EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000008790 (Gene tree)
Gene ID: -
Gene Symbol: hdlbpb
Alias: fa07b03|sb:eu532|si:dkey-38p12.2|wu:fa07b03
Full Name: high density lipoprotein binding protein b
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 17396 bases
Position: chr2:5657436-5674831
Accession: ZDB-GENE-030131-6822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	1	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	2	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	3	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	4	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	5	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	6	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	7	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	8	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	9	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	10	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	11	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	12	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	13	14
ENSSMAP00000014436	KH_1	PF00013.29	8.6e-187	14	14

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000014626	-	7552	-	ENSSMAP00000014436	1268 (aa)	-	A0A2U9B0X1

Gene Model

Click here to download ENSSMAG00000008790's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008790's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000008790	hdlbpb	100	71.528	ENSSMAG00000002382	hdlbpa	100	71.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008790	hdlbpb	100	97.319	ENSAPOG00000006904	hdlbpb	100	97.319	Acanthochromis_polyacanthus
ENSSMAG00000008790	hdlbpb	100	90.895	ENSACIG00000016154	hdlbpb	100	91.680	Amphilophus_citrinellus
ENSSMAG00000008790	hdlbpb	100	97.634	ENSAOCG00000004083	hdlbpb	100	97.634	Amphiprion_ocellaris
ENSSMAG00000008790	hdlbpb	100	97.555	ENSAPEG00000012270	hdlbpb	100	97.555	Amphiprion_percula
ENSSMAG00000008790	hdlbpb	100	96.372	ENSATEG00000019877	hdlbpb	100	96.372	Anabas_testudineus
ENSSMAG00000008790	hdlbpb	100	82.019	ENSACAG00000003606	-	100	82.019	Anolis_carolinensis
ENSSMAG00000008790	hdlbpb	100	96.845	ENSACLG00000006618	hdlbpb	100	96.845	Astatotilapia_calliptera
ENSSMAG00000008790	hdlbpb	100	78.127	ENSAMXG00000019946	hdlbpb	100	78.127	Astyanax_mexicanus
ENSSMAG00000008790	hdlbpb	100	95.347	ENSCSEG00000000955	hdlbpb	100	95.347	Cynoglossus_semilaevis
ENSSMAG00000008790	hdlbpb	100	95.505	ENSCVAG00000005345	hdlbpb	100	95.505	Cyprinodon_variegatus
ENSSMAG00000008790	hdlbpb	99	85.714	ENSDARG00000061864	hdlbpb	99	85.635	Danio_rerio
ENSSMAG00000008790	hdlbpb	92	70.342	ENSEBUG00000005304	hdlbpb	96	70.342	Eptatretus_burgeri
ENSSMAG00000008790	hdlbpb	100	78.947	ENSELUG00000019925	hdlbpb	100	78.947	Esox_lucius
ENSSMAG00000008790	hdlbpb	87	34.375	ENSFHEG00000001701	hdlbpb	100	90.300	Fundulus_heteroclitus
ENSSMAG00000008790	hdlbpb	95	87.836	ENSGMOG00000004522	hdlbpb	78	87.836	Gadus_morhua
ENSSMAG00000008790	hdlbpb	100	95.189	ENSGAFG00000005278	hdlbpb	100	95.189	Gambusia_affinis
ENSSMAG00000008790	hdlbpb	99	91.792	ENSGACG00000019361	hdlbpb	100	91.792	Gasterosteus_aculeatus
ENSSMAG00000008790	hdlbpb	100	96.688	ENSHBUG00000018434	hdlbpb	100	96.688	Haplochromis_burtoni
