EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000009115 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 12634 bases
Position: chr9:20021128-20033761
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015309	zf-C2H2	PF00096.26	3.5e-39	1	6
ENSSMAP00000015309	zf-C2H2	PF00096.26	3.5e-39	2	6
ENSSMAP00000015309	zf-C2H2	PF00096.26	3.5e-39	3	6
ENSSMAP00000015309	zf-C2H2	PF00096.26	3.5e-39	4	6
ENSSMAP00000015309	zf-C2H2	PF00096.26	3.5e-39	5	6
ENSSMAP00000015309	zf-C2H2	PF00096.26	3.5e-39	6	6
ENSSMAP00000015013	zf-C2H2	PF00096.26	8.2e-38	1	7
ENSSMAP00000015013	zf-C2H2	PF00096.26	8.2e-38	2	7
ENSSMAP00000015013	zf-C2H2	PF00096.26	8.2e-38	3	7
ENSSMAP00000015013	zf-C2H2	PF00096.26	8.2e-38	4	7
ENSSMAP00000015013	zf-C2H2	PF00096.26	8.2e-38	5	7
ENSSMAP00000015013	zf-C2H2	PF00096.26	8.2e-38	6	7
ENSSMAP00000015013	zf-C2H2	PF00096.26	8.2e-38	7	7
ENSSMAP00000015760	zf-C2H2	PF00096.26	9.2e-35	1	5
ENSSMAP00000015760	zf-C2H2	PF00096.26	9.2e-35	2	5
ENSSMAP00000015760	zf-C2H2	PF00096.26	9.2e-35	3	5
ENSSMAP00000015760	zf-C2H2	PF00096.26	9.2e-35	4	5
ENSSMAP00000015760	zf-C2H2	PF00096.26	9.2e-35	5	5
ENSSMAP00000015147	zf-C2H2	PF00096.26	5.7e-31	1	6
ENSSMAP00000015147	zf-C2H2	PF00096.26	5.7e-31	2	6
ENSSMAP00000015147	zf-C2H2	PF00096.26	5.7e-31	3	6
ENSSMAP00000015147	zf-C2H2	PF00096.26	5.7e-31	4	6
ENSSMAP00000015147	zf-C2H2	PF00096.26	5.7e-31	5	6
ENSSMAP00000015147	zf-C2H2	PF00096.26	5.7e-31	6	6
ENSSMAP00000015572	zf-C2H2	PF00096.26	7.1e-22	1	3
ENSSMAP00000015572	zf-C2H2	PF00096.26	7.1e-22	2	3
ENSSMAP00000015572	zf-C2H2	PF00096.26	7.1e-22	3	3
ENSSMAP00000015549	zf-C2H2	PF00096.26	7.4e-21	1	3
ENSSMAP00000015549	zf-C2H2	PF00096.26	7.4e-21	2	3
ENSSMAP00000015549	zf-C2H2	PF00096.26	7.4e-21	3	3
ENSSMAP00000015766	zf-C2H2	PF00096.26	5.3e-14	1	3
ENSSMAP00000015766	zf-C2H2	PF00096.26	5.3e-14	2	3
ENSSMAP00000015766	zf-C2H2	PF00096.26	5.3e-14	3	3
ENSSMAP00000015586	zf-C2H2	PF00096.26	2.1e-05	1	1
ENSSMAP00000015760	zf-met	PF12874.7	0.00046	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015206	-	996	-	ENSSMAP00000015013	331 (aa)	-	-
ENSSMAT00000015745	-	624	-	ENSSMAP00000015549	207 (aa)	-	-
ENSSMAT00000015783	-	234	-	ENSSMAP00000015586	77 (aa)	-	-
ENSSMAT00000015502	-	1194	-	ENSSMAP00000015309	397 (aa)	-	-
ENSSMAT00000015770	-	2258	-	ENSSMAP00000015572	365 (aa)	-	-
ENSSMAT00000015341	-	945	-	ENSSMAP00000015147	314 (aa)	-	-
ENSSMAT00000015964	-	3888	-	ENSSMAP00000015766	330 (aa)	-	-
ENSSMAT00000015959	-	987	-	ENSSMAP00000015760	328 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000009115	-	94	55.769	ENSSMAG00000013828	-	74	44.934
ENSSMAG00000009115	-	96	48.611	ENSSMAG00000013291	-	92	51.111
ENSSMAG00000009115	-	97	51.220	ENSSMAG00000007561	znf236	75	44.737
ENSSMAG00000009115	-	92	63.158	ENSSMAG00000009685	-	97	56.028
ENSSMAG00000009115	-	84	47.059	ENSSMAG00000004252	-	87	46.429
