EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSMAG00000009007 (Gene tree)
Gene ID
-
Gene Symbol
pabpc4
Alias
cb12|sb:cb12
Full Name
poly(A) binding protein%2C cytoplasmic 4 (inducible form)
Gene Type
protein_coding
Species
Scophthalmus_maximus
Status
putative
Strand
Minus strand
Length
9522 bases
Position
chr17:14532714-14542235
Accession
ZDB-GENE-030131-9663
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSMAP00000014737PABPPF00658.185.7e-3111
ENSSMAP00000014737RRM_5PF13893.61.6e-0911
ENSSMAP00000014737RRM_1PF00076.223.1e-9014
ENSSMAP00000014737RRM_1PF00076.223.1e-9024
ENSSMAP00000014737RRM_1PF00076.223.1e-9034
ENSSMAP00000014737RRM_1PF00076.223.1e-9044
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSMAT00000014930-3385-ENSSMAP00000014737627 (aa)-A0A2U9CJI1
Gene Model
Click here to download ENSSMAG00000009007's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009007's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSMAG00000009007pabpc49867.416ENSSMAG00000010516pabpc1l9880.882
ENSSMAG00000009007pabpc45237.500ENSSMAG00000008925-5738.372
ENSSMAG00000009007pabpc45837.500ENSSMAG00000013827celf17037.500
ENSSMAG00000009007pabpc45933.684ENSSMAG00000020065-5833.010
ENSSMAG00000009007pabpc49975.671ENSSMAG00000006869pabpc1b9975.197
ENSSMAG00000009007pabpc46838.636ENSSMAG00000008575-9735.714
ENSSMAG00000009007pabpc45037.500ENSSMAG00000009331celf46335.616
ENSSMAG00000009007pabpc46034.940ENSSMAG00000006881elavl48434.940
ENSSMAG00000009007pabpc46536.364ENSSMAG00000015634celf3b5836.364
ENSSMAG00000009007pabpc49975.314ENSSMAG00000010803pabpc1a9974.843
ENSSMAG00000009007pabpc46036.145ENSSMAG00000010745ELAVL28536.145
ENSSMAG00000009007pabpc45931.250ENSSMAG00000021241ncl5030.508
ENSSMAG00000009007pabpc45832.895ENSSMAG00000014353-8534.615
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSMAG00000009007pabpc49984.677ENSG00000090621PABPC49996.396Homo_sapiens
ENSSMAG00000009007pabpc410096.651ENSAPOG00000001161pabpc410096.651Acanthochromis_polyacanthus
ENSSMAG00000009007pabpc49979.123ENSAMEG00000011535-9978.971Ailuropoda_melanoleuca
ENSSMAG00000009007pabpc49850.000ENSAMEG00000015083-9848.392Ailuropoda_melanoleuca
ENSSMAG00000009007pabpc410094.778ENSACIG00000023343pabpc410094.778Amphilophus_citrinellus
ENSSMAG00000009007pabpc410096.810ENSAOCG00000021529pabpc410096.810Amphiprion_ocellaris
ENSSMAG00000009007pabpc410096.810ENSAPEG00000019196pabpc410096.810Amphiprion_percula
ENSSMAG00000009007pabpc410096.656ENSATEG00000007402pabpc410096.656Anabas_testudineus
ENSSMAG00000009007pabpc49985.285ENSAPLG00000009729-9984.652Anas_platyrhynchos
ENSSMAG00000009007pabpc49885.053ENSACAG00000002544PABPC49983.630Anolis_carolinensis
ENSSMAG00000009007pabpc49982.104ENSANAG00000025079PABPC49982.437Aotus_nancymaae
ENSSMAG00000009007pabpc410095.853ENSACLG00000019558pabpc410095.853Astatotilapia_calliptera
ENSSMAG00000009007pabpc49985.215ENSAMXG00000018779pabpc49985.215Astyanax_mexicanus
ENSSMAG00000009007pabpc49981.298ENSBTAG00000017125PABPC49980.680Bos_taurus
ENSSMAG00000009007pabpc45884.431ENSBTAG00000048536-9384.431Bos_taurus
