EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000008765 (Gene tree)
Gene ID: -
Gene Symbol: snrpd1
Alias: CHUNP6882|fk26a01|wu:fk26a01|zgc:86929
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4169 bases
Position: chr22:8802061-8806229
Accession: ZDB-GENE-020419-14
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000014281	LSM	PF01423.22	1.7e-18	1	1
ENSSMAP00000014271	LSM	PF01423.22	3.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000014462	-	1862	-	ENSSMAP00000014271	112 (aa)	-	-
ENSSMAT00000014471	-	1251	-	ENSSMAP00000014281	119 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000008765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000008765	snrpd1	89	30.769	ENSSMAG00000019307	snrpd3l	65	31.325

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008765	snrpd1	94	95.536	ENSG00000167088	SNRPD1	94	95.536	Homo_sapiens
ENSSMAG00000008765	snrpd1	100	99.160	ENSAPOG00000019446	snrpd1	65	99.160	Acanthochromis_polyacanthus
ENSSMAG00000008765	snrpd1	94	95.238	ENSAMEG00000002576	SNRPD1	94	93.636	Ailuropoda_melanoleuca
ENSSMAG00000008765	snrpd1	100	99.107	ENSACIG00000011263	snrpd1	100	99.107	Amphilophus_citrinellus
ENSSMAG00000008765	snrpd1	100	99.160	ENSAOCG00000007406	snrpd1	100	99.160	Amphiprion_ocellaris
ENSSMAG00000008765	snrpd1	100	94.958	ENSAPEG00000014961	snrpd1	100	94.958	Amphiprion_percula
ENSSMAG00000008765	snrpd1	100	99.107	ENSAPEG00000012539	SNRPD1	100	99.107	Amphiprion_percula
ENSSMAG00000008765	snrpd1	100	99.160	ENSATEG00000014399	snrpd1	100	99.160	Anabas_testudineus
ENSSMAG00000008765	snrpd1	94	95.238	ENSAPLG00000012256	SNRPD1	91	95.370	Anas_platyrhynchos
ENSSMAG00000008765	snrpd1	94	95.536	ENSACAG00000006364	SNRPD1	94	95.536	Anolis_carolinensis
ENSSMAG00000008765	snrpd1	94	95.536	ENSANAG00000025641	SNRPD1	94	95.536	Aotus_nancymaae
ENSSMAG00000008765	snrpd1	100	99.107	ENSACLG00000017406	snrpd1	100	99.107	Astatotilapia_calliptera
ENSSMAG00000008765	snrpd1	100	98.319	ENSAMXG00000004589	snrpd1	100	98.319	Astyanax_mexicanus
ENSSMAG00000008765	snrpd1	79	91.011	ENSBTAG00000055316	-	81	89.362	Bos_taurus
ENSSMAG00000008765	snrpd1	94	95.536	ENSBTAG00000008292	SNRPD1	94	95.536	Bos_taurus
ENSSMAG00000008765	snrpd1	94	92.381	ENSBTAG00000047266	-	94	91.964	Bos_taurus
ENSSMAG00000008765	snrpd1	81	92.708	ENSBTAG00000012376	-	72	92.708	Bos_taurus
ENSSMAG00000008765	snrpd1	72	79.070	WBGene00004916	snr-3	76	73.958	Caenorhabditis_elegans
