EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000009156 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 16693 bases
Position: chr6:17720948-17737640
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000014967	RRM_1	PF00076.22	2.7e-14	1	1
ENSSMAP00000014997	RRM_1	PF00076.22	6.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015190	-	846	-	ENSSMAP00000014997	281 (aa)	-	-
ENSSMAT00000015159	-	1653	-	ENSSMAP00000014967	369 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009156's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009156's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000009156	-	71	85.878	ENSSMAG00000018824	MSI1	97	85.878
ENSSMAG00000009156	-	71	69.466	ENSSMAG00000018484	msi2a	96	69.847

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009156	-	71	85.818	ENSG00000135097	MSI1	94	85.818	Homo_sapiens
ENSSMAG00000009156	-	73	90.640	ENSAPOG00000023458	-	94	92.366	Acanthochromis_polyacanthus
ENSSMAG00000009156	-	73	98.020	ENSAPOG00000003191	MSI1	94	98.084	Acanthochromis_polyacanthus
ENSSMAG00000009156	-	72	88.462	ENSAMEG00000013302	MSI1	100	60.550	Ailuropoda_melanoleuca
ENSSMAG00000009156	-	78	93.151	ENSACIG00000017754	-	72	97.059	Amphilophus_citrinellus
ENSSMAG00000009156	-	73	98.020	ENSAOCG00000003804	MSI1	94	98.084	Amphiprion_ocellaris
ENSSMAG00000009156	-	71	79.310	ENSAOCG00000009031	-	95	79.310	Amphiprion_ocellaris
ENSSMAG00000009156	-	73	90.640	ENSAPEG00000006857	-	79	92.366	Amphiprion_percula
ENSSMAG00000009156	-	73	98.020	ENSAPEG00000003245	MSI1	94	98.084	Amphiprion_percula
ENSSMAG00000009156	-	75	91.469	ENSATEG00000017059	MSI1	95	92.748	Anabas_testudineus
ENSSMAG00000009156	-	71	90.530	ENSATEG00000023779	-	93	90.530	Anabas_testudineus
ENSSMAG00000009156	-	71	85.348	ENSACAG00000002762	MSI1	99	86.447	Anolis_carolinensis
ENSSMAG00000009156	-	53	87.817	ENSANAG00000027901	-	82	86.935	Aotus_nancymaae
ENSSMAG00000009156	-	71	85.818	ENSANAG00000027151	MSI1	94	85.818	Aotus_nancymaae
ENSSMAG00000009156	-	73	91.584	ENSACLG00000000117	-	100	93.103	Astatotilapia_calliptera
ENSSMAG00000009156	-	73	96.059	ENSACLG00000011230	MSI1	94	96.565	Astatotilapia_calliptera
ENSSMAG00000009156	-	71	88.931	ENSAMXG00000038960	msi1	76	88.931	Astyanax_mexicanus
ENSSMAG00000009156	-	71	85.818	ENSBTAG00000009800	MSI1	100	85.818	Bos_taurus
ENSSMAG00000009156	-	71	85.818	ENSCJAG00000008578	MSI1	94	85.818	Callithrix_jacchus
ENSSMAG00000009156	-	71	85.455	ENSCAFG00000010283	MSI1	94	85.455	Canis_familiaris
ENSSMAG00000009156	-	71	85.818	ENSCAFG00020020585	MSI1	88	85.818	Canis_lupus_dingo
ENSSMAG00000009156	-	71	83.571	ENSCHIG00000024304	MSI1	95	83.571	Capra_hircus
ENSSMAG00000009156	-	79	78.481	ENSTSYG00000033949	MSI1	95	85.818	Carlito_syrichta
ENSSMAG00000009156	-	70	86.131	ENSCAPG00000003919	MSI1	78	86.131	Cavia_aperea
ENSSMAG00000009156	-	71	85.818	ENSCPOG00000012361	MSI1	100	85.818	Cavia_porcellus
ENSSMAG00000009156	-	71	85.818	ENSCCAG00000035567	MSI1	94	85.818	Cebus_capucinus
