EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000008889 (Gene tree)
Gene ID: -
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: PRP4 pre-mRNA processing factor 4 homolog (yeast)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 3807 bases
Position: chr16:169774-173580
Accession: ZDB-GENE-030131-5143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000014494	PRP4	PF08799.11	2.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000014684	-	1686	-	ENSSMAP00000014494	510 (aa)	-	A0A2U9CGC8

Gene Model

Click here to download ENSSMAG00000008889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000008889	prpf4	57	30.952	ENSSMAG00000003589	rack1	96	30.952
ENSSMAG00000008889	prpf4	58	30.418	ENSSMAG00000015719	wdr5	90	30.418
ENSSMAG00000008889	prpf4	58	35.404	ENSSMAG00000013505	POC1A	70	35.404
ENSSMAG00000008889	prpf4	61	30.769	ENSSMAG00000014338	tbl3	68	30.769

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008889	prpf4	99	75.595	ENSG00000136875	PRPF4	96	75.595	Homo_sapiens
ENSSMAG00000008889	prpf4	99	91.511	ENSAPOG00000014132	prpf4	99	91.511	Acanthochromis_polyacanthus
ENSSMAG00000008889	prpf4	99	75.595	ENSAMEG00000013048	PRPF4	94	75.595	Ailuropoda_melanoleuca
ENSSMAG00000008889	prpf4	100	91.765	ENSACIG00000005579	prpf4	100	91.765	Amphilophus_citrinellus
ENSSMAG00000008889	prpf4	100	91.176	ENSAOCG00000005457	prpf4	100	91.176	Amphiprion_ocellaris
ENSSMAG00000008889	prpf4	100	90.980	ENSAPEG00000000776	prpf4	100	90.980	Amphiprion_percula
ENSSMAG00000008889	prpf4	100	91.961	ENSATEG00000023013	prpf4	100	91.961	Anabas_testudineus
ENSSMAG00000008889	prpf4	99	76.529	ENSAPLG00000006534	PRPF4	94	76.529	Anas_platyrhynchos
ENSSMAG00000008889	prpf4	99	75.342	ENSACAG00000015110	PRPF4	97	75.342	Anolis_carolinensis
ENSSMAG00000008889	prpf4	99	75.595	ENSANAG00000022464	PRPF4	93	75.595	Aotus_nancymaae
ENSSMAG00000008889	prpf4	100	91.961	ENSACLG00000019031	prpf4	100	91.961	Astatotilapia_calliptera
ENSSMAG00000008889	prpf4	100	61.977	ENSAMXG00000006756	prpf4	100	73.137	Astyanax_mexicanus
ENSSMAG00000008889	prpf4	99	75.595	ENSBTAG00000004571	PRPF4	96	75.595	Bos_taurus
ENSSMAG00000008889	prpf4	93	44.375	WBGene00007972	prp-4	96	44.375	Caenorhabditis_elegans
ENSSMAG00000008889	prpf4	99	75.595	ENSCJAG00000017856	PRPF4	96	75.595	Callithrix_jacchus
ENSSMAG00000008889	prpf4	99	75.595	ENSCAFG00000003224	PRPF4	93	75.595	Canis_familiaris
ENSSMAG00000008889	prpf4	99	75.595	ENSCAFG00020022637	PRPF4	97	75.595	Canis_lupus_dingo
ENSSMAG00000008889	prpf4	99	75.595	ENSCHIG00000024648	-	96	75.595	Capra_hircus
ENSSMAG00000008889	prpf4	99	75.794	ENSTSYG00000010366	PRPF4	96	75.794	Carlito_syrichta