ENSSMAG00000009007pabpc47480.357ENSCJAG00000045953-8578.571Callithrix_jacchus
ENSSMAG00000009007pabpc49982.104ENSCJAG00000002512-9982.437Callithrix_jacchus
ENSSMAG00000009007pabpc49982.104ENSCAFG00000003081PABPC49982.437Canis_familiaris
ENSSMAG00000009007pabpc49979.274ENSCAFG00020004161PABPC49979.123Canis_lupus_dingo
ENSSMAG00000009007pabpc49965.156ENSCHIG00000023385-9964.688Capra_hircus
ENSSMAG00000009007pabpc49979.123ENSCHIG00000019398-9978.971Capra_hircus
ENSSMAG00000009007pabpc49983.386ENSTSYG00000006532PABPC49982.437Carlito_syrichta
ENSSMAG00000009007pabpc49882.177ENSCAPG00000015984PABPC49982.512Cavia_aperea
ENSSMAG00000009007pabpc49982.418ENSCPOG00000009552PABPC49982.753Cavia_porcellus
ENSSMAG00000009007pabpc49982.104ENSCCAG00000037306PABPC49982.437Cebus_capucinus
ENSSMAG00000009007pabpc49982.104ENSCATG00000042164PABPC49982.753Cercocebus_atys
ENSSMAG00000009007pabpc49982.261ENSCLAG00000011899PABPC49982.595Chinchilla_lanigera
ENSSMAG00000009007pabpc49980.030ENSCSAG00000001135PABPC49979.274Chlorocebus_sabaeus
ENSSMAG00000009007pabpc48588.421ENSCHOG00000005327PABPC47988.949Choloepus_hoffmanni
ENSSMAG00000009007pabpc49986.234ENSCPBG00000001038PABPC49985.601Chrysemys_picta_bellii
ENSSMAG00000009007pabpc49882.325ENSCANG00000034177PABPC49982.665Colobus_angolensis_palliatus
ENSSMAG00000009007pabpc49884.553ENSCGRG00001018166Pabpc410083.121Cricetulus_griseus_chok1gshd
ENSSMAG00000009007pabpc49784.818ENSCGRG00000009777Pabpc410083.360Cricetulus_griseus_crigri
ENSSMAG00000009007pabpc410095.694ENSCSEG00000000130pabpc410095.694Cynoglossus_semilaevis
ENSSMAG00000009007pabpc49895.603ENSCVAG00000019246pabpc49995.603Cyprinodon_variegatus
ENSSMAG00000009007pabpc49892.332ENSDARG00000059259pabpc410092.066Danio_rerio
ENSSMAG00000009007pabpc49880.919ENSDNOG00000018444-9981.283Dasypus_novemcinctus
ENSSMAG00000009007pabpc49981.327ENSDORG00000011581Pabpc49980.805Dipodomys_ordii
ENSSMAG00000009007pabpc49990.625ENSETEG00000018453-8490.625Echinops_telfairi
ENSSMAG00000009007pabpc48553.860ENSETEG00000009172-9951.899Echinops_telfairi
ENSSMAG00000009007pabpc49677.561ENSEBUG00000013782pabpc49977.070Eptatretus_burgeri
ENSSMAG00000009007pabpc49876.997ENSEBUG00000000992pabpc49976.677Eptatretus_burgeri
ENSSMAG00000009007pabpc49979.274ENSEASG00005014119PABPC49979.123Equus_asinus_asinus
ENSSMAG00000009007pabpc49979.274ENSECAG00000009396PABPC49979.123Equus_caballus
ENSSMAG00000009007pabpc49778.221ENSEEUG00000002962PABPC49977.761Erinaceus_europaeus
ENSSMAG00000009007pabpc49892.344ENSELUG00000003195pabpc410091.236Esox_lucius
ENSSMAG00000009007pabpc49982.104ENSFCAG00000015254-9982.437Felis_catus
ENSSMAG00000009007pabpc49985.150ENSFALG00000000543PABPC49985.103Ficedula_albicollis
ENSSMAG00000009007pabpc48851.168ENSFDAG00000010581-9949.063Fukomys_damarensis
ENSSMAG00000009007pabpc49979.425ENSFDAG00000020016-9979.123Fukomys_damarensis
ENSSMAG00000009007pabpc410095.694ENSFHEG00000007548pabpc410095.694Fundulus_heteroclitus
ENSSMAG00000009007pabpc410091.066ENSGMOG00000019025pabpc49991.066Gadus_morhua
