EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000009086 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 7466 bases
Position: chr16:204465-211930
Accession: ZDB-GENE-041114-114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000014824	YTH	PF04146.15	2.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015017	-	2729	-	ENSSMAP00000014824	675 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009086's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009086's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009086	ythdc1	60	65.947	ENSG00000083896	YTHDC1	57	60.314	Homo_sapiens
ENSSMAG00000009086	ythdc1	83	81.481	ENSAPOG00000013997	ythdc1	93	74.922	Acanthochromis_polyacanthus
ENSSMAG00000009086	ythdc1	60	65.747	ENSAMEG00000005688	YTHDC1	56	60.762	Ailuropoda_melanoleuca
ENSSMAG00000009086	ythdc1	61	79.805	ENSACIG00000019728	ythdc1	61	79.602	Amphilophus_citrinellus
ENSSMAG00000009086	ythdc1	94	85.981	ENSAOCG00000000239	ythdc1	94	85.514	Amphiprion_ocellaris
ENSSMAG00000009086	ythdc1	84	85.043	ENSAPEG00000000618	ythdc1	90	84.696	Amphiprion_percula
ENSSMAG00000009086	ythdc1	84	82.662	ENSATEG00000023007	ythdc1	92	83.012	Anabas_testudineus
ENSSMAG00000009086	ythdc1	92	54.734	ENSAPLG00000009921	YTHDC1	59	61.174	Anas_platyrhynchos
ENSSMAG00000009086	ythdc1	94	54.978	ENSACAG00000009697	YTHDC1	93	52.594	Anolis_carolinensis
ENSSMAG00000009086	ythdc1	60	65.947	ENSANAG00000001522	YTHDC1	56	60.314	Aotus_nancymaae
ENSSMAG00000009086	ythdc1	94	84.317	ENSACLG00000019371	ythdc1	94	83.670	Astatotilapia_calliptera
ENSSMAG00000009086	ythdc1	94	62.901	ENSAMXG00000006978	ythdc1	92	59.165	Astyanax_mexicanus
ENSSMAG00000009086	ythdc1	60	65.057	ENSBTAG00000015572	YTHDC1	56	60.090	Bos_taurus
ENSSMAG00000009086	ythdc1	60	65.947	ENSCJAG00000009934	YTHDC1	56	60.314	Callithrix_jacchus
ENSSMAG00000009086	ythdc1	60	65.747	ENSCAFG00000002821	YTHDC1	56	60.762	Canis_familiaris
ENSSMAG00000009086	ythdc1	60	65.747	ENSCAFG00020027112	YTHDC1	56	60.762	Canis_lupus_dingo
ENSSMAG00000009086	ythdc1	92	49.335	ENSCHIG00000004810	YTHDC1	54	54.481	Capra_hircus
ENSSMAG00000009086	ythdc1	60	65.947	ENSTSYG00000011668	YTHDC1	57	60.314	Carlito_syrichta
ENSSMAG00000009086	ythdc1	91	41.515	ENSCAPG00000008722	YTHDC1	89	36.070	Cavia_aperea
ENSSMAG00000009086	ythdc1	94	50.290	ENSCPOG00000010929	YTHDC1	54	54.110	Cavia_porcellus
ENSSMAG00000009086	ythdc1	60	65.947	ENSCCAG00000035754	YTHDC1	57	60.314	Cebus_capucinus
ENSSMAG00000009086	ythdc1	60	65.947	ENSCATG00000036320	YTHDC1	57	59.251	Cercocebus_atys
