	40.420	ENSRNOG00000013773	Secisbp2	54	47.732	Rattus_norvegicus
ENSSMAG00000008472	secisbp2	76	49.216	ENSRBIG00000044115	SECISBP2	53	48.824	Rhinopithecus_bieti
ENSSMAG00000008472	secisbp2	76	49.216	ENSRROG00000030742	SECISBP2	53	53.864	Rhinopithecus_roxellana
ENSSMAG00000008472	secisbp2	76	50.000	ENSSBOG00000015392	SECISBP2	56	54.567	Saimiri_boliviensis_boliviensis
ENSSMAG00000008472	secisbp2	84	47.611	ENSSHAG00000005947	SECISBP2	76	43.553	Sarcophilus_harrisii
ENSSMAG00000008472	secisbp2	90	58.158	ENSSFOG00015010409	secisbp2	90	50.506	Scleropages_formosus
ENSSMAG00000008472	secisbp2	100	82.078	ENSSDUG00000002089	secisbp2	100	77.682	Seriola_dumerili
ENSSMAG00000008472	secisbp2	100	82.078	ENSSLDG00000003510	secisbp2	100	77.928	Seriola_lalandi_dorsalis
ENSSMAG00000008472	secisbp2	83	38.308	ENSSPUG00000011486	SECISBP2L	51	38.270	Sphenodon_punctatus
ENSSMAG00000008472	secisbp2	97	43.491	ENSSPUG00000009635	SECISBP2	87	43.210	Sphenodon_punctatus
ENSSMAG00000008472	secisbp2	100	74.251	ENSSPAG00000013606	secisbp2	98	70.683	Stegastes_partitus
ENSSMAG00000008472	secisbp2	62	44.965	ENSSSCG00000004653	SECISBP2L	57	36.491	Sus_scrofa
ENSSMAG00000008472	secisbp2	76	50.598	ENSSSCG00000028033	SECISBP2	54	50.947	Sus_scrofa
ENSSMAG00000008472	secisbp2	86	47.521	ENSTGUG00000000440	SECISBP2	98	46.644	Taeniopygia_guttata
ENSSMAG00000008472	secisbp2	99	62.822	ENSTRUG00000016835	secisbp2	93	62.000	Takifugu_rubripes
ENSSMAG00000008472	secisbp2	78	65.764	ENSTNIG00000015576	secisbp2	99	65.377	Tetraodon_nigroviridis
ENSSMAG00000008472	secisbp2	76	51.581	ENSTTRG00000003339	SECISBP2	52	51.282	Tursiops_truncatus
ENSSMAG00000008472	secisbp2	76	49.116	ENSUAMG00000016243	SECISBP2	53	53.953	Ursus_americanus
ENSSMAG00000008472	secisbp2	76	49.412	ENSUMAG00000016261	SECISBP2	52	53.023	Ursus_maritimus
ENSSMAG00000008472	secisbp2	76	49.008	ENSVVUG00000022278	SECISBP2	56	48.611	Vulpes_vulpes
ENSSMAG00000008472	secisbp2	86	44.674	ENSXETG00000029955	SECISBP2	97	44.845	Xenopus_tropicalis
ENSSMAG00000008472	secisbp2	66	65.122	ENSXCOG00000009547	secisbp2	88	65.122	Xiphophorus_couchianus
ENSSMAG00000008472	secisbp2	99	63.333	ENSXMAG00000003090	secisbp2	97	60.100	Xiphophorus_maculatus