EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000008647 (Gene tree)
Gene ID: -
Gene Symbol: r3hcc1
Alias: si:dkey-191l12.1
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 10617 bases
Position: chr6:17585930-17596546
Accession: ZDB-GENE-091204-146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000014065	R3H	PF01424.22	4.2e-06	1	1
ENSSMAP00000014077	R3H	PF01424.22	4.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000014264	-	5798	-	ENSSMAP00000014077	405 (aa)	-	A0A2U9BGM3
ENSSMAT00000014251	-	6056	-	ENSSMAP00000014065	405 (aa)	-	A0A2U9BGM3

Gene Model

Click here to download ENSSMAG00000008647's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008647's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008647	r3hcc1	98	31.787	ENSG00000104679	R3HCC1	91	31.678	Homo_sapiens
ENSSMAG00000008647	r3hcc1	99	63.366	ENSAPOG00000003616	r3hcc1	89	63.366	Acanthochromis_polyacanthus
ENSSMAG00000008647	r3hcc1	98	31.981	ENSAMEG00000002963	R3HCC1	84	32.220	Ailuropoda_melanoleuca
ENSSMAG00000008647	r3hcc1	100	57.541	ENSACIG00000017144	r3hcc1	95	57.541	Amphilophus_citrinellus
ENSSMAG00000008647	r3hcc1	99	65.347	ENSAOCG00000003945	r3hcc1	96	65.347	Amphiprion_ocellaris
ENSSMAG00000008647	r3hcc1	99	65.099	ENSAPEG00000003613	r3hcc1	96	65.099	Amphiprion_percula
ENSSMAG00000008647	r3hcc1	97	74.809	ENSATEG00000023860	r3hcc1	100	74.817	Anabas_testudineus
ENSSMAG00000008647	r3hcc1	98	34.286	ENSACAG00000016627	R3HCC1	90	34.524	Anolis_carolinensis
ENSSMAG00000008647	r3hcc1	99	30.266	ENSANAG00000036169	R3HCC1	91	30.508	Aotus_nancymaae
ENSSMAG00000008647	r3hcc1	98	30.733	ENSBTAG00000025830	R3HCC1	88	30.947	Bos_taurus
ENSSMAG00000008647	r3hcc1	98	31.106	ENSCJAG00000020118	R3HCC1	90	31.296	Callithrix_jacchus
ENSSMAG00000008647	r3hcc1	98	31.175	ENSCAFG00000009210	R3HCC1	87	31.655	Canis_familiaris
ENSSMAG00000008647	r3hcc1	98	32.326	ENSCHIG00000009107	R3HCC1	91	35.116	Capra_hircus
ENSSMAG00000008647	r3hcc1	98	30.820	ENSCPOG00000009696	R3HCC1	93	30.482	Cavia_porcellus
ENSSMAG00000008647	r3hcc1	59	44.231	ENSCATG00000032971	R3HCC1	90	33.168	Cercocebus_atys
ENSSMAG00000008647	r3hcc1	99	32.933	ENSCLAG00000015556	R3HCC1	78	32.697	Chinchilla_lanigera
ENSSMAG00000008647	r3hcc1	98	31.507	ENSCHOG00000000396	R3HCC1	88	33.032	Choloepus_hoffmanni
ENSSMAG00000008647	r3hcc1	98	31.442	ENSCANG00000029441	R3HCC1	90	31.204	Colobus_angolensis_palliatus
ENSSMAG00000008647	r3hcc1	68	45.570	ENSCGRG00001014977	R3hcc1	92	32.143	Cricetulus_griseus_chok1gshd