ENSSMAG00000009086	ythdc1	92	54.519	ENSCLAG00000005482	YTHDC1	58	58.261	Chinchilla_lanigera
ENSSMAG00000009086	ythdc1	60	65.525	ENSCSAG00000005252	YTHDC1	56	60.314	Chlorocebus_sabaeus
ENSSMAG00000009086	ythdc1	93	58.833	ENSCPBG00000021965	YTHDC1	62	60.987	Chrysemys_picta_bellii
ENSSMAG00000009086	ythdc1	60	65.947	ENSCANG00000004769	YTHDC1	56	60.314	Colobus_angolensis_palliatus
ENSSMAG00000009086	ythdc1	94	53.801	ENSCGRG00001000816	Ythdc1	56	60.235	Cricetulus_griseus_chok1gshd
ENSSMAG00000009086	ythdc1	92	53.592	ENSCGRG00000009807	Ythdc1	57	60.090	Cricetulus_griseus_crigri
ENSSMAG00000009086	ythdc1	94	84.688	ENSCSEG00000020404	ythdc1	94	84.375	Cynoglossus_semilaevis
ENSSMAG00000009086	ythdc1	60	88.235	ENSCVAG00000022349	ythdc1	94	79.005	Cyprinodon_variegatus
ENSSMAG00000009086	ythdc1	94	61.290	ENSDARG00000051953	ythdc1	92	58.171	Danio_rerio
ENSSMAG00000009086	ythdc1	94	53.571	ENSDNOG00000004949	YTHDC1	57	60.090	Dasypus_novemcinctus
ENSSMAG00000009086	ythdc1	60	65.947	ENSDORG00000013045	Ythdc1	57	60.314	Dipodomys_ordii
ENSSMAG00000009086	ythdc1	81	62.821	ENSETEG00000001878	YTHDC1	51	73.438	Echinops_telfairi
ENSSMAG00000009086	ythdc1	60	65.747	ENSEASG00005018383	YTHDC1	61	60.762	Equus_asinus_asinus
ENSSMAG00000009086	ythdc1	84	68.608	ENSECAG00000018303	YTHDC1	61	60.762	Equus_caballus
ENSSMAG00000009086	ythdc1	60	64.840	ENSEEUG00000015466	YTHDC1	56	60.314	Erinaceus_europaeus
ENSSMAG00000009086	ythdc1	94	59.881	ENSELUG00000014029	ythdc1	51	71.720	Esox_lucius
ENSSMAG00000009086	ythdc1	60	65.747	ENSFCAG00000026791	YTHDC1	56	60.762	Felis_catus
ENSSMAG00000009086	ythdc1	75	63.333	ENSFALG00000006581	YTHDC1	84	65.473	Ficedula_albicollis
ENSSMAG00000009086	ythdc1	60	65.707	ENSFDAG00000018560	YTHDC1	57	59.513	Fukomys_damarensis
ENSSMAG00000009086	ythdc1	92	54.882	ENSGALG00000035906	YTHDC1	55	60.948	Gallus_gallus
ENSSMAG00000009086	ythdc1	94	69.871	ENSGACG00000015486	ythdc1	94	69.297	Gasterosteus_aculeatus
ENSSMAG00000009086	ythdc1	93	58.321	ENSGAGG00000007108	YTHDC1	57	65.625	Gopherus_agassizii
ENSSMAG00000009086	ythdc1	60	65.947	ENSGGOG00000021958	YTHDC1	58	59.251	Gorilla_gorilla
ENSSMAG00000009086	ythdc1	94	84.317	ENSHBUG00000019288	ythdc1	94	83.670	Haplochromis_burtoni
ENSSMAG00000009086	ythdc1	95	44.643	ENSHGLG00000003239	-	56	47.846	Heterocephalus_glaber_female
ENSSMAG00000009086	ythdc1	60	65.707	ENSHGLG00000006319	-	56	59.629	Heterocephalus_glaber_female
ENSSMAG00000009086	ythdc1	95	42.815	ENSHGLG00100008060	-	56	45.270	Heterocephalus_glaber_male
ENSSMAG00000009086	ythdc1	94	54.184	ENSHGLG00100001556	-	58	57.391	Heterocephalus_glaber_male