ENSSMAG00000008765	snrpd1	94	95.536	ENSCJAG00000042955	SNRPD1	94	95.536	Callithrix_jacchus
ENSSMAG00000008765	snrpd1	94	95.536	ENSCAFG00000018247	SNRPD1	94	95.536	Canis_familiaris
ENSSMAG00000008765	snrpd1	80	94.737	ENSCAFG00020015914	SNRPD1	74	94.737	Canis_lupus_dingo
ENSSMAG00000008765	snrpd1	94	95.238	ENSCHIG00000005557	SNRPD1	92	94.545	Capra_hircus
ENSSMAG00000008765	snrpd1	94	95.536	ENSTSYG00000030028	SNRPD1	94	95.536	Carlito_syrichta
ENSSMAG00000008765	snrpd1	94	95.238	ENSCAPG00000008103	SNRPD1	93	94.444	Cavia_aperea
ENSSMAG00000008765	snrpd1	94	95.536	ENSCPOG00000004679	SNRPD1	94	95.536	Cavia_porcellus
ENSSMAG00000008765	snrpd1	81	90.625	ENSCCAG00000005390	-	81	90.625	Cebus_capucinus
ENSSMAG00000008765	snrpd1	94	95.536	ENSCCAG00000032658	SNRPD1	94	95.536	Cebus_capucinus
ENSSMAG00000008765	snrpd1	94	94.643	ENSCCAG00000020611	-	94	94.643	Cebus_capucinus
ENSSMAG00000008765	snrpd1	94	92.857	ENSCCAG00000016652	-	94	92.857	Cebus_capucinus
ENSSMAG00000008765	snrpd1	94	95.536	ENSCATG00000039978	SNRPD1	94	95.536	Cercocebus_atys
ENSSMAG00000008765	snrpd1	94	95.536	ENSCLAG00000008691	SNRPD1	94	95.536	Chinchilla_lanigera
ENSSMAG00000008765	snrpd1	94	95.536	ENSCSAG00000017654	SNRPD1	94	95.536	Chlorocebus_sabaeus
ENSSMAG00000008765	snrpd1	94	95.536	ENSCPBG00000023143	SNRPD1	94	95.536	Chrysemys_picta_bellii
ENSSMAG00000008765	snrpd1	72	84.884	ENSCING00000024100	-	69	84.884	Ciona_intestinalis
ENSSMAG00000008765	snrpd1	73	83.908	ENSCSAVG00000004578	-	70	83.908	Ciona_savignyi
ENSSMAG00000008765	snrpd1	94	95.536	ENSCGRG00001021055	-	94	95.536	Cricetulus_griseus_chok1gshd
ENSSMAG00000008765	snrpd1	81	70.833	ENSCGRG00001009945	-	85	70.833	Cricetulus_griseus_chok1gshd
ENSSMAG00000008765	snrpd1	81	70.833	ENSCGRG00000006224	-	85	70.833	Cricetulus_griseus_crigri
ENSSMAG00000008765	snrpd1	94	95.536	ENSCGRG00000000490	-	94	95.536	Cricetulus_griseus_crigri
ENSSMAG00000008765	snrpd1	100	97.479	ENSCSEG00000018141	snrpd1	100	97.479	Cynoglossus_semilaevis
ENSSMAG00000008765	snrpd1	100	99.160	ENSCVAG00000000534	snrpd1	100	99.160	Cyprinodon_variegatus
ENSSMAG00000008765	snrpd1	100	98.319	ENSDARG00000011648	snrpd1	100	98.319	Danio_rerio
ENSSMAG00000008765	snrpd1	94	95.536	ENSDNOG00000040310	SNRPD1	94	95.536	Dasypus_novemcinctus
ENSSMAG00000008765	snrpd1	94	95.536	ENSDORG00000008349	Snrpd1	94	95.536	Dipodomys_ordii
ENSSMAG00000008765	snrpd1	79	80.851	FBgn0261933	SmD1	76	80.851	Drosophila_melanogaster
ENSSMAG00000008765	snrpd1	72	93.827	ENSETEG00000011689	SNRPD1	68	93.827	Echinops_telfairi
