EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000008953 (Gene tree)
Gene ID: -
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 67478 bases
Position: chr5:20921562-20989039
Accession: ZDB-GENE-030131-497
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000014825	ResIII	PF04851.15	1.7e-06	1	1
ENSSMAP00000014834	ResIII	PF04851.15	4.4e-06	1	1
ENSSMAP00000014720	ResIII	PF04851.15	5e-06	1	1
ENSSMAP00000014834	BRK	PF07533.16	2.2e-31	1	2
ENSSMAP00000014834	BRK	PF07533.16	2.2e-31	2	2
ENSSMAP00000014720	BRK	PF07533.16	3.7e-31	1	2
ENSSMAP00000014720	BRK	PF07533.16	3.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000014912	-	9557	-	ENSSMAP00000014720	3031 (aa)	-	-
ENSSMAT00000015018	-	5565	-	ENSSMAP00000014825	1854 (aa)	-	-
ENSSMAT00000015028	-	7521	-	ENSSMAP00000014834	2506 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000008953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008953's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000008953	chd9	73	76.667	ENSSMAG00000001453	-	77	59.904

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008953	chd9	99	67.768	ENSG00000177200	CHD9	97	68.306	Homo_sapiens
ENSSMAG00000008953	chd9	99	92.187	ENSAPOG00000023034	chd9	99	91.603	Acanthochromis_polyacanthus
ENSSMAG00000008953	chd9	99	62.695	ENSAMEG00000016232	CHD9	84	70.029	Ailuropoda_melanoleuca
ENSSMAG00000008953	chd9	97	85.808	ENSACIG00000004097	chd9	94	83.745	Amphilophus_citrinellus
ENSSMAG00000008953	chd9	99	92.267	ENSAOCG00000005487	chd9	97	92.943	Amphiprion_ocellaris
ENSSMAG00000008953	chd9	99	92.388	ENSAPEG00000009859	chd9	97	93.066	Amphiprion_percula
ENSSMAG00000008953	chd9	99	91.714	ENSATEG00000002748	chd9	97	87.958	Anabas_testudineus
ENSSMAG00000008953	chd9	95	70.253	ENSAPLG00000002826	CHD9	84	70.192	Anas_platyrhynchos
ENSSMAG00000008953	chd9	99	62.863	ENSACAG00000016150	CHD9	83	70.000	Anolis_carolinensis
ENSSMAG00000008953	chd9	99	62.396	ENSANAG00000015630	CHD9	92	67.832	Aotus_nancymaae
ENSSMAG00000008953	chd9	98	87.343	ENSACLG00000016899	chd9	96	85.192	Astatotilapia_calliptera
ENSSMAG00000008953	chd9	99	76.351	ENSAMXG00000005652	chd9	97	78.506	Astyanax_mexicanus
ENSSMAG00000008953	chd9	99	62.325	ENSBTAG00000002287	CHD9	85	67.940	Bos_taurus
ENSSMAG00000008953	chd9	99	62.467	ENSCJAG00000001573	CHD9	92	68.182	Callithrix_jacchus
ENSSMAG00000008953	chd9	99	62.722	ENSCAFG00000009699	CHD9	85	68.145	Canis_familiaris
ENSSMAG00000008953	chd9	99	62.722	ENSCAFG00020002879	CHD9	91	68.531	Canis_lupus_dingo