ENSSMAG00000009007pabpc49986.234ENSGALG00000003800PABPC49985.443Gallus_gallus
ENSSMAG00000009007pabpc410093.968ENSGAFG00000018195pabpc49898.889Gambusia_affinis
ENSSMAG00000009007pabpc410094.577ENSGACG00000007179pabpc410094.577Gasterosteus_aculeatus
ENSSMAG00000009007pabpc49986.392ENSGAGG00000001888PABPC49985.759Gopherus_agassizii
ENSSMAG00000009007pabpc49982.104ENSGGOG00000004002PABPC49982.437Gorilla_gorilla
ENSSMAG00000009007pabpc410095.853ENSHBUG00000020206pabpc410095.853Haplochromis_burtoni
ENSSMAG00000009007pabpc49982.261ENSHGLG00000011162PABPC49982.595Heterocephalus_glaber_female
ENSSMAG00000009007pabpc49982.261ENSHGLG00100001580PABPC49982.595Heterocephalus_glaber_male
ENSSMAG00000009007pabpc410093.780ENSHCOG00000012694pabpc410094.737Hippocampus_comes
ENSSMAG00000009007pabpc49791.452ENSIPUG00000016620pabpc49990.665Ictalurus_punctatus
ENSSMAG00000009007pabpc49984.516ENSSTOG00000010416PABPC49983.871Ictidomys_tridecemlineatus
ENSSMAG00000009007pabpc49980.620ENSJJAG00000007781Pabpc49979.845Jaculus_jaculus
ENSSMAG00000009007pabpc410095.223ENSKMAG00000013597pabpc410095.223Kryptolebias_marmoratus
ENSSMAG00000009007pabpc410095.707ENSLBEG00000013654pabpc49995.707Labrus_bergylta
ENSSMAG00000009007pabpc49986.256ENSLACG00000011907PABPC49985.782Latimeria_chalumnae
ENSSMAG00000009007pabpc49990.363ENSLOCG00000001877pabpc49990.363Lepisosteus_oculatus
ENSSMAG00000009007pabpc49984.677ENSLAFG00000000151PABPC49983.897Loxodonta_africana
ENSSMAG00000009007pabpc49982.104ENSMFAG00000041481PABPC49982.753Macaca_fascicularis
ENSSMAG00000009007pabpc49980.030ENSMMUG00000007497PABPC49979.274Macaca_mulatta
ENSSMAG00000009007pabpc49982.104ENSMNEG00000043054PABPC49982.278Macaca_nemestrina
ENSSMAG00000009007pabpc49982.104ENSMLEG00000040716PABPC49982.753Mandrillus_leucophaeus
ENSSMAG00000009007pabpc410097.129ENSMAMG00000010025pabpc410097.129Mastacembelus_armatus
ENSSMAG00000009007pabpc410095.694ENSMZEG00005006141pabpc410095.694Maylandia_zebra
ENSSMAG00000009007pabpc49882.852ENSMGAG00000005408PABPC49981.664Meleagris_gallopavo
ENSSMAG00000009007pabpc45880.117ENSMAUG00000004089-9280.117Mesocricetus_auratus
ENSSMAG00000009007pabpc47278.571ENSMAUG00000001295-9777.619Mesocricetus_auratus
ENSSMAG00000009007pabpc47790.625ENSMAUG00000019763-8485.321Mesocricetus_auratus
ENSSMAG00000009007pabpc48884.296ENSMICG00000016633-10083.604Microcebus_murinus
ENSSMAG00000009007pabpc49874.275ENSMICG00000036729-9973.551Microcebus_murinus
ENSSMAG00000009007pabpc410082.962ENSMOCG00000006763Pabpc410082.484Microtus_ochrogaster
ENSSMAG00000009007pabpc410092.504ENSMMOG00000002363pabpc410092.185Mola_mola
ENSSMAG00000009007pabpc46070.667ENSMODG00000018051-9670.667Monodelphis_domestica
ENSSMAG00000009007pabpc49782.897ENSMODG00000017657-9981.915Monodelphis_domestica
ENSSMAG00000009007pabpc410096.502ENSMALG00000011017pabpc410096.502Monopterus_albus
ENSSMAG00000009007pabpc49770.224MGP_CAROLIEiJ_G0024864-9972.906Mus_caroli
ENSSMAG00000009007pabpc49978.820MGP_CAROLIEiJ_G0026435-10096.454Mus_caroli
ENSSMAG00000009007pabpc49984.194ENSMUSG00000011257Pabpc410094.643Mus_musculus