ENSSMAG00000009156	-	71	85.818	ENSCATG00000030019	MSI1	94	85.818	Cercocebus_atys
ENSSMAG00000009156	-	71	85.818	ENSCLAG00000011329	MSI1	100	85.818	Chinchilla_lanigera
ENSSMAG00000009156	-	50	84.737	ENSCSAG00000002265	MSI1	89	84.737	Chlorocebus_sabaeus
ENSSMAG00000009156	-	71	89.015	ENSCPBG00000011349	MSI1	94	89.015	Chrysemys_picta_bellii
ENSSMAG00000009156	-	71	85.818	ENSCANG00000040651	MSI1	99	85.818	Colobus_angolensis_palliatus
ENSSMAG00000009156	-	71	85.818	ENSCGRG00001018883	Msi1	94	85.818	Cricetulus_griseus_chok1gshd
ENSSMAG00000009156	-	71	85.818	ENSCGRG00000002191	Msi1	82	85.818	Cricetulus_griseus_crigri
ENSSMAG00000009156	-	76	94.836	ENSCSEG00000005834	-	94	96.729	Cynoglossus_semilaevis
ENSSMAG00000009156	-	73	89.604	ENSCSEG00000008352	-	94	91.571	Cynoglossus_semilaevis
ENSSMAG00000009156	-	73	80.597	ENSCSEG00000011032	MSI1	100	80.460	Cynoglossus_semilaevis
ENSSMAG00000009156	-	73	92.079	ENSCVAG00000009100	MSI1	94	93.487	Cyprinodon_variegatus
ENSSMAG00000009156	-	77	76.498	ENSCVAG00000017463	-	89	79.724	Cyprinodon_variegatus
ENSSMAG00000009156	-	75	90.000	ENSDARG00000102015	CABZ01037298.1	89	91.163	Danio_rerio
ENSSMAG00000009156	-	71	83.588	ENSDARG00000010710	msi1	100	92.991	Danio_rerio
ENSSMAG00000009156	-	71	82.061	ENSDNOG00000005713	MSI1	91	82.061	Dasypus_novemcinctus
ENSSMAG00000009156	-	71	85.818	ENSDORG00000005610	Msi1	93	85.818	Dipodomys_ordii
ENSSMAG00000009156	-	71	82.182	ENSETEG00000004756	MSI1	99	82.182	Echinops_telfairi
ENSSMAG00000009156	-	71	85.818	ENSEASG00005004736	MSI1	94	85.818	Equus_asinus_asinus
ENSSMAG00000009156	-	71	85.818	ENSECAG00000017526	MSI1	94	85.818	Equus_caballus
ENSSMAG00000009156	-	76	82.511	ENSELUG00000023219	MSI1	92	84.397	Esox_lucius
ENSSMAG00000009156	-	71	84.291	ENSELUG00000023280	-	100	83.908	Esox_lucius
ENSSMAG00000009156	-	71	85.818	ENSFCAG00000011007	MSI1	94	85.818	Felis_catus
ENSSMAG00000009156	-	71	89.394	ENSFALG00000007574	MSI1	88	89.394	Ficedula_albicollis
ENSSMAG00000009156	-	71	85.455	ENSFDAG00000019586	MSI1	99	85.455	Fukomys_damarensis
ENSSMAG00000009156	-	73	91.626	ENSFHEG00000022446	MSI1	94	93.130	Fundulus_heteroclitus
ENSSMAG00000009156	-	73	97.030	ENSFHEG00000003560	-	94	97.318	Fundulus_heteroclitus
ENSSMAG00000009156	-	73	89.604	ENSGMOG00000001006	MSI1	94	90.805	Gadus_morhua
ENSSMAG00000009156	-	72	91.787	ENSGMOG00000017838	-	75	93.182	Gadus_morhua
ENSSMAG00000009156	-	72	88.293	ENSGALG00000007227	MSI1	90	76.109	Gallus_gallus
ENSSMAG00000009156	-	70	69.173	ENSGAFG00000005860	-	89	69.173	Gambusia_affinis
ENSSMAG00000009156	-	73	97.030	ENSGAFG00000021522	MSI1	94	97.318	Gambusia_affinis
ENSSMAG00000009156	-	71	90.840	ENSGACG00000012679	MSI1	94	90.840	Gasterosteus_aculeatus
ENSSMAG00000009156	-	71	92.336	ENSGACG00000008674	-	94	92.336	Gasterosteus_aculeatus
ENSSMAG00000009156	-	71	89.015	ENSGAGG00000016037	MSI1	94	89.015	Gopherus_agassizii
ENSSMAG00000009156	-	71	85.818	ENSGGOG00000010328	MSI1	88	85.818	Gorilla_gorilla