ENSSMAG00000008953	chd9	99	61.111	ENSCHIG00000021000	CHD9	83	71.629	Capra_hircus
ENSSMAG00000008953	chd9	99	62.259	ENSTSYG00000007693	CHD9	91	67.483	Carlito_syrichta
ENSSMAG00000008953	chd9	90	61.066	ENSCAPG00000011604	CHD9	59	60.993	Cavia_aperea
ENSSMAG00000008953	chd9	91	69.469	ENSCPOG00000036544	CHD9	83	65.912	Cavia_porcellus
ENSSMAG00000008953	chd9	99	62.396	ENSCCAG00000036178	CHD9	92	68.421	Cebus_capucinus
ENSSMAG00000008953	chd9	99	62.650	ENSCATG00000036753	CHD9	91	67.931	Cercocebus_atys
ENSSMAG00000008953	chd9	99	62.467	ENSCLAG00000007137	CHD9	99	76.983	Chinchilla_lanigera
ENSSMAG00000008953	chd9	99	62.644	ENSCSAG00000005311	CHD9	84	69.649	Chlorocebus_sabaeus
ENSSMAG00000008953	chd9	68	91.146	ENSCHOG00000003935	CHD9	54	91.099	Choloepus_hoffmanni
ENSSMAG00000008953	chd9	93	81.501	ENSCPBG00000012459	CHD9	83	79.161	Chrysemys_picta_bellii
ENSSMAG00000008953	chd9	99	62.650	ENSCANG00000030349	CHD9	91	68.531	Colobus_angolensis_palliatus
ENSSMAG00000008953	chd9	98	67.324	ENSCGRG00001016150	Chd9	79	68.999	Cricetulus_griseus_chok1gshd
ENSSMAG00000008953	chd9	98	67.324	ENSCGRG00000012850	Chd9	99	77.009	Cricetulus_griseus_crigri
ENSSMAG00000008953	chd9	99	87.360	ENSCSEG00000009209	chd9	96	86.238	Cynoglossus_semilaevis
ENSSMAG00000008953	chd9	96	87.933	ENSCVAG00000016195	chd9	97	80.380	Cyprinodon_variegatus
ENSSMAG00000008953	chd9	99	76.311	ENSDARG00000074498	chd9	97	77.194	Danio_rerio
ENSSMAG00000008953	chd9	92	69.804	ENSDNOG00000006045	CHD9	93	70.175	Dasypus_novemcinctus
ENSSMAG00000008953	chd9	53	81.772	ENSDORG00000008523	-	96	69.730	Dipodomys_ordii
ENSSMAG00000008953	chd9	89	77.249	ENSETEG00000009565	CHD9	76	91.270	Echinops_telfairi
ENSSMAG00000008953	chd9	91	76.992	ENSEASG00005014832	CHD9	92	79.627	Equus_asinus_asinus
ENSSMAG00000008953	chd9	99	62.669	ENSECAG00000011505	CHD9	84	69.343	Equus_caballus
ENSSMAG00000008953	chd9	81	86.087	ENSEEUG00000014515	CHD9	70	86.087	Erinaceus_europaeus
ENSSMAG00000008953	chd9	99	78.118	ENSELUG00000006031	chd9	97	79.662	Esox_lucius
ENSSMAG00000008953	chd9	95	69.581	ENSFCAG00000022534	CHD9	91	68.881	Felis_catus
ENSSMAG00000008953	chd9	96	69.567	ENSFALG00000013276	CHD9	97	68.912	Ficedula_albicollis
ENSSMAG00000008953	chd9	99	61.962	ENSFDAG00000021037	CHD9	84	69.170	Fukomys_damarensis
ENSSMAG00000008953	chd9	97	89.315	ENSFHEG00000006068	chd9	96	88.696	Fundulus_heteroclitus
ENSSMAG00000008953	chd9	80	87.051	ENSGMOG00000006040	chd9	84	86.906	Gadus_morhua
ENSSMAG00000008953	chd9	94	69.967	ENSGALG00000039178	CHD9	85	71.135	Gallus_gallus