ENSSMAG00000009115	-	87	45.000	ENSSMAG00000004259	-	88	45.000
ENSSMAG00000009115	-	86	50.526	ENSSMAG00000009609	-	99	50.526
ENSSMAG00000009115	-	82	41.071	ENSSMAG00000007380	znf710b	50	32.194
ENSSMAG00000009115	-	90	49.275	ENSSMAG00000019949	-	78	49.231
ENSSMAG00000009115	-	86	47.761	ENSSMAG00000002031	-	50	41.259
ENSSMAG00000009115	-	97	50.355	ENSSMAG00000015347	-	95	51.724
ENSSMAG00000009115	-	94	54.348	ENSSMAG00000015849	znf319b	92	37.387
ENSSMAG00000009115	-	92	40.299	ENSSMAG00000003204	zgc:171929	73	40.299
ENSSMAG00000009115	-	87	45.652	ENSSMAG00000004429	-	89	45.652
ENSSMAG00000009115	-	88	51.515	ENSSMAG00000008308	-	68	42.963
ENSSMAG00000009115	-	98	54.455	ENSSMAG00000006197	-	100	52.846
ENSSMAG00000009115	-	87	42.308	ENSSMAG00000019207	scrt1b	55	37.762
ENSSMAG00000009115	-	92	40.845	ENSSMAG00000015181	gfi1b	68	41.593
ENSSMAG00000009115	-	87	46.552	ENSSMAG00000012378	znf646	76	38.043
ENSSMAG00000009115	-	96	56.364	ENSSMAG00000005076	-	99	56.250
ENSSMAG00000009115	-	90	50.943	ENSSMAG00000002391	ZNF319	86	42.754
ENSSMAG00000009115	-	90	50.980	ENSSMAG00000006825	-	99	43.709
ENSSMAG00000009115	-	88	53.448	ENSSMAG00000015041	si:dkey-7i4.5	96	45.174
ENSSMAG00000009115	-	89	35.000	ENSSMAG00000008834	-	76	35.000
ENSSMAG00000009115	-	73	52.632	ENSSMAG00000017507	-	94	50.000
ENSSMAG00000009115	-	76	50.000	ENSSMAG00000003106	klf5b	69	46.053
ENSSMAG00000009115	-	91	58.333	ENSSMAG00000007396	-	93	41.518
ENSSMAG00000009115	-	99	41.549	ENSSMAG00000005081	-	91	44.318
ENSSMAG00000009115	-	86	38.372	ENSSMAG00000020844	patz1	63	44.318
ENSSMAG00000009115	-	84	60.494	ENSSMAG00000009679	-	91	55.670
ENSSMAG00000009115	-	87	53.061	ENSSMAG00000021271	-	68	40.964
ENSSMAG00000009115	-	96	52.727	ENSSMAG00000014844	-	98	48.276
ENSSMAG00000009115	-	95	46.875	ENSSMAG00000009020	znf526	59	36.697
ENSSMAG00000009115	-	90	38.182	ENSSMAG00000000404	-	86	36.364
ENSSMAG00000009115	-	97	63.043	ENSSMAG00000013663	-	87	60.000
ENSSMAG00000009115	-	92	59.184	ENSSMAG00000003594	-	95	45.918
ENSSMAG00000009115	-	94	48.000	ENSSMAG00000017485	-	51	36.735
ENSSMAG00000009115	-	90	32.195	ENSSMAG00000002899	znf131	56	36.190
ENSSMAG00000009115	-	87	41.284	ENSSMAG00000019364	snai2	66	41.284
ENSSMAG00000009115	-	95	51.471	ENSSMAG00000018844	prdm5	84	49.296
ENSSMAG00000009115	-	94	56.061	ENSSMAG00000006902	-	99	50.526
ENSSMAG00000009115	-	83	45.333	ENSSMAG00000013652	snai1a	71	41.667
ENSSMAG00000009115	-	96	41.250	ENSSMAG00000014720	e4f1	70	35.878
ENSSMAG00000009115	-	100	47.458	ENSSMAG00000006155	-	97	47.253
ENSSMAG00000009115	-	97	46.667	ENSSMAG00000015356	-	95	46.667
ENSSMAG00000009115	-	82	56.098	ENSSMAG00000014597	-	100	37.297
ENSSMAG00000009115	-	87	70.588	ENSSMAG00000021251	-	94	49.180
ENSSMAG00000009115	-	92	50.000	ENSSMAG00000014864	-	100	46.000