ENSSMAG00000008889	prpf4	90	70.277	ENSCAPG00000008935	PRPF4	92	70.277	Cavia_aperea
ENSSMAG00000008889	prpf4	99	75.198	ENSCPOG00000010747	-	96	75.198	Cavia_porcellus
ENSSMAG00000008889	prpf4	99	70.635	ENSCPOG00000014729	-	96	70.635	Cavia_porcellus
ENSSMAG00000008889	prpf4	99	75.397	ENSCCAG00000028990	PRPF4	96	75.397	Cebus_capucinus
ENSSMAG00000008889	prpf4	99	75.595	ENSCATG00000021552	PRPF4	96	75.595	Cercocebus_atys
ENSSMAG00000008889	prpf4	99	75.595	ENSCLAG00000013448	PRPF4	96	75.595	Chinchilla_lanigera
ENSSMAG00000008889	prpf4	89	75.000	ENSCHOG00000007233	PRPF4	100	75.000	Choloepus_hoffmanni
ENSSMAG00000008889	prpf4	100	75.490	ENSCPBG00000019136	PRPF4	73	75.490	Chrysemys_picta_bellii
ENSSMAG00000008889	prpf4	97	60.120	ENSCING00000001299	-	95	60.120	Ciona_intestinalis
ENSSMAG00000008889	prpf4	99	57.760	ENSCSAVG00000009178	-	99	59.140	Ciona_savignyi
ENSSMAG00000008889	prpf4	99	75.595	ENSCANG00000003246	PRPF4	96	75.595	Colobus_angolensis_palliatus
ENSSMAG00000008889	prpf4	99	75.397	ENSCGRG00001016992	Prpf4	96	75.397	Cricetulus_griseus_chok1gshd
ENSSMAG00000008889	prpf4	99	75.397	ENSCGRG00000017560	Prpf4	96	75.397	Cricetulus_griseus_crigri
ENSSMAG00000008889	prpf4	100	86.863	ENSCSEG00000020451	prpf4	100	86.863	Cynoglossus_semilaevis
ENSSMAG00000008889	prpf4	100	80.196	ENSDARG00000067639	prpf4	100	80.196	Danio_rerio
ENSSMAG00000008889	prpf4	99	75.397	ENSDNOG00000013203	PRPF4	96	75.397	Dasypus_novemcinctus
ENSSMAG00000008889	prpf4	99	75.992	ENSDORG00000026275	Prpf4	96	75.992	Dipodomys_ordii
ENSSMAG00000008889	prpf4	99	49.458	FBgn0036733	U4-U6-60K	99	50.272	Drosophila_melanogaster
ENSSMAG00000008889	prpf4	99	76.190	ENSETEG00000020389	PRPF4	96	76.190	Echinops_telfairi
ENSSMAG00000008889	prpf4	99	67.489	ENSEBUG00000015229	prpf4	88	68.161	Eptatretus_burgeri
ENSSMAG00000008889	prpf4	99	75.595	ENSEASG00005022678	PRPF4	96	75.595	Equus_asinus_asinus
ENSSMAG00000008889	prpf4	99	75.595	ENSECAG00000007072	PRPF4	96	75.595	Equus_caballus
ENSSMAG00000008889	prpf4	84	80.335	ENSEEUG00000007480	PRPF4	96	60.682	Erinaceus_europaeus
ENSSMAG00000008889	prpf4	100	80.392	ENSELUG00000007510	prpf4	100	80.392	Esox_lucius
ENSSMAG00000008889	prpf4	99	75.595	ENSFCAG00000005514	PRPF4	96	75.595	Felis_catus
ENSSMAG00000008889	prpf4	99	75.621	ENSFALG00000005423	PRPF4	85	75.621	Ficedula_albicollis
ENSSMAG00000008889	prpf4	99	75.595	ENSFDAG00000005839	PRPF4	96	75.595	Fukomys_damarensis
ENSSMAG00000008889	prpf4	100	90.392	ENSFHEG00000001300	prpf4	100	90.392	Fundulus_heteroclitus
ENSSMAG00000008889	prpf4	99	76.331	ENSGALG00000008857	PRPF4	94	76.331	Gallus_gallus
ENSSMAG00000008889	prpf4	85	87.234	ENSGAFG00000012164	prpf4	68	87.234	Gambusia_affinis