ENSSMAG00000008953	chd9	99	88.479	ENSGAFG00000010014	chd9	96	89.517	Gambusia_affinis
ENSSMAG00000008953	chd9	96	86.639	ENSGACG00000016694	chd9	57	90.882	Gasterosteus_aculeatus
ENSSMAG00000008953	chd9	99	62.500	ENSGGOG00000014816	CHD9	92	68.182	Gorilla_gorilla
ENSSMAG00000008953	chd9	99	88.335	ENSHBUG00000023322	chd9	97	89.851	Haplochromis_burtoni
ENSSMAG00000008953	chd9	97	67.689	ENSHGLG00000014938	CHD9	96	79.667	Heterocephalus_glaber_female
ENSSMAG00000008953	chd9	96	83.926	ENSHCOG00000000937	chd9	97	84.342	Hippocampus_comes
ENSSMAG00000008953	chd9	99	76.976	ENSIPUG00000016448	chd9	96	78.098	Ictalurus_punctatus
ENSSMAG00000008953	chd9	95	68.987	ENSSTOG00000022273	CHD9	99	76.536	Ictidomys_tridecemlineatus
ENSSMAG00000008953	chd9	79	69.784	ENSJJAG00000015741	-	96	69.296	Jaculus_jaculus
ENSSMAG00000008953	chd9	96	90.496	ENSKMAG00000016784	chd9	96	90.669	Kryptolebias_marmoratus
ENSSMAG00000008953	chd9	99	90.293	ENSLBEG00000012077	chd9	96	91.498	Labrus_bergylta
ENSSMAG00000008953	chd9	95	65.902	ENSLACG00000005557	CHD9	79	66.653	Latimeria_chalumnae
ENSSMAG00000008953	chd9	98	75.621	ENSLOCG00000007225	chd9	97	75.143	Lepisosteus_oculatus
ENSSMAG00000008953	chd9	99	61.762	ENSLAFG00000015374	CHD9	84	68.854	Loxodonta_africana
ENSSMAG00000008953	chd9	93	69.205	ENSMFAG00000041354	CHD9	92	70.341	Macaca_fascicularis
ENSSMAG00000008953	chd9	99	62.650	ENSMMUG00000016310	CHD9	91	68.531	Macaca_mulatta
ENSSMAG00000008953	chd9	99	62.650	ENSMNEG00000031494	CHD9	85	71.727	Macaca_nemestrina
ENSSMAG00000008953	chd9	99	62.650	ENSMLEG00000043219	CHD9	91	68.531	Mandrillus_leucophaeus
ENSSMAG00000008953	chd9	99	91.515	ENSMAMG00000003909	chd9	97	87.322	Mastacembelus_armatus
ENSSMAG00000008953	chd9	99	90.587	ENSMZEG00005006581	chd9	97	91.584	Maylandia_zebra
ENSSMAG00000008953	chd9	95	65.374	ENSMGAG00000004642	CHD9	59	71.024	Meleagris_gallopavo
ENSSMAG00000008953	chd9	99	62.774	ENSMICG00000016679	CHD9	91	68.881	Microcebus_murinus
ENSSMAG00000008953	chd9	97	86.194	ENSMMOG00000016406	chd9	92	83.004	Mola_mola
ENSSMAG00000008953	chd9	83	74.880	ENSMODG00000013142	-	96	76.797	Monodelphis_domestica
ENSSMAG00000008953	chd9	97	88.529	ENSMALG00000013306	chd9	99	84.739	Monopterus_albus
ENSSMAG00000008953	chd9	99	62.311	MGP_CAROLIEiJ_G0031364	Chd9	84	68.976	Mus_caroli
ENSSMAG00000008953	chd9	95	68.502	ENSMUSG00000056608	Chd9	99	76.339	Mus_musculus
ENSSMAG00000008953	chd9	95	67.481	MGP_PahariEiJ_G0022964	Chd9	84	67.842	Mus_pahari
ENSSMAG00000008953	chd9	99	62.083	MGP_SPRETEiJ_G0032483	Chd9	84	68.753	Mus_spretus