ENSSMAG00000009115	-	79	54.545	ENSSMAG00000000056	-	53	43.662
ENSSMAG00000009115	-	97	32.558	ENSSMAG00000001359	-	88	38.182
ENSSMAG00000009115	-	87	31.618	ENSSMAG00000001190	PRDM15	53	34.821
ENSSMAG00000009115	-	87	43.137	ENSSMAG00000008907	zbtb41	60	41.818
ENSSMAG00000009115	-	92	37.037	ENSSMAG00000002598	-	50	36.129
ENSSMAG00000009115	-	100	47.727	ENSSMAG00000017045	-	95	47.727
ENSSMAG00000009115	-	99	42.105	ENSSMAG00000013676	-	82	45.390
ENSSMAG00000009115	-	90	38.400	ENSSMAG00000005122	-	60	39.394
ENSSMAG00000009115	-	97	52.083	ENSSMAG00000019980	-	64	41.667
ENSSMAG00000009115	-	88	51.613	ENSSMAG00000015282	-	92	42.604

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009115	-	90	58.000	ENSAPOG00000013511	-	61	44.366	Acanthochromis_polyacanthus
ENSSMAG00000009115	-	97	43.158	ENSAPOG00000004328	-	89	45.833	Acanthochromis_polyacanthus
ENSSMAG00000009115	-	97	39.241	ENSACIG00000010739	-	93	40.928	Amphilophus_citrinellus
ENSSMAG00000009115	-	96	50.000	ENSAOCG00000007045	-	85	45.833	Amphiprion_ocellaris
ENSSMAG00000009115	-	88	58.000	ENSAPEG00000016483	-	60	51.000	Amphiprion_percula
ENSSMAG00000009115	-	96	51.020	ENSAPEG00000001596	-	88	45.405	Amphiprion_percula
ENSSMAG00000009115	-	90	50.000	ENSATEG00000006085	-	91	43.147	Anabas_testudineus
ENSSMAG00000009115	-	97	56.522	ENSACAG00000025537	-	96	56.522	Anolis_carolinensis
ENSSMAG00000009115	-	97	55.882	ENSACAG00000000082	-	97	55.882	Anolis_carolinensis
ENSSMAG00000009115	-	90	45.946	ENSAMXG00000033013	-	85	48.366	Astyanax_mexicanus
ENSSMAG00000009115	-	91	53.846	ENSAMXG00000026143	-	96	52.414	Astyanax_mexicanus
ENSSMAG00000009115	-	94	51.923	ENSAMXG00000032237	-	96	51.923	Astyanax_mexicanus
ENSSMAG00000009115	-	90	52.239	ENSAMXG00000017199	-	50	45.390	Astyanax_mexicanus
ENSSMAG00000009115	-	86	47.706	ENSAMXG00000035145	-	85	45.161	Astyanax_mexicanus
ENSSMAG00000009115	-	90	56.818	ENSAMXG00000012873	-	88	56.818	Astyanax_mexicanus
ENSSMAG00000009115	-	88	55.172	ENSAMXG00000036257	-	93	52.518	Astyanax_mexicanus
ENSSMAG00000009115	-	86	52.439	ENSAMXG00000035949	-	81	52.439	Astyanax_mexicanus
ENSSMAG00000009115	-	89	46.930	ENSCVAG00000011235	-	92	46.930	Cyprinodon_variegatus
ENSSMAG00000009115	-	92	58.000	ENSELUG00000013844	-	89	41.270	Esox_lucius
ENSSMAG00000009115	-	92	55.556	ENSELUG00000021287	-	87	47.917	Esox_lucius
ENSSMAG00000009115	-	96	53.846	ENSELUG00000013357	-	83	52.128	Esox_lucius
ENSSMAG00000009115	-	90	53.846	ENSFHEG00000019915	-	84	43.125	Fundulus_heteroclitus
ENSSMAG00000009115	-	91	57.692	ENSGMOG00000003238	-	99	50.633	Gadus_morhua
ENSSMAG00000009115	-	84	51.786	ENSGAFG00000012977	-	90	44.379	Gambusia_affinis
ENSSMAG00000009115	-	90	56.604	ENSGAFG00000003150	-	81	53.191	Gambusia_affinis
ENSSMAG00000009115	-	88	58.182	ENSIPUG00000006916	-	72	58.182	Ictalurus_punctatus