ENSSMAG00000008889	prpf4	100	82.031	ENSGACG00000015476	prpf4	100	81.836	Gasterosteus_aculeatus
ENSSMAG00000008889	prpf4	100	75.098	ENSGAGG00000025029	PRPF4	94	75.345	Gopherus_agassizii
ENSSMAG00000008889	prpf4	99	75.595	ENSGGOG00000006943	PRPF4	96	75.595	Gorilla_gorilla
ENSSMAG00000008889	prpf4	100	92.157	ENSHBUG00000000562	prpf4	100	92.157	Haplochromis_burtoni
ENSSMAG00000008889	prpf4	99	75.794	ENSHGLG00000015191	PRPF4	96	75.794	Heterocephalus_glaber_female
ENSSMAG00000008889	prpf4	99	60.714	ENSHGLG00000003838	-	96	60.714	Heterocephalus_glaber_female
ENSSMAG00000008889	prpf4	95	64.622	ENSHGLG00000016628	-	95	65.031	Heterocephalus_glaber_female
ENSSMAG00000008889	prpf4	99	60.714	ENSHGLG00100005571	-	96	60.714	Heterocephalus_glaber_male
ENSSMAG00000008889	prpf4	100	79.216	ENSIPUG00000017956	PRPF4	100	79.216	Ictalurus_punctatus
ENSSMAG00000008889	prpf4	99	75.595	ENSSTOG00000027833	PRPF4	96	75.595	Ictidomys_tridecemlineatus
ENSSMAG00000008889	prpf4	99	75.595	ENSJJAG00000008838	Prpf4	96	75.595	Jaculus_jaculus
ENSSMAG00000008889	prpf4	100	89.608	ENSKMAG00000013236	prpf4	100	89.608	Kryptolebias_marmoratus
ENSSMAG00000008889	prpf4	100	92.745	ENSLBEG00000020611	prpf4	100	92.745	Labrus_bergylta
ENSSMAG00000008889	prpf4	100	71.680	ENSLACG00000016317	PRPF4	97	71.680	Latimeria_chalumnae
ENSSMAG00000008889	prpf4	100	80.196	ENSLOCG00000000581	prpf4	100	80.392	Lepisosteus_oculatus
ENSSMAG00000008889	prpf4	99	75.595	ENSLAFG00000018225	PRPF4	96	75.595	Loxodonta_africana
ENSSMAG00000008889	prpf4	99	75.397	ENSMFAG00000039397	PRPF4	96	75.397	Macaca_fascicularis
ENSSMAG00000008889	prpf4	99	75.595	ENSMMUG00000005844	PRPF4	96	75.595	Macaca_mulatta
ENSSMAG00000008889	prpf4	99	67.063	ENSMNEG00000033737	PRPF4	96	67.063	Macaca_nemestrina
ENSSMAG00000008889	prpf4	99	75.595	ENSMLEG00000040284	PRPF4	96	75.595	Mandrillus_leucophaeus
ENSSMAG00000008889	prpf4	100	92.157	ENSMAMG00000020141	prpf4	100	92.157	Mastacembelus_armatus
ENSSMAG00000008889	prpf4	100	91.961	ENSMZEG00005023205	prpf4	100	91.961	Maylandia_zebra
ENSSMAG00000008889	prpf4	99	75.740	ENSMGAG00000001796	PRPF4	94	75.740	Meleagris_gallopavo
ENSSMAG00000008889	prpf4	99	75.397	ENSMAUG00000018022	Prpf4	96	75.397	Mesocricetus_auratus
ENSSMAG00000008889	prpf4	99	75.049	ENSMICG00000015022	PRPF4	97	75.049	Microcebus_murinus
ENSSMAG00000008889	prpf4	99	75.397	ENSMOCG00000018273	Prpf4	96	75.397	Microtus_ochrogaster
ENSSMAG00000008889	prpf4	100	89.608	ENSMMOG00000021177	prpf4	100	89.608	Mola_mola
ENSSMAG00000008889	prpf4	99	74.263	ENSMODG00000025096	-	94	74.263	Monodelphis_domestica
ENSSMAG00000008889	prpf4	99	74.853	ENSMODG00000004444	-	97	74.853	Monodelphis_domestica
ENSSMAG00000008889	prpf4	100	92.941	ENSMALG00000013624	prpf4	100	92.941	Monopterus_albus
