EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000008996 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 28339 bases
Position: chr11:6733998-6762336
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000014691	RRM_5	PF13893.6	8.8e-08	1	2
ENSSMAP00000014691	RRM_5	PF13893.6	8.8e-08	2	2
ENSSMAP00000014691	RRM_1	PF00076.22	1.2e-40	1	3
ENSSMAP00000014691	RRM_1	PF00076.22	1.2e-40	2	3
ENSSMAP00000014691	RRM_1	PF00076.22	1.2e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000014881	-	12739	-	ENSSMAP00000014691	3545 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000008996's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000008996's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000008996	-	72	76.289	ENSSMAG00000000125	si:ch1073-335m2.2	99	76.289

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000008996	-	90	48.841	ENSG00000065526	SPEN	96	82.022	Homo_sapiens
ENSSMAG00000008996	-	98	79.144	ENSAPOG00000011411	si:ch1073-335m2.2	100	79.144	Acanthochromis_polyacanthus
ENSSMAG00000008996	-	100	84.237	ENSAPOG00000009853	-	100	84.237	Acanthochromis_polyacanthus
ENSSMAG00000008996	-	69	57.236	ENSAMEG00000011817	SPEN	96	80.899	Ailuropoda_melanoleuca
ENSSMAG00000008996	-	86	72.185	ENSAOCG00000008077	si:ch1073-335m2.2	99	72.185	Amphiprion_ocellaris
ENSSMAG00000008996	-	100	84.598	ENSAOCG00000014505	-	100	84.598	Amphiprion_ocellaris
ENSSMAG00000008996	-	100	84.518	ENSAPEG00000010288	-	100	84.518	Amphiprion_percula
ENSSMAG00000008996	-	97	77.604	ENSAPEG00000013515	si:ch1073-335m2.2	99	78.488	Amphiprion_percula
ENSSMAG00000008996	-	100	83.783	ENSATEG00000005627	-	100	83.867	Anabas_testudineus
ENSSMAG00000008996	-	98	78.610	ENSATEG00000007674	si:ch1073-335m2.2	100	79.459	Anabas_testudineus
ENSSMAG00000008996	-	99	46.945	ENSAPLG00000012618	SPEN	99	78.808	Anas_platyrhynchos
ENSSMAG00000008996	-	97	77.778	ENSACAG00000013761	SPEN	99	72.727	Anolis_carolinensis
ENSSMAG00000008996	-	90	47.896	ENSANAG00000034428	SPEN	86	72.674	Aotus_nancymaae
ENSSMAG00000008996	-	73	84.615	ENSACLG00000021433	si:ch1073-335m2.2	99	84.615	Astatotilapia_calliptera
ENSSMAG00000008996	-	100	80.950	ENSACLG00000016922	-	100	81.090	Astatotilapia_calliptera
ENSSMAG00000008996	-	100	55.303	ENSAMXG00000012485	spen	100	55.577	Astyanax_mexicanus
ENSSMAG00000008996	-	99	46.141	ENSBTAG00000018729	SPEN	97	80.899	Bos_taurus
ENSSMAG00000008996	-	90	48.345	ENSCJAG00000008527	SPEN	86	82.022	Callithrix_jacchus
ENSSMAG00000008996	-	86	53.156	ENSCAFG00000016132	-	91	82.022	Canis_familiaris
ENSSMAG00000008996	-	89	49.362	ENSCHIG00000025070	SPEN	98	82.022	Capra_hircus
ENSSMAG00000008996	-	80	45.493	ENSTSYG00000036016	SPEN	96	42.946	Carlito_syrichta
ENSSMAG00000008996	-	89	48.166	ENSCAPG00000013803	SPEN	97	78.808	Cavia_aperea
ENSSMAG00000008996	-	89	48.169	ENSCPOG00000014036	SPEN	96	78.667	Cavia_porcellus