ENSSMAG00000009115	-	81	62.500	ENSIPUG00000021556	-	83	62.500	Ictalurus_punctatus
ENSSMAG00000009115	-	87	53.030	ENSIPUG00000004428	-	88	47.015	Ictalurus_punctatus
ENSSMAG00000009115	-	87	51.020	ENSKMAG00000004988	-	96	38.973	Kryptolebias_marmoratus
ENSSMAG00000009115	-	96	52.239	ENSLOCG00000014366	-	100	51.656	Lepisosteus_oculatus
ENSSMAG00000009115	-	90	52.113	ENSLOCG00000014144	-	100	46.774	Lepisosteus_oculatus
ENSSMAG00000009115	-	87	50.000	ENSMAMG00000019301	-	99	45.946	Mastacembelus_armatus
ENSSMAG00000009115	-	88	52.830	ENSMAMG00000016542	-	67	44.348	Mastacembelus_armatus
ENSSMAG00000009115	-	92	49.275	ENSMMOG00000009852	-	92	47.619	Mola_mola
ENSSMAG00000009115	-	88	60.000	ENSMALG00000005554	-	85	60.000	Monopterus_albus
ENSSMAG00000009115	-	95	56.757	ENSOCUG00000005876	-	100	55.263	Oryctolagus_cuniculus
ENSSMAG00000009115	-	95	57.692	ENSPKIG00000006616	-	74	47.727	Paramormyrops_kingsleyae
ENSSMAG00000009115	-	82	52.727	ENSPMGG00000017633	-	89	41.791	Periophthalmus_magnuspinnatus
ENSSMAG00000009115	-	81	51.020	ENSPFOG00000010682	-	93	44.934	Poecilia_formosa
ENSSMAG00000009115	-	92	47.917	ENSPLAG00000002892	-	90	41.045	Poecilia_latipinna
ENSSMAG00000009115	-	82	51.786	ENSPMEG00000001399	-	93	44.934	Poecilia_mexicana
ENSSMAG00000009115	-	84	51.786	ENSPREG00000001386	-	99	43.787	Poecilia_reticulata
ENSSMAG00000009115	-	97	41.758	ENSPREG00000002582	-	61	42.254	Poecilia_reticulata
ENSSMAG00000009115	-	88	58.824	ENSPNAG00000015116	-	67	58.824	Pygocentrus_nattereri
ENSSMAG00000009115	-	97	53.704	ENSPNAG00000025570	-	89	46.099	Pygocentrus_nattereri
ENSSMAG00000009115	-	87	61.538	ENSPNAG00000000219	-	86	54.610	Pygocentrus_nattereri
ENSSMAG00000009115	-	91	59.615	ENSSFOG00015006108	-	52	59.615	Scleropages_formosus
ENSSMAG00000009115	-	90	52.830	ENSSDUG00000002195	-	99	51.111	Seriola_dumerili
ENSSMAG00000009115	-	99	50.000	ENSSDUG00000006463	-	99	40.418	Seriola_dumerili
ENSSMAG00000009115	-	99	50.000	ENSSLDG00000006724	-	97	45.783	Seriola_lalandi_dorsalis
ENSSMAG00000009115	-	86	63.043	ENSSLDG00000020727	-	95	59.091	Seriola_lalandi_dorsalis
ENSSMAG00000009115	-	95	55.357	ENSSPAG00000021008	-	87	63.043	Stegastes_partitus
ENSSMAG00000009115	-	84	49.057	ENSSPAG00000012960	-	80	45.977	Stegastes_partitus
ENSSMAG00000009115	-	99	52.000	ENSTRUG00000005321	-	99	43.216	Takifugu_rubripes
ENSSMAG00000009115	-	84	50.725	ENSTRUG00000021675	-	86	49.306	Takifugu_rubripes
ENSSMAG00000009115	-	92	60.000	ENSTNIG00000000320	-	100	56.250	Tetraodon_nigroviridis
ENSSMAG00000009115	-	91	53.191	ENSTNIG00000008200	-	99	48.611	Tetraodon_nigroviridis
ENSSMAG00000009115	-	94	62.745	ENSXETG00000006575	znf420	73	62.745	Xenopus_tropicalis
ENSSMAG00000009115	-	84	55.769	ENSXCOG00000009665	-	93	43.750	Xiphophorus_couchianus
ENSSMAG00000009115	-	81	50.877	ENSXMAG00000028625	-	93	45.374	Xiphophorus_maculatus