ENSSMAG00000008889	prpf4	99	75.397	MGP_CAROLIEiJ_G0026078	Prpf4	96	75.397	Mus_caroli
ENSSMAG00000008889	prpf4	99	75.397	ENSMUSG00000066148	Prpf4	96	75.397	Mus_musculus
ENSSMAG00000008889	prpf4	99	75.595	MGP_PahariEiJ_G0028413	Prpf4	96	75.595	Mus_pahari
ENSSMAG00000008889	prpf4	99	75.397	MGP_SPRETEiJ_G0027042	Prpf4	96	75.397	Mus_spretus
ENSSMAG00000008889	prpf4	99	75.595	ENSMPUG00000007883	PRPF4	96	75.595	Mustela_putorius_furo
ENSSMAG00000008889	prpf4	99	75.595	ENSMLUG00000015309	-	93	75.595	Myotis_lucifugus
ENSSMAG00000008889	prpf4	99	74.603	ENSMLUG00000008626	-	94	74.603	Myotis_lucifugus
ENSSMAG00000008889	prpf4	99	70.635	ENSNGAG00000000468	Prpf4	96	70.635	Nannospalax_galili
ENSSMAG00000008889	prpf4	100	91.961	ENSNBRG00000007972	prpf4	100	91.961	Neolamprologus_brichardi
ENSSMAG00000008889	prpf4	99	75.595	ENSNLEG00000016647	PRPF4	96	75.595	Nomascus_leucogenys
ENSSMAG00000008889	prpf4	99	74.460	ENSMEUG00000013256	PRPF4	99	74.460	Notamacropus_eugenii
ENSSMAG00000008889	prpf4	99	75.794	ENSOPRG00000005302	PRPF4	96	75.794	Ochotona_princeps
ENSSMAG00000008889	prpf4	99	75.595	ENSODEG00000018147	PRPF4	96	75.595	Octodon_degus
ENSSMAG00000008889	prpf4	100	91.961	ENSONIG00000012671	prpf4	100	91.961	Oreochromis_niloticus
ENSSMAG00000008889	prpf4	99	75.794	ENSOCUG00000005046	PRPF4	96	75.794	Oryctolagus_cuniculus
ENSSMAG00000008889	prpf4	100	89.216	ENSORLG00000019641	prpf4	100	89.216	Oryzias_latipes
ENSSMAG00000008889	prpf4	100	89.216	ENSORLG00020019438	prpf4	100	89.216	Oryzias_latipes_hni
ENSSMAG00000008889	prpf4	100	87.647	ENSOMEG00000020941	prpf4	100	87.992	Oryzias_melastigma
ENSSMAG00000008889	prpf4	99	71.627	ENSOGAG00000007802	PRPF4	94	71.627	Otolemur_garnettii
ENSSMAG00000008889	prpf4	99	75.595	ENSOARG00000006319	PRPF4	93	75.595	Ovis_aries
ENSSMAG00000008889	prpf4	99	75.595	ENSPPAG00000041797	PRPF4	96	75.595	Pan_paniscus
ENSSMAG00000008889	prpf4	99	75.595	ENSPPRG00000014360	PRPF4	96	75.595	Panthera_pardus
ENSSMAG00000008889	prpf4	99	75.595	ENSPTIG00000009574	PRPF4	96	75.595	Panthera_tigris_altaica
ENSSMAG00000008889	prpf4	99	75.595	ENSPTRG00000021274	PRPF4	96	75.595	Pan_troglodytes
ENSSMAG00000008889	prpf4	99	75.794	ENSPANG00000025776	PRPF4	92	75.794	Papio_anubis
ENSSMAG00000008889	prpf4	100	80.980	ENSPKIG00000017259	prpf4	100	80.980	Paramormyrops_kingsleyae
ENSSMAG00000008889	prpf4	99	75.148	ENSPSIG00000010713	PRPF4	89	75.148	Pelodiscus_sinensis
ENSSMAG00000008889	prpf4	100	62.639	ENSPMGG00000000997	prpf4	98	63.941	Periophthalmus_magnuspinnatus
ENSSMAG00000008889	prpf4	99	75.397	ENSPEMG00000024115	Prpf4	96	75.397	Peromyscus_maniculatus_bairdii