ENSSMAG00000009007pabpc49978.788MGP_PahariEiJ_G0028765Pabpc410097.163Mus_pahari
ENSSMAG00000009007pabpc49870.077MGP_SPRETEiJ_G0027415Pabpc410097.163Mus_spretus
ENSSMAG00000009007pabpc49979.274ENSMPUG00000014414-9979.123Mustela_putorius_furo
ENSSMAG00000009007pabpc49545.875ENSMPUG00000006836-10045.470Mustela_putorius_furo
ENSSMAG00000009007pabpc49984.516ENSMLUG00000012068PABPC49983.871Myotis_lucifugus
ENSSMAG00000009007pabpc49984.677ENSNGAG00000018292Pabpc49983.897Nannospalax_galili
ENSSMAG00000009007pabpc46098.558ENSNBRG00000009708pabpc49898.558Neolamprologus_brichardi
ENSSMAG00000009007pabpc46597.590ENSNBRG00000010047-7297.590Neolamprologus_brichardi
ENSSMAG00000009007pabpc49982.104ENSNLEG00000011928PABPC49982.753Nomascus_leucogenys
ENSSMAG00000009007pabpc48593.651ENSOPRG00000011984PABPC48693.651Ochotona_princeps
ENSSMAG00000009007pabpc45382.857ENSODEG00000013457-10082.857Octodon_degus
ENSSMAG00000009007pabpc49982.616ENSODEG00000006592-9982.120Octodon_degus
ENSSMAG00000009007pabpc49873.684ENSODEG00000017434-9973.263Octodon_degus
ENSSMAG00000009007pabpc410095.534ENSONIG00000008176pabpc410095.534Oreochromis_niloticus
ENSSMAG00000009007pabpc49985.918ENSOANG00000010001PABPC49985.285Ornithorhynchus_anatinus
ENSSMAG00000009007pabpc49579.435ENSOCUG00000000562PABPC48879.435Oryctolagus_cuniculus
ENSSMAG00000009007pabpc49996.296ENSORLG00000017479pabpc49996.296Oryzias_latipes
ENSSMAG00000009007pabpc49996.296ENSORLG00020018644pabpc410096.296Oryzias_latipes_hni
ENSSMAG00000009007pabpc49996.296ENSORLG00015015042pabpc410096.296Oryzias_latipes_hsok
ENSSMAG00000009007pabpc49995.793ENSOMEG00000014410pabpc49995.056Oryzias_melastigma
ENSSMAG00000009007pabpc49981.019ENSOGAG00000004067PABPC49980.740Otolemur_garnettii
ENSSMAG00000009007pabpc49979.123ENSOARG00000020060PABPC49978.971Ovis_aries
ENSSMAG00000009007pabpc49982.104ENSPPAG00000043625PABPC49982.437Pan_paniscus
ENSSMAG00000009007pabpc49982.104ENSPPRG00000024727PABPC49982.437Panthera_pardus
ENSSMAG00000009007pabpc49982.104ENSPTIG00000005829PABPC49982.437Panthera_tigris_altaica
ENSSMAG00000009007pabpc49982.104ENSPTRG00000000573PABPC49982.437Pan_troglodytes
ENSSMAG00000009007pabpc49982.104ENSPANG00000009484PABPC49982.437Papio_anubis
ENSSMAG00000009007pabpc49990.317ENSPKIG00000025356pabpc49990.317Paramormyrops_kingsleyae
ENSSMAG00000009007pabpc49986.551ENSPSIG00000016892PABPC49985.918Pelodiscus_sinensis
ENSSMAG00000009007pabpc410091.069ENSPMGG00000009073pabpc49990.271Periophthalmus_magnuspinnatus
ENSSMAG00000009007pabpc49979.407ENSPEMG00000024193-9979.343Peromyscus_maniculatus_bairdii
ENSSMAG00000009007pabpc49981.875ENSPEMG00000023569-9982.205Peromyscus_maniculatus_bairdii
ENSSMAG00000009007pabpc48875.261ENSPMAG00000002836pabpc410075.958Petromyzon_marinus
ENSSMAG00000009007pabpc49575.000ENSPMAG00000007885pabpc49974.385Petromyzon_marinus
ENSSMAG00000009007pabpc49192.874ENSPCIG00000020674PABPC49993.447Phascolarctos_cinereus
ENSSMAG00000009007pabpc410094.577ENSPFOG00000002682pabpc410094.577Poecilia_formosa
ENSSMAG00000009007pabpc410094.737ENSPLAG00000010112pabpc410094.737Poecilia_latipinna