ENSSMAG00000008953	chd9	99	62.747	ENSMPUG00000003285	CHD9	85	68.226	Mustela_putorius_furo
ENSSMAG00000008953	chd9	99	62.332	ENSMLUG00000004456	CHD9	84	68.439	Myotis_lucifugus
ENSSMAG00000008953	chd9	99	89.859	ENSNBRG00000009423	chd9	99	89.598	Neolamprologus_brichardi
ENSSMAG00000008953	chd9	99	62.260	ENSNLEG00000001026	CHD9	85	71.788	Nomascus_leucogenys
ENSSMAG00000008953	chd9	72	95.489	ENSMEUG00000008222	-	74	88.750	Notamacropus_eugenii
ENSSMAG00000008953	chd9	74	86.610	ENSOPRG00000011168	CHD9	70	84.916	Ochotona_princeps
ENSSMAG00000008953	chd9	95	68.536	ENSODEG00000004466	CHD9	84	69.080	Octodon_degus
ENSSMAG00000008953	chd9	97	89.413	ENSONIG00000002816	chd9	96	91.028	Oreochromis_niloticus
ENSSMAG00000008953	chd9	99	62.911	ENSOANG00000013401	CHD9	84	70.343	Ornithorhynchus_anatinus
ENSSMAG00000008953	chd9	96	68.852	ENSOCUG00000001016	CHD9	96	68.473	Oryctolagus_cuniculus
ENSSMAG00000008953	chd9	96	88.696	ENSORLG00000013810	chd9	96	86.108	Oryzias_latipes
ENSSMAG00000008953	chd9	96	83.561	ENSORLG00020020665	chd9	91	79.738	Oryzias_latipes_hni
ENSSMAG00000008953	chd9	97	88.561	ENSORLG00015019126	chd9	96	89.158	Oryzias_latipes_hsok
ENSSMAG00000008953	chd9	99	78.556	ENSOMEG00000015978	chd9	99	77.218	Oryzias_melastigma
ENSSMAG00000008953	chd9	95	69.071	ENSOGAG00000002110	CHD9	84	69.318	Otolemur_garnettii
ENSSMAG00000008953	chd9	99	62.208	ENSOARG00000017664	CHD9	85	68.269	Ovis_aries
ENSSMAG00000008953	chd9	97	67.326	ENSPPAG00000039388	-	95	69.434	Pan_paniscus
ENSSMAG00000008953	chd9	95	69.581	ENSPPRG00000004801	CHD9	91	68.531	Panthera_pardus
ENSSMAG00000008953	chd9	95	68.504	ENSPTIG00000021854	CHD9	91	60.140	Panthera_tigris_altaica
ENSSMAG00000008953	chd9	99	62.598	ENSPTRG00000008113	CHD9	92	68.182	Pan_troglodytes
ENSSMAG00000008953	chd9	99	67.529	ENSPANG00000019307	CHD9	97	68.265	Papio_anubis
ENSSMAG00000008953	chd9	97	77.134	ENSPKIG00000021876	chd9	96	78.186	Paramormyrops_kingsleyae
ENSSMAG00000008953	chd9	98	70.845	ENSPKIG00000025401	-	93	67.771	Paramormyrops_kingsleyae
ENSSMAG00000008953	chd9	99	62.592	ENSPSIG00000008099	CHD9	78	78.111	Pelodiscus_sinensis
ENSSMAG00000008953	chd9	99	62.265	ENSPCIG00000017215	CHD9	99	69.579	Phascolarctos_cinereus
ENSSMAG00000008953	chd9	99	88.678	ENSPFOG00000015839	chd9	97	83.955	Poecilia_formosa
ENSSMAG00000008953	chd9	99	88.800	ENSPLAG00000011118	chd9	96	89.930	Poecilia_latipinna
ENSSMAG00000008953	chd9	99	86.301	ENSPMEG00000015106	chd9	96	81.309	Poecilia_mexicana
ENSSMAG00000008953	chd9	97	90.132	ENSPREG00000006473	chd9	96	89.719	Poecilia_reticulata