ENSSMAG00000009156	-	73	96.059	ENSHBUG00000021921	MSI1	94	96.565	Haplochromis_burtoni
ENSSMAG00000009156	-	73	91.584	ENSHBUG00000011841	-	94	93.103	Haplochromis_burtoni
ENSSMAG00000009156	-	71	85.455	ENSHGLG00000012782	MSI1	94	85.455	Heterocephalus_glaber_female
ENSSMAG00000009156	-	71	85.455	ENSHGLG00100016848	MSI1	99	85.455	Heterocephalus_glaber_male
ENSSMAG00000009156	-	74	94.634	ENSHCOG00000012019	MSI1	95	95.565	Hippocampus_comes
ENSSMAG00000009156	-	80	91.089	ENSHCOG00000012067	-	89	92.720	Hippocampus_comes
ENSSMAG00000009156	-	71	88.931	ENSIPUG00000001976	msi1	95	88.931	Ictalurus_punctatus
ENSSMAG00000009156	-	71	85.818	ENSSTOG00000009799	MSI1	88	85.818	Ictidomys_tridecemlineatus
ENSSMAG00000009156	-	71	85.818	ENSJJAG00000010463	Msi1	94	85.818	Jaculus_jaculus
ENSSMAG00000009156	-	71	70.438	ENSJJAG00000010643	-	94	72.031	Jaculus_jaculus
ENSSMAG00000009156	-	73	91.089	ENSKMAG00000011251	MSI1	94	92.720	Kryptolebias_marmoratus
ENSSMAG00000009156	-	71	90.038	ENSKMAG00000019877	-	100	90.038	Kryptolebias_marmoratus
ENSSMAG00000009156	-	73	91.626	ENSLBEG00000008789	MSI1	94	93.130	Labrus_bergylta
ENSSMAG00000009156	-	82	90.421	ENSLBEG00000001375	-	94	97.318	Labrus_bergylta
ENSSMAG00000009156	-	71	80.866	ENSLACG00000018287	MSI1	100	80.866	Latimeria_chalumnae
ENSSMAG00000009156	-	73	81.364	ENSLAFG00000009412	MSI1	100	75.090	Loxodonta_africana
ENSSMAG00000009156	-	71	85.818	ENSMFAG00000001798	MSI1	100	85.818	Macaca_fascicularis
ENSSMAG00000009156	-	71	85.818	ENSMMUG00000031527	MSI1	96	85.818	Macaca_mulatta
ENSSMAG00000009156	-	71	85.818	ENSMNEG00000040034	MSI1	94	85.818	Macaca_nemestrina
ENSSMAG00000009156	-	71	85.818	ENSMLEG00000003921	MSI1	99	85.818	Mandrillus_leucophaeus
ENSSMAG00000009156	-	71	92.337	ENSMAMG00000002279	MSI1	94	92.337	Mastacembelus_armatus
ENSSMAG00000009156	-	72	97.525	ENSMAMG00000018426	-	94	97.701	Mastacembelus_armatus
ENSSMAG00000009156	-	73	91.584	ENSMZEG00005000340	-	94	93.103	Maylandia_zebra
ENSSMAG00000009156	-	73	96.059	ENSMZEG00005026892	MSI1	94	96.565	Maylandia_zebra
ENSSMAG00000009156	-	71	85.818	ENSMICG00000033181	MSI1	94	85.818	Microcebus_murinus
ENSSMAG00000009156	-	71	85.455	ENSMOCG00000002286	Msi1	94	85.455	Microtus_ochrogaster
ENSSMAG00000009156	-	71	78.161	ENSMMOG00000010492	MSI1	96	78.161	Mola_mola
ENSSMAG00000009156	-	73	88.119	ENSMMOG00000012265	-	99	90.038	Mola_mola
ENSSMAG00000009156	-	71	53.237	ENSMODG00000003189	-	100	53.237	Monodelphis_domestica
ENSSMAG00000009156	-	73	91.584	ENSMALG00000017889	MSI1	94	93.103	Monopterus_albus
ENSSMAG00000009156	-	73	96.040	ENSMALG00000001426	-	100	96.552	Monopterus_albus
ENSSMAG00000009156	-	71	85.091	MGP_CAROLIEiJ_G0027626	Msi1	98	83.333	Mus_caroli
ENSSMAG00000009156	-	72	87.805	ENSMUSG00000054256	Msi1	99	88.636	Mus_musculus
ENSSMAG00000009156	-	72	88.235	MGP_PahariEiJ_G0024206	Msi1	94	88.973	Mus_pahari
ENSSMAG00000009156	-	71	85.091	MGP_SPRETEiJ_G0028624	Msi1	98	83.333	Mus_spretus