ENSSMAG00000008790	hdlbpb	100	85.354	ENSIPUG00000003291	HDLBP	100	85.702	Ictalurus_punctatus
ENSSMAG00000008790	hdlbpb	100	96.293	ENSKMAG00000016562	hdlbpb	100	96.293	Kryptolebias_marmoratus
ENSSMAG00000008790	hdlbpb	100	96.530	ENSLBEG00000027855	hdlbpb	100	96.530	Labrus_bergylta
ENSSMAG00000008790	hdlbpb	100	84.960	ENSLACG00000007661	hdlbpb	90	84.960	Latimeria_chalumnae
ENSSMAG00000008790	hdlbpb	100	83.215	ENSLOCG00000013909	hdlbpb	100	83.215	Lepisosteus_oculatus
ENSSMAG00000008790	hdlbpb	100	96.767	ENSMAMG00000003035	hdlbpb	100	96.767	Mastacembelus_armatus
ENSSMAG00000008790	hdlbpb	100	96.845	ENSMZEG00005021465	hdlbpb	100	96.845	Maylandia_zebra
ENSSMAG00000008790	hdlbpb	100	95.347	ENSMMOG00000012525	hdlbpb	100	95.347	Mola_mola
ENSSMAG00000008790	hdlbpb	100	94.953	ENSMALG00000008938	hdlbpb	100	94.953	Monopterus_albus
ENSSMAG00000008790	hdlbpb	100	96.845	ENSNBRG00000002236	hdlbpb	100	96.845	Neolamprologus_brichardi
ENSSMAG00000008790	hdlbpb	100	96.609	ENSONIG00000009211	hdlbpb	100	96.609	Oreochromis_niloticus
ENSSMAG00000008790	hdlbpb	100	94.479	ENSORLG00000006581	hdlbpb	100	94.479	Oryzias_latipes
ENSSMAG00000008790	hdlbpb	100	94.716	ENSORLG00020010012	hdlbpb	100	94.716	Oryzias_latipes_hni
ENSSMAG00000008790	hdlbpb	100	94.795	ENSORLG00015006863	hdlbpb	100	94.795	Oryzias_latipes_hsok
ENSSMAG00000008790	hdlbpb	100	95.032	ENSOMEG00000011131	hdlbpb	100	95.032	Oryzias_melastigma
ENSSMAG00000008790	hdlbpb	100	88.565	ENSPKIG00000005966	hdlbpb	100	88.565	Paramormyrops_kingsleyae
ENSSMAG00000008790	hdlbpb	86	93.333	ENSPMGG00000019853	hdlbpb	99	93.333	Periophthalmus_magnuspinnatus
ENSSMAG00000008790	hdlbpb	94	74.890	ENSPMAG00000002131	hdlbpb	100	74.726	Petromyzon_marinus
ENSSMAG00000008790	hdlbpb	93	64.238	ENSPMAG00000000249	-	99	64.331	Petromyzon_marinus
ENSSMAG00000008790	hdlbpb	100	94.618	ENSPFOG00000008755	hdlbpb	100	94.618	Poecilia_formosa
ENSSMAG00000008790	hdlbpb	100	95.662	ENSPLAG00000007055	hdlbpb	100	95.662	Poecilia_latipinna
ENSSMAG00000008790	hdlbpb	100	95.584	ENSPMEG00000001952	hdlbpb	100	95.584	Poecilia_mexicana
ENSSMAG00000008790	hdlbpb	100	95.584	ENSPREG00000012848	hdlbpb	100	95.584	Poecilia_reticulata
ENSSMAG00000008790	hdlbpb	100	96.609	ENSPNYG00000022467	hdlbpb	100	96.609	Pundamilia_nyererei
ENSSMAG00000008790	hdlbpb	100	87.461	ENSPNAG00000011104	hdlbpb	100	87.461	Pygocentrus_nattereri
ENSSMAG00000008790	hdlbpb	100	88.249	ENSSFOG00015023199	hdlbpb	100	88.249	Scleropages_formosus
ENSSMAG00000008790	hdlbpb	100	97.476	ENSSDUG00000020694	hdlbpb	100	97.476	Seriola_dumerili
ENSSMAG00000008790	hdlbpb	100	96.767	ENSSLDG00000020807	hdlbpb	100	96.767	Seriola_lalandi_dorsalis
ENSSMAG00000008790	hdlbpb	100	82.886	ENSSPUG00000018688	-	100	82.886	Sphenodon_punctatus
ENSSMAG00000008790	hdlbpb	100	97.397	ENSSPAG00000016969	hdlbpb	100	97.397	Stegastes_partitus
ENSSMAG00000008790	hdlbpb	98	92.795	ENSTRUG00000012888	hdlbpb	99	92.795	Takifugu_rubripes
ENSSMAG00000008790	hdlbpb	99	93.657	ENSTNIG00000002555	hdlbpb	100	93.657	Tetraodon_nigroviridis
ENSSMAG00000008790	hdlbpb	100	68.064	ENSXCOG00000001797	hdlbpb	100	68.064	Xiphophorus_couchianus
ENSSMAG00000008790	hdlbpb	100	94.795	ENSXMAG00000015633	hdlbpb	100	94.795	Xiphophorus_maculatus