ENSSMAG00000009086	ythdc1	70	80.307	ENSHCOG00000001520	ythdc1	93	73.210	Hippocampus_comes
ENSSMAG00000009086	ythdc1	94	60.648	ENSIPUG00000018136	ythdc1	58	66.351	Ictalurus_punctatus
ENSSMAG00000009086	ythdc1	60	64.706	ENSSTOG00000013652	YTHDC1	57	59.251	Ictidomys_tridecemlineatus
ENSSMAG00000009086	ythdc1	60	65.468	ENSJJAG00000010268	Ythdc1	57	59.397	Jaculus_jaculus
ENSSMAG00000009086	ythdc1	61	88.835	ENSKMAG00000006483	ythdc1	85	89.383	Kryptolebias_marmoratus
ENSSMAG00000009086	ythdc1	67	91.111	ENSLBEG00000020831	ythdc1	88	91.111	Labrus_bergylta
ENSSMAG00000009086	ythdc1	60	62.896	ENSLACG00000004893	YTHDC1	60	61.644	Latimeria_chalumnae
ENSSMAG00000009086	ythdc1	94	55.777	ENSLOCG00000003045	ythdc1	62	62.921	Lepisosteus_oculatus
ENSSMAG00000009086	ythdc1	94	55.352	ENSLAFG00000021592	YTHDC1	65	65.193	Loxodonta_africana
ENSSMAG00000009086	ythdc1	60	65.947	ENSMFAG00000031927	YTHDC1	57	59.251	Macaca_fascicularis
ENSSMAG00000009086	ythdc1	60	65.947	ENSMMUG00000002265	YTHDC1	58	59.251	Macaca_mulatta
ENSSMAG00000009086	ythdc1	60	65.947	ENSMNEG00000033751	YTHDC1	56	60.314	Macaca_nemestrina
ENSSMAG00000009086	ythdc1	60	65.947	ENSMLEG00000042147	YTHDC1	56	60.314	Mandrillus_leucophaeus
ENSSMAG00000009086	ythdc1	60	92.079	ENSMAMG00000013122	ythdc1	92	81.481	Mastacembelus_armatus
ENSSMAG00000009086	ythdc1	94	84.317	ENSMZEG00005023173	ythdc1	94	83.670	Maylandia_zebra
ENSSMAG00000009086	ythdc1	94	55.087	ENSMGAG00000010391	YTHDC1	58	60.948	Meleagris_gallopavo
ENSSMAG00000009086	ythdc1	60	65.707	ENSMAUG00000001286	Ythdc1	56	60.235	Mesocricetus_auratus
ENSSMAG00000009086	ythdc1	94	54.342	ENSMICG00000034640	YTHDC1	56	60.762	Microcebus_murinus
ENSSMAG00000009086	ythdc1	94	54.386	ENSMOCG00000020201	Ythdc1	58	59.031	Microtus_ochrogaster
ENSSMAG00000009086	ythdc1	94	56.535	ENSMODG00000020754	-	59	60.762	Monodelphis_domestica
ENSSMAG00000009086	ythdc1	50	50.435	ENSMODG00000004117	-	76	55.985	Monodelphis_domestica
ENSSMAG00000009086	ythdc1	57	49.749	ENSMODG00000009173	-	64	55.921	Monodelphis_domestica
ENSSMAG00000009086	ythdc1	84	84.386	ENSMALG00000013412	ythdc1	93	84.220	Monopterus_albus
ENSSMAG00000009086	ythdc1	60	65.707	MGP_CAROLIEiJ_G0027347	Ythdc1	57	60.090	Mus_caroli
ENSSMAG00000009086	ythdc1	94	53.944	ENSMUSG00000035851	Ythdc1	56	60.090	Mus_musculus
ENSSMAG00000009086	ythdc1	94	53.966	MGP_PahariEiJ_G0017126	Ythdc1	56	60.090	Mus_pahari
ENSSMAG00000009086	ythdc1	94	54.085	MGP_SPRETEiJ_G0028339	Ythdc1	56	60.090	Mus_spretus
ENSSMAG00000009086	ythdc1	71	67.402	ENSMPUG00000001743	YTHDC1	62	65.217	Mustela_putorius_furo