ENSSMAG00000008996	-	90	42.615	ENSCCAG00000020258	SPEN	90	82.022	Cebus_capucinus
ENSSMAG00000008996	-	83	85.926	ENSCATG00000015079	SPEN	96	82.022	Cercocebus_atys
ENSSMAG00000008996	-	72	69.198	ENSCLAG00000002018	SPEN	94	78.667	Chinchilla_lanigera
ENSSMAG00000008996	-	89	49.116	ENSCSAG00000000841	SPEN	96	82.022	Chlorocebus_sabaeus
ENSSMAG00000008996	-	89	47.469	ENSCANG00000034547	SPEN	96	72.674	Colobus_angolensis_palliatus
ENSSMAG00000008996	-	88	49.208	ENSCGRG00001007725	Spen	86	82.584	Cricetulus_griseus_chok1gshd
ENSSMAG00000008996	-	88	47.463	ENSCGRG00000010581	Spen	86	79.333	Cricetulus_griseus_crigri
ENSSMAG00000008996	-	100	79.167	ENSCSEG00000003915	-	100	80.083	Cynoglossus_semilaevis
ENSSMAG00000008996	-	94	78.610	ENSCVAG00000009075	si:ch1073-335m2.2	99	78.610	Cyprinodon_variegatus
ENSSMAG00000008996	-	100	74.515	ENSCVAG00000016346	-	100	74.691	Cyprinodon_variegatus
ENSSMAG00000008996	-	98	45.762	ENSDARG00000074332	si:ch1073-335m2.2	100	46.168	Danio_rerio
ENSSMAG00000008996	-	100	53.732	ENSDARG00000074245	spen	100	91.111	Danio_rerio
ENSSMAG00000008996	-	99	46.307	ENSDNOG00000041948	SPEN	96	82.584	Dasypus_novemcinctus
ENSSMAG00000008996	-	89	47.134	ENSDORG00000023909	Spen	89	77.931	Dipodomys_ordii
ENSSMAG00000008996	-	53	63.874	ENSETEG00000016692	-	52	78.667	Echinops_telfairi
ENSSMAG00000008996	-	94	86.029	ENSEASG00005015911	SPEN	96	82.022	Equus_asinus_asinus
ENSSMAG00000008996	-	94	86.029	ENSECAG00000008833	SPEN	96	82.022	Equus_caballus
ENSSMAG00000008996	-	57	88.372	ENSEEUG00000010255	SPEN	58	88.372	Erinaceus_europaeus
ENSSMAG00000008996	-	97	80.541	ENSELUG00000007726	si:ch1073-335m2.2	99	80.978	Esox_lucius
ENSSMAG00000008996	-	54	46.200	ENSFALG00000003551	SPEN	100	45.084	Ficedula_albicollis
ENSSMAG00000008996	-	88	47.575	ENSFDAG00000010212	SPEN	88	77.931	Fukomys_damarensis
ENSSMAG00000008996	-	53	72.857	ENSFHEG00000004544	si:ch1073-335m2.2	99	72.857	Fundulus_heteroclitus
ENSSMAG00000008996	-	97	90.217	ENSGMOG00000008397	-	98	91.620	Gadus_morhua
ENSSMAG00000008996	-	100	47.484	ENSGALG00000036932	SPEN	99	82.022	Gallus_gallus
ENSSMAG00000008996	-	98	74.510	ENSGAFG00000021570	si:ch1073-335m2.2	99	79.070	Gambusia_affinis
ENSSMAG00000008996	-	100	76.020	ENSGAFG00000015819	-	88	96.067	Gambusia_affinis
ENSSMAG00000008996	-	62	80.233	ENSGACG00000001176	si:ch1073-335m2.2	69	80.233	Gasterosteus_aculeatus
ENSSMAG00000008996	-	100	77.132	ENSGACG00000005341	-	100	77.687	Gasterosteus_aculeatus
ENSSMAG00000008996	-	100	48.656	ENSGAGG00000020785	SPEN	99	82.022	Gopherus_agassizii
ENSSMAG00000008996	-	90	48.880	ENSGGOG00000012041	SPEN	96	82.022	Gorilla_gorilla
ENSSMAG00000008996	-	100	81.169	ENSHBUG00000020626	-	100	81.169	Haplochromis_burtoni
ENSSMAG00000008996	-	75	84.615	ENSHBUG00000023253	si:ch1073-335m2.2	99	84.615	Haplochromis_burtoni
ENSSMAG00000008996	-	81	56.771	ENSHGLG00000019259	SPEN	77	82.022	Heterocephalus_glaber_female