ENSSMAG00000008647	r3hcc1	68	45.570	ENSCGRG00000004454	R3hcc1	92	32.143	Cricetulus_griseus_crigri
ENSSMAG00000008647	r3hcc1	100	65.602	ENSCSEG00000005748	r3hcc1	96	65.602	Cynoglossus_semilaevis
ENSSMAG00000008647	r3hcc1	86	51.831	ENSCVAG00000002640	r3hcc1	92	51.831	Cyprinodon_variegatus
ENSSMAG00000008647	r3hcc1	99	41.728	ENSDARG00000099593	r3hcc1	93	41.728	Danio_rerio
ENSSMAG00000008647	r3hcc1	98	31.616	ENSDNOG00000007168	R3HCC1	84	31.616	Dasypus_novemcinctus
ENSSMAG00000008647	r3hcc1	99	30.687	ENSDORG00000026365	R3hcc1	93	30.388	Dipodomys_ordii
ENSSMAG00000008647	r3hcc1	99	30.425	ENSEASG00005018782	R3HCC1	74	31.529	Equus_asinus_asinus
ENSSMAG00000008647	r3hcc1	99	30.805	ENSECAG00000025013	R3HCC1	90	30.324	Equus_caballus
ENSSMAG00000008647	r3hcc1	94	31.401	ENSEEUG00000011918	R3HCC1	85	31.401	Erinaceus_europaeus
ENSSMAG00000008647	r3hcc1	98	48.675	ENSELUG00000023650	r3hcc1	98	48.675	Esox_lucius
ENSSMAG00000008647	r3hcc1	98	32.683	ENSFCAG00000012395	R3HCC1	88	31.163	Felis_catus
ENSSMAG00000008647	r3hcc1	98	31.935	ENSFDAG00000001572	R3HCC1	92	32.426	Fukomys_damarensis
ENSSMAG00000008647	r3hcc1	80	46.328	ENSGMOG00000017590	-	91	46.328	Gadus_morhua
ENSSMAG00000008647	r3hcc1	100	61.235	ENSGAFG00000008747	-	93	61.125	Gambusia_affinis
ENSSMAG00000008647	r3hcc1	98	65.075	ENSGACG00000008447	r3hcc1	90	65.075	Gasterosteus_aculeatus
ENSSMAG00000008647	r3hcc1	98	31.566	ENSGGOG00000013817	R3HCC1	91	31.731	Gorilla_gorilla
ENSSMAG00000008647	r3hcc1	75	66.234	ENSHBUG00000022250	-	93	66.234	Haplochromis_burtoni
ENSSMAG00000008647	r3hcc1	98	31.971	ENSHGLG00000010517	R3HCC1	84	33.571	Heterocephalus_glaber_female
ENSSMAG00000008647	r3hcc1	98	31.719	ENSHGLG00100006388	R3HCC1	84	33.571	Heterocephalus_glaber_male
ENSSMAG00000008647	r3hcc1	98	54.156	ENSHCOG00000011745	r3hcc1	87	55.583	Hippocampus_comes
ENSSMAG00000008647	r3hcc1	99	47.317	ENSIPUG00000024504	r3hcc1	82	47.689	Ictalurus_punctatus
ENSSMAG00000008647	r3hcc1	84	48.052	ENSSTOG00000027130	R3HCC1	75	48.684	Ictidomys_tridecemlineatus
ENSSMAG00000008647	r3hcc1	98	32.265	ENSJJAG00000013075	R3hcc1	92	32.045	Jaculus_jaculus
ENSSMAG00000008647	r3hcc1	100	61.235	ENSKMAG00000000286	r3hcc1	100	61.235	Kryptolebias_marmoratus
ENSSMAG00000008647	r3hcc1	99	34.588	ENSLACG00000011894	R3HCC1	92	34.588	Latimeria_chalumnae
ENSSMAG00000008647	r3hcc1	99	45.343	ENSLOCG00000015442	r3hcc1	96	43.672	Lepisosteus_oculatus
ENSSMAG00000008647	r3hcc1	58	42.667	ENSMFAG00000032894	R3HCC1	90	31.266	Macaca_fascicularis
ENSSMAG00000008647	r3hcc1	52	46.667	ENSMMUG00000016655	R3HCC1	90	31.373	Macaca_mulatta