ENSSMAG00000009086	ythdc1	92	53.701	ENSMLUG00000016300	YTHDC1	58	60.538	Myotis_lucifugus
ENSSMAG00000009086	ythdc1	74	84.709	ENSNBRG00000007663	ythdc1	87	80.191	Neolamprologus_brichardi
ENSSMAG00000009086	ythdc1	60	63.453	ENSNLEG00000009202	YTHDC1	57	58.370	Nomascus_leucogenys
ENSSMAG00000009086	ythdc1	57	69.062	ENSOPRG00000008986	YTHDC1	52	63.609	Ochotona_princeps
ENSSMAG00000009086	ythdc1	94	54.455	ENSODEG00000001715	YTHDC1	57	59.071	Octodon_degus
ENSSMAG00000009086	ythdc1	94	93.182	ENSONIG00000012651	ythdc1	94	83.981	Oreochromis_niloticus
ENSSMAG00000009086	ythdc1	60	65.394	ENSOANG00000014398	YTHDC1	51	64.662	Ornithorhynchus_anatinus
ENSSMAG00000009086	ythdc1	94	51.608	ENSOCUG00000015886	YTHDC1	63	65.217	Oryctolagus_cuniculus
ENSSMAG00000009086	ythdc1	94	77.656	ENSORLG00000030544	ythdc1	95	77.656	Oryzias_latipes
ENSSMAG00000009086	ythdc1	94	78.003	ENSORLG00020019316	ythdc1	95	77.847	Oryzias_latipes_hni
ENSSMAG00000009086	ythdc1	94	74.689	ENSOMEG00000000551	ythdc1	95	73.913	Oryzias_melastigma
ENSSMAG00000009086	ythdc1	60	65.982	ENSOGAG00000003362	YTHDC1	57	60.762	Otolemur_garnettii
ENSSMAG00000009086	ythdc1	60	65.057	ENSOARG00000008633	YTHDC1	56	60.090	Ovis_aries
ENSSMAG00000009086	ythdc1	60	65.947	ENSPPAG00000041315	YTHDC1	58	59.251	Pan_paniscus
ENSSMAG00000009086	ythdc1	60	65.707	ENSPPRG00000011979	YTHDC1	57	59.692	Panthera_pardus
ENSSMAG00000009086	ythdc1	60	65.228	ENSPTIG00000015527	YTHDC1	58	59.251	Panthera_tigris_altaica
ENSSMAG00000009086	ythdc1	60	65.947	ENSPTRG00000016105	YTHDC1	58	59.251	Pan_troglodytes
ENSSMAG00000009086	ythdc1	60	65.947	ENSPANG00000021590	YTHDC1	57	59.251	Papio_anubis
ENSSMAG00000009086	ythdc1	94	59.038	ENSPKIG00000018497	ythdc1	73	60.626	Paramormyrops_kingsleyae
ENSSMAG00000009086	ythdc1	92	55.556	ENSPSIG00000002782	YTHDC1	59	60.538	Pelodiscus_sinensis
ENSSMAG00000009086	ythdc1	58	72.892	ENSPMGG00000000970	-	77	72.136	Periophthalmus_magnuspinnatus
ENSSMAG00000009086	ythdc1	92	52.983	ENSPEMG00000013850	Ythdc1	57	60.090	Peromyscus_maniculatus_bairdii
ENSSMAG00000009086	ythdc1	94	56.535	ENSPCIG00000006870	YTHDC1	59	60.762	Phascolarctos_cinereus
ENSSMAG00000009086	ythdc1	94	81.388	ENSPFOG00000013404	ythdc1	94	81.703	Poecilia_formosa
ENSSMAG00000009086	ythdc1	60	89.383	ENSPLAG00000011079	ythdc1	85	90.050	Poecilia_latipinna
ENSSMAG00000009086	ythdc1	94	81.703	ENSPMEG00000009238	ythdc1	94	82.019	Poecilia_mexicana
ENSSMAG00000009086	ythdc1	82	77.698	ENSPREG00000016973	ythdc1	90	79.317	Poecilia_reticulata
ENSSMAG00000009086	ythdc1	60	65.525	ENSPPYG00000014726	YTHDC1	65	60.314	Pongo_abelii