ENSSMAG00000008996	-	67	56.405	ENSHGLG00100019294	SPEN	75	77.931	Heterocephalus_glaber_male
ENSSMAG00000008996	-	94	77.536	ENSHCOG00000006004	si:ch1073-335m2.2	99	77.536	Hippocampus_comes
ENSSMAG00000008996	-	94	75.543	ENSIPUG00000018212	si:ch1073-335m2.2	99	75.543	Ictalurus_punctatus
ENSSMAG00000008996	-	100	53.313	ENSIPUG00000021668	spen	100	53.368	Ictalurus_punctatus
ENSSMAG00000008996	-	89	47.673	ENSSTOG00000021428	SPEN	97	77.931	Ictidomys_tridecemlineatus
ENSSMAG00000008996	-	90	49.066	ENSJJAG00000010882	Spen	98	82.584	Jaculus_jaculus
ENSSMAG00000008996	-	100	77.376	ENSKMAG00000003882	-	100	77.572	Kryptolebias_marmoratus
ENSSMAG00000008996	-	92	78.075	ENSKMAG00000021725	si:ch1073-335m2.2	99	78.075	Kryptolebias_marmoratus
ENSSMAG00000008996	-	84	77.781	ENSLBEG00000019129	-	100	77.748	Labrus_bergylta
ENSSMAG00000008996	-	96	82.840	ENSLBEG00000020855	si:ch1073-335m2.2	98	82.840	Labrus_bergylta
ENSSMAG00000008996	-	70	85.802	ENSLACG00000003258	SPEN	93	82.584	Latimeria_chalumnae
ENSSMAG00000008996	-	97	84.138	ENSLOCG00000007896	si:ch1073-335m2.2	97	84.138	Lepisosteus_oculatus
ENSSMAG00000008996	-	99	45.477	ENSLAFG00000004524	SPEN	97	71.676	Loxodonta_africana
ENSSMAG00000008996	-	89	49.545	ENSMFAG00000041974	SPEN	96	82.022	Macaca_fascicularis
ENSSMAG00000008996	-	89	49.545	ENSMMUG00000008026	SPEN	96	82.022	Macaca_mulatta
ENSSMAG00000008996	-	89	49.442	ENSMNEG00000042402	SPEN	96	82.022	Macaca_nemestrina
ENSSMAG00000008996	-	89	48.335	ENSMLEG00000039293	SPEN	96	70.787	Mandrillus_leucophaeus
ENSSMAG00000008996	-	97	73.430	ENSMAMG00000023870	si:ch1073-335m2.2	100	73.430	Mastacembelus_armatus
ENSSMAG00000008996	-	73	84.615	ENSMZEG00005011762	si:ch1073-335m2.2	99	84.615	Maylandia_zebra
ENSSMAG00000008996	-	89	79.440	ENSMZEG00005021491	-	99	79.440	Maylandia_zebra
ENSSMAG00000008996	-	92	48.044	ENSMAUG00000008318	Spen	94	82.022	Mesocricetus_auratus
ENSSMAG00000008996	-	81	52.160	ENSMICG00000030994	SPEN	87	81.461	Microcebus_murinus
ENSSMAG00000008996	-	92	79.459	ENSMMOG00000021742	si:ch1073-335m2.2	96	79.651	Mola_mola
ENSSMAG00000008996	-	100	45.693	ENSMODG00000003411	SPEN	99	82.022	Monodelphis_domestica
ENSSMAG00000008996	-	100	84.255	ENSMALG00000008625	-	100	84.283	Monopterus_albus
ENSSMAG00000008996	-	90	48.213	MGP_CAROLIEiJ_G0026745	Spen	97	81.461	Mus_caroli
ENSSMAG00000008996	-	81	51.843	ENSMUSG00000040761	Spen	97	82.022	Mus_musculus
ENSSMAG00000008996	-	99	44.908	MGP_PahariEiJ_G0029076	Spen	97	81.461	Mus_pahari
ENSSMAG00000008996	-	81	51.817	MGP_SPRETEiJ_G0027724	Spen	97	81.461	Mus_spretus
ENSSMAG00000008996	-	95	81.868	ENSMPUG00000016317	SPEN	96	73.636	Mustela_putorius_furo
ENSSMAG00000008996	-	93	87.097	ENSMLUG00000010144	SPEN	92	87.097	Myotis_lucifugus
ENSSMAG00000008996	-	90	64.151	ENSNGAG00000000641	Spen	99	82.022	Nannospalax_galili
ENSSMAG00000008996	-	93	84.615	ENSNBRG00000005733	si:ch1073-335m2.2	99	84.615	Neolamprologus_brichardi