ENSSMAG00000008765	snrpd1	94	92.857	ENSEBUG00000003170	snrpd1	94	92.857	Eptatretus_burgeri
ENSSMAG00000008765	snrpd1	94	95.238	ENSEASG00005002433	SNRPD1	94	95.238	Equus_asinus_asinus
ENSSMAG00000008765	snrpd1	94	95.238	ENSECAG00000014373	SNRPD1	94	95.238	Equus_caballus
ENSSMAG00000008765	snrpd1	78	94.253	ENSEEUG00000004987	SNRPD1	100	94.382	Erinaceus_europaeus
ENSSMAG00000008765	snrpd1	93	86.486	ENSELUG00000000088	snrpd1	79	96.809	Esox_lucius
ENSSMAG00000008765	snrpd1	94	95.536	ENSFCAG00000012352	SNRPD1	94	95.536	Felis_catus
ENSSMAG00000008765	snrpd1	94	95.238	ENSFALG00000002646	SNRPD1	94	95.238	Ficedula_albicollis
ENSSMAG00000008765	snrpd1	100	98.319	ENSGMOG00000015607	snrpd1	100	98.319	Gadus_morhua
ENSSMAG00000008765	snrpd1	94	95.536	ENSGALG00000041334	SNRPD1	94	95.536	Gallus_gallus
ENSSMAG00000008765	snrpd1	100	99.160	ENSGAFG00000011171	snrpd1	100	99.160	Gambusia_affinis
ENSSMAG00000008765	snrpd1	100	98.319	ENSGACG00000005201	SNRPD1	100	98.319	Gasterosteus_aculeatus
ENSSMAG00000008765	snrpd1	94	95.536	ENSGAGG00000011197	SNRPD1	94	95.536	Gopherus_agassizii
ENSSMAG00000008765	snrpd1	81	89.583	ENSGGOG00000026706	-	80	89.583	Gorilla_gorilla
ENSSMAG00000008765	snrpd1	94	95.536	ENSGGOG00000041053	SNRPD1	94	95.536	Gorilla_gorilla
ENSSMAG00000008765	snrpd1	100	99.160	ENSHBUG00000003236	snrpd1	100	99.160	Haplochromis_burtoni
ENSSMAG00000008765	snrpd1	94	95.536	ENSHGLG00000007152	SNRPD1	94	95.536	Heterocephalus_glaber_female
ENSSMAG00000008765	snrpd1	94	95.536	ENSHGLG00100008618	SNRPD1	94	95.536	Heterocephalus_glaber_male
ENSSMAG00000008765	snrpd1	100	99.160	ENSIPUG00000003576	snrpd1	100	99.160	Ictalurus_punctatus
ENSSMAG00000008765	snrpd1	94	95.536	ENSSTOG00000000485	SNRPD1	94	95.536	Ictidomys_tridecemlineatus
ENSSMAG00000008765	snrpd1	94	95.536	ENSJJAG00000017698	Snrpd1	94	95.536	Jaculus_jaculus
ENSSMAG00000008765	snrpd1	100	99.160	ENSKMAG00000005987	snrpd1	100	99.160	Kryptolebias_marmoratus
ENSSMAG00000008765	snrpd1	100	99.160	ENSLBEG00000003327	snrpd1	100	99.160	Labrus_bergylta
ENSSMAG00000008765	snrpd1	94	95.536	ENSLACG00000001955	SNRPD1	94	95.536	Latimeria_chalumnae
ENSSMAG00000008765	snrpd1	94	95.238	ENSLOCG00000002003	snrpd1	94	94.545	Lepisosteus_oculatus
ENSSMAG00000008765	snrpd1	94	95.238	ENSLAFG00000005819	SNRPD1	94	93.694	Loxodonta_africana
ENSSMAG00000008765	snrpd1	94	95.536	ENSMFAG00000042080	SNRPD1	94	95.536	Macaca_fascicularis