ENSSMAG00000008647	r3hcc1	98	30.575	ENSMNEG00000043283	R3HCC1	90	32.170	Macaca_nemestrina
ENSSMAG00000008647	r3hcc1	98	31.808	ENSMLEG00000030147	R3HCC1	90	33.582	Mandrillus_leucophaeus
ENSSMAG00000008647	r3hcc1	100	70.617	ENSMAMG00000018146	r3hcc1	100	70.617	Mastacembelus_armatus
ENSSMAG00000008647	r3hcc1	98	33.255	ENSMGAG00000001356	R3HCC1	84	33.255	Meleagris_gallopavo
ENSSMAG00000008647	r3hcc1	98	32.536	ENSMICG00000011146	R3HCC1	90	32.346	Microcebus_murinus
ENSSMAG00000008647	r3hcc1	65	45.578	ENSMOCG00000018508	R3hcc1	58	44.937	Microtus_ochrogaster
ENSSMAG00000008647	r3hcc1	100	66.667	ENSMALG00000000731	r3hcc1	100	66.667	Monopterus_albus
ENSSMAG00000008647	r3hcc1	98	31.002	ENSMLUG00000000266	R3HCC1	84	30.930	Myotis_lucifugus
ENSSMAG00000008647	r3hcc1	83	85.185	ENSNBRG00000016975	-	76	85.185	Neolamprologus_brichardi
ENSSMAG00000008647	r3hcc1	99	34.058	ENSMEUG00000010587	R3HCC1	91	34.856	Notamacropus_eugenii
ENSSMAG00000008647	r3hcc1	99	30.482	ENSODEG00000007529	R3HCC1	93	32.037	Octodon_degus
ENSSMAG00000008647	r3hcc1	98	32.099	ENSOANG00000013877	R3HCC1	89	32.930	Ornithorhynchus_anatinus
ENSSMAG00000008647	r3hcc1	99	32.203	ENSOCUG00000023554	R3HCC1	79	33.090	Oryctolagus_cuniculus
ENSSMAG00000008647	r3hcc1	100	51.970	ENSORLG00000016816	r3hcc1	100	53.071	Oryzias_latipes
ENSSMAG00000008647	r3hcc1	100	52.217	ENSORLG00020012005	r3hcc1	100	52.463	Oryzias_latipes_hni
ENSSMAG00000008647	r3hcc1	100	51.970	ENSORLG00015007018	r3hcc1	100	52.956	Oryzias_latipes_hsok
ENSSMAG00000008647	r3hcc1	100	52.709	ENSOMEG00000000816	r3hcc1	100	52.709	Oryzias_melastigma
ENSSMAG00000008647	r3hcc1	70	44.667	ENSOGAG00000001291	R3HCC1	84	31.415	Otolemur_garnettii
ENSSMAG00000008647	r3hcc1	98	30.682	ENSOARG00000010146	R3HCC1	89	31.448	Ovis_aries
ENSSMAG00000008647	r3hcc1	98	32.102	ENSPPAG00000033165	R3HCC1	91	32.458	Pan_paniscus
ENSSMAG00000008647	r3hcc1	99	32.426	ENSPPRG00000002522	R3HCC1	92	33.086	Panthera_pardus
ENSSMAG00000008647	r3hcc1	95	33.077	ENSPTIG00000011230	R3HCC1	92	31.731	Panthera_tigris_altaica
ENSSMAG00000008647	r3hcc1	98	31.043	ENSPTRG00000020076	R3HCC1	91	31.884	Pan_troglodytes
ENSSMAG00000008647	r3hcc1	59	44.231	ENSPANG00000000453	R3HCC1	90	31.514	Papio_anubis
ENSSMAG00000008647	r3hcc1	96	48.232	ENSPKIG00000020397	-	95	48.232	Paramormyrops_kingsleyae
ENSSMAG00000008647	r3hcc1	96	46.939	ENSPKIG00000014426	-	95	46.939	Paramormyrops_kingsleyae
ENSSMAG00000008647	r3hcc1	98	35.629	ENSPSIG00000017664	R3HCC1	90	35.867	Pelodiscus_sinensis