ENSSMAG00000008996	-	85	78.960	ENSNBRG00000022090	-	100	78.960	Neolamprologus_brichardi
ENSSMAG00000008996	-	88	48.623	ENSNLEG00000007652	SPEN	85	78.431	Nomascus_leucogenys
ENSSMAG00000008996	-	89	83.333	ENSMEUG00000002422	SPEN	90	83.333	Notamacropus_eugenii
ENSSMAG00000008996	-	66	66.182	ENSOPRG00000015800	SPEN	81	79.333	Ochotona_princeps
ENSSMAG00000008996	-	100	43.197	ENSODEG00000016644	SPEN	95	82.022	Octodon_degus
ENSSMAG00000008996	-	100	79.327	ENSONIG00000006573	-	99	87.416	Oreochromis_niloticus
ENSSMAG00000008996	-	69	53.110	ENSOCUG00000010840	SPEN	97	62.353	Oryctolagus_cuniculus
ENSSMAG00000008996	-	87	65.728	ENSORLG00000028894	-	100	65.728	Oryzias_latipes
ENSSMAG00000008996	-	96	78.610	ENSORLG00000018414	si:ch1073-335m2.2	99	79.459	Oryzias_latipes
ENSSMAG00000008996	-	96	78.610	ENSORLG00020009351	si:ch1073-335m2.2	99	79.459	Oryzias_latipes_hni
ENSSMAG00000008996	-	87	66.184	ENSORLG00020007735	-	100	66.184	Oryzias_latipes_hni
ENSSMAG00000008996	-	95	83.333	ENSORLG00015005537	si:ch1073-335m2.2	99	78.919	Oryzias_latipes_hsok
ENSSMAG00000008996	-	100	68.372	ENSORLG00015022085	-	100	68.428	Oryzias_latipes_hsok
ENSSMAG00000008996	-	100	67.538	ENSOMEG00000007639	-	100	67.397	Oryzias_melastigma
ENSSMAG00000008996	-	97	79.459	ENSOMEG00000004509	si:ch1073-335m2.2	99	79.459	Oryzias_melastigma
ENSSMAG00000008996	-	81	52.280	ENSOGAG00000025110	SPEN	86	82.022	Otolemur_garnettii
ENSSMAG00000008996	-	99	45.140	ENSOARG00000008477	SPEN	96	73.684	Ovis_aries
ENSSMAG00000008996	-	89	48.211	ENSPPAG00000035690	SPEN	96	78.667	Pan_paniscus
ENSSMAG00000008996	-	90	48.800	ENSPTRG00000000210	SPEN	86	82.022	Pan_troglodytes
ENSSMAG00000008996	-	89	48.354	ENSPANG00000006293	SPEN	96	82.022	Papio_anubis
ENSSMAG00000008996	-	100	53.993	ENSPKIG00000002617	SPEN	90	85.635	Paramormyrops_kingsleyae
ENSSMAG00000008996	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSSMAG00000008996	-	99	46.879	ENSPSIG00000008026	SPEN	99	78.808	Pelodiscus_sinensis
ENSSMAG00000008996	-	87	70.690	ENSPEMG00000022997	Spen	97	77.241	Peromyscus_maniculatus_bairdii
ENSSMAG00000008996	-	92	78.610	ENSPFOG00000017986	si:ch1073-335m2.2	99	79.459	Poecilia_formosa
ENSSMAG00000008996	-	97	78.610	ENSPLAG00000016625	si:ch1073-335m2.2	99	79.459	Poecilia_latipinna
ENSSMAG00000008996	-	100	76.048	ENSPMEG00000006764	-	100	76.048	Poecilia_mexicana
ENSSMAG00000008996	-	92	78.610	ENSPMEG00000002674	si:ch1073-335m2.2	99	79.459	Poecilia_mexicana
ENSSMAG00000008996	-	100	76.161	ENSPREG00000010399	-	100	76.161	Poecilia_reticulata
ENSSMAG00000008996	-	97	78.610	ENSPREG00000005357	si:ch1073-335m2.2	99	79.459	Poecilia_reticulata
ENSSMAG00000008996	-	90	48.701	ENSPPYG00000001834	SPEN	96	82.022	Pongo_abelii
ENSSMAG00000008996	-	68	70.259	ENSPCAG00000009543	SPEN	86	73.469	Procavia_capensis
ENSSMAG00000008996	-	81	50.912	ENSPCOG00000021735	SPEN	96	81.461	Propithecus_coquereli