ENSSMAG00000009086	ythdc1	94	51.111	ENSPCOG00000019105	YTHDC1	53	56.490	Propithecus_coquereli
ENSSMAG00000009086	ythdc1	60	62.529	ENSPVAG00000015551	YTHDC1	56	57.623	Pteropus_vampyrus
ENSSMAG00000009086	ythdc1	94	84.317	ENSPNYG00000011687	ythdc1	94	83.670	Pundamilia_nyererei
ENSSMAG00000009086	ythdc1	94	63.982	ENSPNAG00000028365	ythdc1	92	59.347	Pygocentrus_nattereri
ENSSMAG00000009086	ythdc1	60	64.126	ENSRNOG00000001996	Ythdc1	57	59.031	Rattus_norvegicus
ENSSMAG00000009086	ythdc1	60	64.640	ENSRBIG00000028279	YTHDC1	57	59.513	Rhinopithecus_bieti
ENSSMAG00000009086	ythdc1	60	65.947	ENSRROG00000035028	YTHDC1	56	60.314	Rhinopithecus_roxellana
ENSSMAG00000009086	ythdc1	60	65.947	ENSSBOG00000022353	YTHDC1	57	59.251	Saimiri_boliviensis_boliviensis
ENSSMAG00000009086	ythdc1	94	55.800	ENSSHAG00000002538	YTHDC1	65	60.762	Sarcophilus_harrisii
ENSSMAG00000009086	ythdc1	94	60.310	ENSSFOG00015003298	ythdc1	58	68.171	Scleropages_formosus
ENSSMAG00000009086	ythdc1	94	86.244	ENSSDUG00000022008	ythdc1	94	86.244	Seriola_dumerili
ENSSMAG00000009086	ythdc1	94	85.935	ENSSLDG00000007926	ythdc1	94	85.935	Seriola_lalandi_dorsalis
ENSSMAG00000009086	ythdc1	60	64.828	ENSSARG00000010960	YTHDC1	71	60.090	Sorex_araneus
ENSSMAG00000009086	ythdc1	94	55.105	ENSSPUG00000009357	YTHDC1	92	52.722	Sphenodon_punctatus
ENSSMAG00000009086	ythdc1	94	85.626	ENSSPAG00000011449	ythdc1	94	85.162	Stegastes_partitus
ENSSMAG00000009086	ythdc1	60	65.747	ENSSSCG00000035505	YTHDC1	61	59.692	Sus_scrofa
ENSSMAG00000009086	ythdc1	94	54.678	ENSTGUG00000004452	-	58	61.211	Taeniopygia_guttata
ENSSMAG00000009086	ythdc1	95	64.099	ENSTRUG00000010142	ythdc1	63	78.660	Takifugu_rubripes
ENSSMAG00000009086	ythdc1	96	71.166	ENSTNIG00000013243	ythdc1	61	84.080	Tetraodon_nigroviridis
ENSSMAG00000009086	ythdc1	60	65.668	ENSTBEG00000011546	YTHDC1	50	64.962	Tupaia_belangeri
ENSSMAG00000009086	ythdc1	60	64.598	ENSTTRG00000005083	YTHDC1	56	59.641	Tursiops_truncatus
ENSSMAG00000009086	ythdc1	60	65.747	ENSUAMG00000010388	YTHDC1	61	60.762	Ursus_americanus
ENSSMAG00000009086	ythdc1	92	50.530	ENSUMAG00000013668	YTHDC1	60	52.655	Ursus_maritimus
ENSSMAG00000009086	ythdc1	94	53.216	ENSVPAG00000009040	YTHDC1	56	60.235	Vicugna_pacos
ENSSMAG00000009086	ythdc1	60	65.747	ENSVVUG00000005387	YTHDC1	61	60.762	Vulpes_vulpes
ENSSMAG00000009086	ythdc1	94	57.903	ENSXETG00000017960	ythdc1	57	65.783	Xenopus_tropicalis
ENSSMAG00000009086	ythdc1	53	74.312	ENSXCOG00000000530	ythdc1	82	70.940	Xiphophorus_couchianus
ENSSMAG00000009086	ythdc1	94	80.377	ENSXMAG00000005196	ythdc1	94	80.377	Xiphophorus_maculatus