ENSSMAG00000008647	r3hcc1	52	57.616	ENSPMGG00000007792	r3hcc1	94	36.597	Periophthalmus_magnuspinnatus
ENSSMAG00000008647	r3hcc1	68	47.183	ENSPEMG00000007118	R3hcc1	58	47.183	Peromyscus_maniculatus_bairdii
ENSSMAG00000008647	r3hcc1	95	33.577	ENSPCIG00000022718	-	82	33.496	Phascolarctos_cinereus
ENSSMAG00000008647	r3hcc1	100	61.235	ENSPFOG00000022301	r3hcc1	87	61.235	Poecilia_formosa
ENSSMAG00000008647	r3hcc1	100	61.481	ENSPLAG00000010794	r3hcc1	87	61.481	Poecilia_latipinna
ENSSMAG00000008647	r3hcc1	100	61.235	ENSPMEG00000022515	r3hcc1	87	61.235	Poecilia_mexicana
ENSSMAG00000008647	r3hcc1	100	61.330	ENSPREG00000000713	r3hcc1	87	61.330	Poecilia_reticulata
ENSSMAG00000008647	r3hcc1	94	30.233	ENSPPYG00000018436	R3HCC1	96	32.850	Pongo_abelii
ENSSMAG00000008647	r3hcc1	62	46.970	ENSPCAG00000012229	R3HCC1	56	46.970	Procavia_capensis
ENSSMAG00000008647	r3hcc1	98	31.504	ENSPCOG00000027554	R3HCC1	91	31.504	Propithecus_coquereli
ENSSMAG00000008647	r3hcc1	99	33.254	ENSPVAG00000009829	R3HCC1	89	33.254	Pteropus_vampyrus
ENSSMAG00000008647	r3hcc1	96	46.154	ENSPNAG00000023875	r3hcc1	94	48.346	Pygocentrus_nattereri
ENSSMAG00000008647	r3hcc1	72	45.625	ENSRNOG00000016777	AABR07018321.1	75	31.209	Rattus_norvegicus
ENSSMAG00000008647	r3hcc1	53	46.667	ENSRBIG00000028045	R3HCC1	90	32.426	Rhinopithecus_bieti
ENSSMAG00000008647	r3hcc1	53	46.667	ENSRROG00000031126	R3HCC1	90	32.426	Rhinopithecus_roxellana
ENSSMAG00000008647	r3hcc1	98	31.415	ENSSBOG00000022590	R3HCC1	91	31.415	Saimiri_boliviensis_boliviensis
ENSSMAG00000008647	r3hcc1	98	30.735	ENSSHAG00000016526	-	92	30.787	Sarcophilus_harrisii
ENSSMAG00000008647	r3hcc1	99	47.654	ENSSFOG00015013507	r3hcc1	100	47.654	Scleropages_formosus
ENSSMAG00000008647	r3hcc1	100	82.469	ENSSDUG00000022786	r3hcc1	94	82.469	Seriola_dumerili
ENSSMAG00000008647	r3hcc1	100	81.235	ENSSLDG00000019031	r3hcc1	94	81.235	Seriola_lalandi_dorsalis
ENSSMAG00000008647	r3hcc1	99	67.079	ENSSPAG00000013497	r3hcc1	96	67.079	Stegastes_partitus
ENSSMAG00000008647	r3hcc1	98	31.935	ENSSSCG00000039915	-	89	33.493	Sus_scrofa
ENSSMAG00000008647	r3hcc1	100	53.415	ENSTRUG00000015880	r3hcc1	95	53.415	Takifugu_rubripes
ENSSMAG00000008647	r3hcc1	98	31.905	ENSUAMG00000007344	R3HCC1	91	31.905	Ursus_americanus
ENSSMAG00000008647	r3hcc1	98	31.250	ENSVVUG00000005056	R3HCC1	87	32.134	Vulpes_vulpes
ENSSMAG00000008647	r3hcc1	96	58.462	ENSXCOG00000017626	r3hcc1	85	59.079	Xiphophorus_couchianus
ENSSMAG00000008647	r3hcc1	100	61.728	ENSXMAG00000018375	r3hcc1	93	62.500	Xiphophorus_maculatus