ENSSMAG00000008996	-	71	68.354	ENSPVAG00000013794	SPEN	70	81.461	Pteropus_vampyrus
ENSSMAG00000008996	-	100	81.141	ENSPNYG00000012379	-	100	81.141	Pundamilia_nyererei
ENSSMAG00000008996	-	88	84.615	ENSPNYG00000009042	si:ch1073-335m2.2	99	84.615	Pundamilia_nyererei
ENSSMAG00000008996	-	97	77.717	ENSPNAG00000011452	si:ch1073-335m2.2	99	73.980	Pygocentrus_nattereri
ENSSMAG00000008996	-	100	56.252	ENSPNAG00000020795	spen	100	56.540	Pygocentrus_nattereri
ENSSMAG00000008996	-	89	47.453	ENSRNOG00000033556	Spen	97	78.808	Rattus_norvegicus
ENSSMAG00000008996	-	89	48.412	ENSRBIG00000039654	SPEN	96	78.667	Rhinopithecus_bieti
ENSSMAG00000008996	-	88	48.606	ENSRROG00000035686	SPEN	96	78.431	Rhinopithecus_roxellana
ENSSMAG00000008996	-	88	47.891	ENSSBOG00000028770	SPEN	85	78.431	Saimiri_boliviensis_boliviensis
ENSSMAG00000008996	-	93	48.398	ENSSHAG00000004960	SPEN	98	79.890	Sarcophilus_harrisii
ENSSMAG00000008996	-	100	56.018	ENSSFOG00015010267	si:ch1073-335m2.2	100	55.820	Scleropages_formosus
ENSSMAG00000008996	-	86	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	56.086	Scleropages_formosus
ENSSMAG00000008996	-	100	88.595	ENSSDUG00000003476	-	100	88.595	Seriola_dumerili
ENSSMAG00000008996	-	95	79.144	ENSSDUG00000008416	si:ch1073-335m2.2	99	79.144	Seriola_dumerili
ENSSMAG00000008996	-	100	88.305	ENSSLDG00000012950	-	100	88.361	Seriola_lalandi_dorsalis
ENSSMAG00000008996	-	95	79.144	ENSSLDG00000023347	si:ch1073-335m2.2	99	80.000	Seriola_lalandi_dorsalis
ENSSMAG00000008996	-	87	43.709	ENSSPUG00000001866	-	100	43.894	Sphenodon_punctatus
ENSSMAG00000008996	-	97	80.108	ENSSPAG00000012454	si:ch1073-335m2.2	99	80.108	Stegastes_partitus
ENSSMAG00000008996	-	100	84.771	ENSSPAG00000006014	-	100	84.771	Stegastes_partitus
ENSSMAG00000008996	-	76	48.816	ENSSSCG00000034484	SPEN	84	82.022	Sus_scrofa
ENSSMAG00000008996	-	100	75.856	ENSTRUG00000024350	-	100	76.053	Takifugu_rubripes
ENSSMAG00000008996	-	84	78.804	ENSTRUG00000021008	si:ch1073-335m2.2	99	78.804	Takifugu_rubripes
ENSSMAG00000008996	-	97	86.133	ENSTNIG00000010907	-	100	85.569	Tetraodon_nigroviridis
ENSSMAG00000008996	-	98	67.382	ENSTNIG00000014666	si:ch1073-335m2.2	99	79.651	Tetraodon_nigroviridis
ENSSMAG00000008996	-	70	78.523	ENSTBEG00000003628	SPEN	71	78.523	Tupaia_belangeri
ENSSMAG00000008996	-	73	72.811	ENSTTRG00000015704	SPEN	69	78.667	Tursiops_truncatus
ENSSMAG00000008996	-	69	57.481	ENSUAMG00000009600	SPEN	96	82.022	Ursus_americanus
ENSSMAG00000008996	-	69	55.708	ENSUMAG00000021641	SPEN	96	76.433	Ursus_maritimus
ENSSMAG00000008996	-	88	100.000	ENSVVUG00000028951	SPEN	95	100.000	Vulpes_vulpes
ENSSMAG00000008996	-	98	77.202	ENSXCOG00000004516	si:ch1073-335m2.2	99	77.202	Xiphophorus_couchianus
ENSSMAG00000008996	-	97	78.610	ENSXMAG00000029887	si:ch1073-335m2.2	99	79.651	Xiphophorus_maculatus
ENSSMAG00000008996	-	100	75.598	ENSXMAG00000021384	-	100	75.598	Xiphophorus_maculatus