ENSSMAG00000008765	snrpd1	94	95.238	ENSMMUG00000003992	SNRPD1	91	95.327	Macaca_mulatta
ENSSMAG00000008765	snrpd1	94	95.536	ENSMNEG00000041296	SNRPD1	94	95.536	Macaca_nemestrina
ENSSMAG00000008765	snrpd1	94	95.536	ENSMLEG00000028659	SNRPD1	94	95.536	Mandrillus_leucophaeus
ENSSMAG00000008765	snrpd1	100	99.160	ENSMAMG00000012971	snrpd1	100	99.160	Mastacembelus_armatus
ENSSMAG00000008765	snrpd1	100	99.160	ENSMZEG00005004685	snrpd1	100	99.160	Maylandia_zebra
ENSSMAG00000008765	snrpd1	94	95.238	ENSMGAG00000011598	SNRPD1	89	95.370	Meleagris_gallopavo
ENSSMAG00000008765	snrpd1	81	78.125	ENSMAUG00000016467	-	86	78.125	Mesocricetus_auratus
ENSSMAG00000008765	snrpd1	81	78.125	ENSMAUG00000016502	-	86	78.125	Mesocricetus_auratus
ENSSMAG00000008765	snrpd1	84	89.362	ENSMAUG00000006829	-	59	94.444	Mesocricetus_auratus
ENSSMAG00000008765	snrpd1	94	95.536	ENSMICG00000044066	SNRPD1	94	95.536	Microcebus_murinus
ENSSMAG00000008765	snrpd1	94	95.536	ENSMOCG00000017367	Snrpd1	94	95.536	Microtus_ochrogaster
ENSSMAG00000008765	snrpd1	100	99.160	ENSMMOG00000019089	snrpd1	100	99.160	Mola_mola
ENSSMAG00000008765	snrpd1	94	95.536	ENSMODG00000021487	SNRPD1	94	95.536	Monodelphis_domestica
ENSSMAG00000008765	snrpd1	100	99.160	ENSMALG00000014459	snrpd1	100	99.160	Monopterus_albus
ENSSMAG00000008765	snrpd1	94	95.536	MGP_CAROLIEiJ_G0021994	Snrpd1	94	95.536	Mus_caroli
ENSSMAG00000008765	snrpd1	94	95.536	ENSMUSG00000002477	Snrpd1	94	95.536	Mus_musculus
ENSSMAG00000008765	snrpd1	94	95.536	MGP_PahariEiJ_G0018731	Snrpd1	94	95.536	Mus_pahari
ENSSMAG00000008765	snrpd1	94	95.536	MGP_SPRETEiJ_G0022910	Snrpd1	94	95.536	Mus_spretus
ENSSMAG00000008765	snrpd1	94	94.643	ENSMPUG00000020041	-	94	94.643	Mustela_putorius_furo
ENSSMAG00000008765	snrpd1	94	95.238	ENSMPUG00000005567	-	94	93.636	Mustela_putorius_furo
ENSSMAG00000008765	snrpd1	79	94.382	ENSMLUG00000009124	SNRPD1	73	93.617	Myotis_lucifugus
ENSSMAG00000008765	snrpd1	94	95.536	ENSNGAG00000023946	Snrpd1	94	95.536	Nannospalax_galili
ENSSMAG00000008765	snrpd1	79	98.936	ENSNBRG00000012119	snrpd1	78	98.936	Neolamprologus_brichardi
ENSSMAG00000008765	snrpd1	94	92.857	ENSNLEG00000031430	SNRPD1	94	92.857	Nomascus_leucogenys
ENSSMAG00000008765	snrpd1	94	95.536	ENSODEG00000005764	SNRPD1	94	95.536	Octodon_degus
ENSSMAG00000008765	snrpd1	100	99.160	ENSONIG00000002486	snrpd1	100	99.160	Oreochromis_niloticus
ENSSMAG00000008765	snrpd1	85	85.263	ENSOANG00000004638	-	82	85.714	Ornithorhynchus_anatinus
ENSSMAG00000008765	snrpd1	94	95.238	ENSOCUG00000023761	-	94	93.636	Oryctolagus_cuniculus