ENSSMAG00000008889	prpf4	99	74.656	ENSPCIG00000003821	PRPF4	98	74.656	Phascolarctos_cinereus
ENSSMAG00000008889	prpf4	100	82.879	ENSPFOG00000013524	prpf4	99	86.930	Poecilia_formosa
ENSSMAG00000008889	prpf4	84	85.538	ENSPLAG00000011620	prpf4	97	85.449	Poecilia_latipinna
ENSSMAG00000008889	prpf4	98	87.316	ENSPMEG00000006813	prpf4	100	87.316	Poecilia_mexicana
ENSSMAG00000008889	prpf4	99	75.595	ENSPCAG00000002561	PRPF4	98	75.595	Procavia_capensis
ENSSMAG00000008889	prpf4	99	75.397	ENSPCOG00000011975	PRPF4	96	75.397	Propithecus_coquereli
ENSSMAG00000008889	prpf4	99	72.619	ENSPVAG00000004708	PRPF4	96	72.619	Pteropus_vampyrus
ENSSMAG00000008889	prpf4	100	92.157	ENSPNYG00000008013	prpf4	100	92.157	Pundamilia_nyererei
ENSSMAG00000008889	prpf4	100	79.608	ENSPNAG00000000697	prpf4	100	79.608	Pygocentrus_nattereri
ENSSMAG00000008889	prpf4	99	75.397	ENSRNOG00000014777	Prpf4	96	75.397	Rattus_norvegicus
ENSSMAG00000008889	prpf4	99	75.595	ENSRBIG00000040221	PRPF4	96	75.595	Rhinopithecus_bieti
ENSSMAG00000008889	prpf4	99	75.595	ENSRROG00000040240	PRPF4	96	75.595	Rhinopithecus_roxellana
ENSSMAG00000008889	prpf4	99	74.656	ENSSHAG00000017658	PRPF4	97	74.656	Sarcophilus_harrisii
ENSSMAG00000008889	prpf4	100	80.784	ENSSFOG00015008963	prpf4	100	80.784	Scleropages_formosus
ENSSMAG00000008889	prpf4	99	92.754	ENSSDUG00000022083	prpf4	94	92.754	Seriola_dumerili
ENSSMAG00000008889	prpf4	99	93.375	ENSSLDG00000008115	prpf4	94	93.375	Seriola_lalandi_dorsalis
ENSSMAG00000008889	prpf4	99	75.835	ENSSPUG00000015582	PRPF4	97	75.835	Sphenodon_punctatus
ENSSMAG00000008889	prpf4	100	84.990	ENSSPAG00000011286	prpf4	100	84.990	Stegastes_partitus
ENSSMAG00000008889	prpf4	99	75.595	ENSSSCG00000024648	PRPF4	96	75.595	Sus_scrofa
ENSSMAG00000008889	prpf4	97	77.172	ENSTGUG00000002623	PRPF4	100	77.393	Taeniopygia_guttata
ENSSMAG00000008889	prpf4	100	87.255	ENSTRUG00000008853	prpf4	100	87.255	Takifugu_rubripes
ENSSMAG00000008889	prpf4	100	87.647	ENSTNIG00000013250	prpf4	100	87.647	Tetraodon_nigroviridis
ENSSMAG00000008889	prpf4	99	68.849	ENSTBEG00000000821	PRPF4	96	68.849	Tupaia_belangeri
ENSSMAG00000008889	prpf4	89	76.846	ENSTTRG00000003246	PRPF4	85	76.846	Tursiops_truncatus
ENSSMAG00000008889	prpf4	61	72.492	ENSUAMG00000018288	PRPF4	88	72.492	Ursus_americanus
ENSSMAG00000008889	prpf4	99	75.000	ENSUMAG00000019375	PRPF4	96	75.000	Ursus_maritimus
ENSSMAG00000008889	prpf4	99	75.198	ENSVPAG00000005281	PRPF4	96	75.198	Vicugna_pacos
ENSSMAG00000008889	prpf4	99	74.951	ENSVVUG00000002476	PRPF4	99	74.951	Vulpes_vulpes
ENSSMAG00000008889	prpf4	70	63.736	ENSXCOG00000006101	prpf4	93	66.990	Xiphophorus_couchianus
ENSSMAG00000008889	prpf4	91	75.699	ENSXMAG00000002750	prpf4	100	76.998	Xiphophorus_maculatus