ENSSMAG00000009007pabpc49895.447ENSPMEG00000019739pabpc410094.737Poecilia_mexicana
ENSSMAG00000009007pabpc410095.056ENSPREG00000001589pabpc410095.056Poecilia_reticulata
ENSSMAG00000009007pabpc49980.030ENSPPYG00000001506PABPC49979.274Pongo_abelii
ENSSMAG00000009007pabpc49974.320ENSPCAG00000003341PABPC49974.169Procavia_capensis
ENSSMAG00000009007pabpc49981.975ENSPCOG00000023725-9982.306Propithecus_coquereli
ENSSMAG00000009007pabpc48483.505ENSPCOG00000025882-9583.505Propithecus_coquereli
ENSSMAG00000009007pabpc49778.523ENSPVAG00000002187PABPC49977.852Pteropus_vampyrus
ENSSMAG00000009007pabpc410095.853ENSPNYG00000006134pabpc410095.853Pundamilia_nyererei
ENSSMAG00000009007pabpc410092.101ENSPNAG00000024355pabpc410092.101Pygocentrus_nattereri
ENSSMAG00000009007pabpc49981.173ENSRNOG00000015642Pabpc49980.775Rattus_norvegicus
ENSSMAG00000009007pabpc49979.012ENSRNOG00000028592AABR07035074.19978.605Rattus_norvegicus
ENSSMAG00000009007pabpc49982.104ENSRBIG00000039761PABPC49982.753Rhinopithecus_bieti
ENSSMAG00000009007pabpc49982.104ENSRROG00000033355PABPC49982.753Rhinopithecus_roxellana
ENSSMAG00000009007pabpc49982.104ENSSBOG00000026193PABPC49982.437Saimiri_boliviensis_boliviensis
ENSSMAG00000009007pabpc49786.356ENSSHAG00000018139PABPC49985.285Sarcophilus_harrisii
ENSSMAG00000009007pabpc49989.869ENSSFOG00015023514pabpc410089.869Scleropages_formosus
ENSSMAG00000009007pabpc410096.810ENSSDUG00000012683pabpc410096.810Seriola_dumerili
ENSSMAG00000009007pabpc410096.810ENSSLDG00000013025pabpc410096.810Seriola_lalandi_dorsalis
ENSSMAG00000009007pabpc49972.920ENSSARG00000000310PABPC49972.769Sorex_araneus
ENSSMAG00000009007pabpc49986.901ENSSPUG00000003204PABPC49986.262Sphenodon_punctatus
ENSSMAG00000009007pabpc410096.970ENSSPAG00000009252pabpc410096.970Stegastes_partitus
ENSSMAG00000009007pabpc49982.104ENSSSCG00000003660-9982.437Sus_scrofa
ENSSMAG00000009007pabpc48845.063ENSSSCG00000036170-9545.063Sus_scrofa
ENSSMAG00000009007pabpc49981.722ENSTGUG00000001266PABPC49982.024Taeniopygia_guttata
ENSSMAG00000009007pabpc410094.258ENSTRUG00000005907pabpc410094.258Takifugu_rubripes
ENSSMAG00000009007pabpc410087.879ENSTNIG00000016902pabpc410087.560Tetraodon_nigroviridis
ENSSMAG00000009007pabpc49868.624ENSTBEG00000009035PABPC49968.289Tupaia_belangeri
ENSSMAG00000009007pabpc49861.759ENSTTRG00000014340PABPC49967.450Tursiops_truncatus
ENSSMAG00000009007pabpc49982.104ENSUAMG00000000303PABPC49982.437Ursus_americanus
ENSSMAG00000009007pabpc49988.662ENSUMAG00000019585PABPC49991.084Ursus_maritimus
ENSSMAG00000009007pabpc47169.322ENSVPAG00000010041PABPC47369.322Vicugna_pacos
ENSSMAG00000009007pabpc49982.104ENSVVUG00000005215PABPC49982.437Vulpes_vulpes
ENSSMAG00000009007pabpc46796.429ENSXETG00000027221-10096.429Xenopus_tropicalis
ENSSMAG00000009007pabpc49882.484ENSXETG00000010946pabpc49981.847Xenopus_tropicalis
ENSSMAG00000009007pabpc49991.652ENSXCOG00000013190pabpc49694.340Xiphophorus_couchianus
ENSSMAG00000009007pabpc410095.056ENSXMAG00000019007pabpc410095.056Xiphophorus_maculatus

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