ENSSMAG00000008765	snrpd1	94	94.643	ENSOCUG00000014399	-	94	94.643	Oryctolagus_cuniculus
ENSSMAG00000008765	snrpd1	100	99.107	ENSORLG00000012516	snrpd1	100	99.107	Oryzias_latipes
ENSSMAG00000008765	snrpd1	100	99.160	ENSORLG00020005743	snrpd1	100	99.160	Oryzias_latipes_hni
ENSSMAG00000008765	snrpd1	100	99.160	ENSORLG00015013402	snrpd1	100	99.160	Oryzias_latipes_hsok
ENSSMAG00000008765	snrpd1	100	99.160	ENSOMEG00000011571	snrpd1	100	99.160	Oryzias_melastigma
ENSSMAG00000008765	snrpd1	94	95.238	ENSOGAG00000007833	SNRPD1	92	93.636	Otolemur_garnettii
ENSSMAG00000008765	snrpd1	81	94.792	ENSOARG00000003413	-	72	94.792	Ovis_aries
ENSSMAG00000008765	snrpd1	94	95.536	ENSPPAG00000042593	SNRPD1	94	95.536	Pan_paniscus
ENSSMAG00000008765	snrpd1	94	70.536	ENSPPRG00000005009	-	92	70.536	Panthera_pardus
ENSSMAG00000008765	snrpd1	94	95.536	ENSPPRG00000002399	SNRPD1	94	95.536	Panthera_pardus
ENSSMAG00000008765	snrpd1	94	95.238	ENSPTIG00000013206	SNRPD1	94	95.327	Panthera_tigris_altaica
ENSSMAG00000008765	snrpd1	94	95.536	ENSPTRG00000009909	SNRPD1	94	95.536	Pan_troglodytes
ENSSMAG00000008765	snrpd1	86	91.176	ENSPTRG00000050159	-	87	91.176	Pan_troglodytes
ENSSMAG00000008765	snrpd1	94	95.536	ENSPANG00000023478	SNRPD1	94	95.536	Papio_anubis
ENSSMAG00000008765	snrpd1	100	97.479	ENSPKIG00000003985	SNRPD1	100	97.479	Paramormyrops_kingsleyae
ENSSMAG00000008765	snrpd1	100	98.214	ENSPKIG00000021610	snrpd1	100	98.214	Paramormyrops_kingsleyae
ENSSMAG00000008765	snrpd1	100	99.160	ENSPMGG00000001862	snrpd1	100	99.160	Periophthalmus_magnuspinnatus
ENSSMAG00000008765	snrpd1	94	95.536	ENSPEMG00000014773	-	94	95.536	Peromyscus_maniculatus_bairdii
ENSSMAG00000008765	snrpd1	86	82.692	ENSPMAG00000003938	-	85	82.692	Petromyzon_marinus
ENSSMAG00000008765	snrpd1	94	95.536	ENSPCIG00000020320	SNRPD1	94	95.536	Phascolarctos_cinereus
ENSSMAG00000008765	snrpd1	100	94.118	ENSPFOG00000012448	SNRPD1	100	94.118	Poecilia_formosa
ENSSMAG00000008765	snrpd1	100	94.118	ENSPLAG00000006738	snrpd1	100	94.118	Poecilia_latipinna
ENSSMAG00000008765	snrpd1	100	94.118	ENSPMEG00000021942	snrpd1	100	94.118	Poecilia_mexicana
ENSSMAG00000008765	snrpd1	100	99.160	ENSPREG00000007094	snrpd1	100	99.160	Poecilia_reticulata
ENSSMAG00000008765	snrpd1	94	95.536	ENSPPYG00000025874	SNRPD1	94	95.536	Pongo_abelii
ENSSMAG00000008765	snrpd1	94	95.536	ENSPCOG00000013327	SNRPD1	94	95.536	Propithecus_coquereli