ENSSMAG00000008953	chd9	99	62.546	ENSPPYG00000007348	CHD9	85	69.269	Pongo_abelii
ENSSMAG00000008953	chd9	90	80.416	ENSPCAG00000007564	CHD9	73	80.733	Procavia_capensis
ENSSMAG00000008953	chd9	99	60.480	ENSPCOG00000028433	CHD9	91	67.832	Propithecus_coquereli
ENSSMAG00000008953	chd9	91	71.495	ENSPVAG00000015617	CHD9	81	73.089	Pteropus_vampyrus
ENSSMAG00000008953	chd9	99	90.426	ENSPNYG00000010947	chd9	97	90.965	Pundamilia_nyererei
ENSSMAG00000008953	chd9	97	78.160	ENSPNAG00000024141	chd9	97	78.197	Pygocentrus_nattereri
ENSSMAG00000008953	chd9	99	59.688	ENSRNOG00000049302	Chd9	78	77.697	Rattus_norvegicus
ENSSMAG00000008953	chd9	97	67.984	ENSRBIG00000035553	CHD9	95	69.636	Rhinopithecus_bieti
ENSSMAG00000008953	chd9	96	68.806	ENSRROG00000033278	CHD9	96	69.649	Rhinopithecus_roxellana
ENSSMAG00000008953	chd9	97	67.958	ENSSBOG00000030240	CHD9	92	68.182	Saimiri_boliviensis_boliviensis
ENSSMAG00000008953	chd9	95	69.405	ENSSHAG00000002719	CHD9	84	69.796	Sarcophilus_harrisii
ENSSMAG00000008953	chd9	99	73.109	ENSSFOG00015001327	chd9	97	74.272	Scleropages_formosus
ENSSMAG00000008953	chd9	96	78.270	ENSSFOG00015020209	chd9	97	77.792	Scleropages_formosus
ENSSMAG00000008953	chd9	99	92.794	ENSSDUG00000006139	chd9	99	92.530	Seriola_dumerili
ENSSMAG00000008953	chd9	99	93.280	ENSSLDG00000017818	chd9	99	93.015	Seriola_lalandi_dorsalis
ENSSMAG00000008953	chd9	95	82.671	ENSSARG00000010632	CHD9	53	76.814	Sorex_araneus
ENSSMAG00000008953	chd9	99	92.794	ENSSPAG00000021649	chd9	99	92.249	Stegastes_partitus
ENSSMAG00000008953	chd9	97	67.392	ENSSSCG00000033591	CHD9	52	77.377	Sus_scrofa
ENSSMAG00000008953	chd9	99	62.833	ENSTGUG00000007476	CHD9	86	72.626	Taeniopygia_guttata
ENSSMAG00000008953	chd9	99	85.438	ENSTRUG00000009125	chd9	97	84.145	Takifugu_rubripes
ENSSMAG00000008953	chd9	77	68.192	ENSTNIG00000003825	chd9	84	99.408	Tetraodon_nigroviridis
ENSSMAG00000008953	chd9	60	94.915	ENSTBEG00000016052	-	64	94.915	Tupaia_belangeri
ENSSMAG00000008953	chd9	99	62.175	ENSTTRG00000012674	CHD9	77	70.742	Tursiops_truncatus
ENSSMAG00000008953	chd9	76	85.371	ENSUMAG00000004043	CHD9	92	85.729	Ursus_maritimus
ENSSMAG00000008953	chd9	95	79.475	ENSVPAG00000001374	CHD9	81	68.584	Vicugna_pacos
ENSSMAG00000008953	chd9	99	62.669	ENSVVUG00000019435	CHD9	85	68.104	Vulpes_vulpes
ENSSMAG00000008953	chd9	95	67.549	ENSXETG00000000349	chd9	77	75.076	Xenopus_tropicalis
ENSSMAG00000008953	chd9	96	88.898	ENSXCOG00000012997	chd9	96	89.022	Xiphophorus_couchianus
ENSSMAG00000008953	chd9	97	90.388	ENSXMAG00000016192	chd9	96	90.347	Xiphophorus_maculatus