ENSSMAG00000008765	snrpd1	94	95.536	ENSPVAG00000005511	SNRPD1	75	95.536	Pteropus_vampyrus
ENSSMAG00000008765	snrpd1	100	97.479	ENSPNAG00000017824	snrpd1	100	97.479	Pygocentrus_nattereri
ENSSMAG00000008765	snrpd1	94	95.536	ENSRNOG00000013714	Snrpd1	94	95.536	Rattus_norvegicus
ENSSMAG00000008765	snrpd1	94	95.536	ENSRBIG00000022996	SNRPD1	94	95.536	Rhinopithecus_bieti
ENSSMAG00000008765	snrpd1	94	95.536	ENSRROG00000027640	SNRPD1	94	95.536	Rhinopithecus_roxellana
ENSSMAG00000008765	snrpd1	94	95.536	ENSSBOG00000020998	SNRPD1	94	95.536	Saimiri_boliviensis_boliviensis
ENSSMAG00000008765	snrpd1	94	95.536	ENSSHAG00000011791	SNRPD1	94	95.536	Sarcophilus_harrisii
ENSSMAG00000008765	snrpd1	100	98.319	ENSSFOG00015008809	-	100	98.319	Scleropages_formosus
ENSSMAG00000008765	snrpd1	100	98.319	ENSSFOG00015022253	-	100	98.319	Scleropages_formosus
ENSSMAG00000008765	snrpd1	100	99.107	ENSSDUG00000010521	snrpd1	98	97.414	Seriola_dumerili
ENSSMAG00000008765	snrpd1	100	99.160	ENSSLDG00000011858	snrpd1	100	99.160	Seriola_lalandi_dorsalis
ENSSMAG00000008765	snrpd1	58	95.385	ENSSARG00000004271	SNRPD1	100	95.522	Sorex_araneus
ENSSMAG00000008765	snrpd1	94	95.536	ENSSPUG00000002824	SNRPD1	94	95.536	Sphenodon_punctatus
ENSSMAG00000008765	snrpd1	100	99.107	ENSSPAG00000015229	snrpd1	100	99.107	Stegastes_partitus
ENSSMAG00000008765	snrpd1	94	95.536	ENSSSCG00000003701	SNRPD1	94	95.536	Sus_scrofa
ENSSMAG00000008765	snrpd1	94	95.238	ENSTGUG00000005095	SNRPD1	91	95.370	Taeniopygia_guttata
ENSSMAG00000008765	snrpd1	100	99.107	ENSTRUG00000008977	snrpd1	100	99.107	Takifugu_rubripes
ENSSMAG00000008765	snrpd1	86	94.792	ENSTNIG00000001224	snrpd1	92	94.792	Tetraodon_nigroviridis
ENSSMAG00000008765	snrpd1	72	93.827	ENSTBEG00000013776	SNRPD1	92	93.827	Tupaia_belangeri
ENSSMAG00000008765	snrpd1	94	95.238	ENSTTRG00000002654	SNRPD1	94	95.370	Tursiops_truncatus
ENSSMAG00000008765	snrpd1	94	95.238	ENSUAMG00000013431	SNRPD1	94	94.681	Ursus_americanus
ENSSMAG00000008765	snrpd1	94	95.536	ENSUMAG00000019740	SNRPD1	94	95.536	Ursus_maritimus
ENSSMAG00000008765	snrpd1	94	95.536	ENSVPAG00000010056	SNRPD1	75	95.536	Vicugna_pacos
ENSSMAG00000008765	snrpd1	94	95.238	ENSVVUG00000004009	SNRPD1	94	95.238	Vulpes_vulpes
ENSSMAG00000008765	snrpd1	94	94.643	ENSXETG00000027354	snrpd1	94	94.643	Xenopus_tropicalis
ENSSMAG00000008765	snrpd1	100	99.160	ENSXCOG00000020108	snrpd1	100	99.160	Xiphophorus_couchianus
ENSSMAG00000008765	snrpd1	100	99.160	ENSXMAG00000003368	snrpd1	100	99.160	Xiphophorus_maculatus