ENSSMAG00000009156	-	71	85.818	ENSMPUG00000003168	MSI1	88	85.818	Mustela_putorius_furo
ENSSMAG00000009156	-	72	75.362	ENSMLUG00000010313	MSI1	100	75.177	Myotis_lucifugus
ENSSMAG00000009156	-	71	85.818	ENSNGAG00000014508	Msi1	91	85.818	Nannospalax_galili
ENSSMAG00000009156	-	78	90.909	ENSNBRG00000018012	MSI1	99	88.115	Neolamprologus_brichardi
ENSSMAG00000009156	-	73	91.584	ENSNBRG00000000841	-	94	93.103	Neolamprologus_brichardi
ENSSMAG00000009156	-	71	73.818	ENSNLEG00000015636	MSI1	82	73.818	Nomascus_leucogenys
ENSSMAG00000009156	-	70	72.161	ENSMEUG00000015759	MSI1	83	72.161	Notamacropus_eugenii
ENSSMAG00000009156	-	72	73.148	ENSOPRG00000016879	MSI1	99	76.336	Ochotona_princeps
ENSSMAG00000009156	-	71	85.818	ENSODEG00000006328	MSI1	99	85.818	Octodon_degus
ENSSMAG00000009156	-	73	91.584	ENSONIG00000011182	MSI1	94	93.103	Oreochromis_niloticus
ENSSMAG00000009156	-	73	90.278	ENSONIG00000019452	-	94	92.000	Oreochromis_niloticus
ENSSMAG00000009156	-	71	85.818	ENSOCUG00000027716	MSI1	88	85.818	Oryctolagus_cuniculus
ENSSMAG00000009156	-	72	97.030	ENSORLG00000029593	MSI1	94	97.318	Oryzias_latipes
ENSSMAG00000009156	-	73	91.133	ENSORLG00000019978	-	94	92.748	Oryzias_latipes
ENSSMAG00000009156	-	72	97.030	ENSORLG00020008266	MSI1	94	97.318	Oryzias_latipes_hni
ENSSMAG00000009156	-	73	91.133	ENSORLG00020001208	-	67	92.748	Oryzias_latipes_hni
ENSSMAG00000009156	-	72	97.030	ENSORLG00015003916	MSI1	94	97.318	Oryzias_latipes_hsok
ENSSMAG00000009156	-	73	91.133	ENSORLG00015013672	-	67	92.748	Oryzias_latipes_hsok
ENSSMAG00000009156	-	72	98.020	ENSOMEG00000002272	-	97	98.084	Oryzias_melastigma
ENSSMAG00000009156	-	73	91.133	ENSOMEG00000017536	MSI1	94	92.748	Oryzias_melastigma
ENSSMAG00000009156	-	71	84.892	ENSOGAG00000003847	MSI1	98	84.892	Otolemur_garnettii
ENSSMAG00000009156	-	71	82.609	ENSOARG00000012097	MSI1	100	82.609	Ovis_aries
ENSSMAG00000009156	-	71	85.818	ENSPPAG00000043073	MSI1	99	85.818	Pan_paniscus
ENSSMAG00000009156	-	71	85.818	ENSPPRG00000000370	MSI1	94	85.818	Panthera_pardus
ENSSMAG00000009156	-	71	85.818	ENSPTIG00000008913	MSI1	88	85.818	Panthera_tigris_altaica
ENSSMAG00000009156	-	71	85.818	ENSPTRG00000005531	MSI1	94	85.818	Pan_troglodytes
ENSSMAG00000009156	-	71	85.818	ENSPANG00000006335	MSI1	94	85.818	Papio_anubis
ENSSMAG00000009156	-	71	91.954	ENSPKIG00000023575	-	94	91.954	Paramormyrops_kingsleyae
ENSSMAG00000009156	-	74	93.596	ENSPKIG00000016497	MSI1	94	94.253	Paramormyrops_kingsleyae
ENSSMAG00000009156	-	72	81.395	ENSPSIG00000009621	-	100	82.456	Pelodiscus_sinensis
ENSSMAG00000009156	-	71	85.824	ENSPSIG00000011608	-	93	85.824	Pelodiscus_sinensis
ENSSMAG00000009156	-	71	73.384	ENSPMGG00000007743	-	91	73.384	Periophthalmus_magnuspinnatus
ENSSMAG00000009156	-	74	82.266	ENSPMGG00000000514	MSI1	97	85.081	Periophthalmus_magnuspinnatus
ENSSMAG00000009156	-	71	85.455	ENSPEMG00000010491	Msi1	93	85.455	Peromyscus_maniculatus_bairdii
ENSSMAG00000009156	-	73	97.030	ENSPFOG00000008319	-	81	97.318	Poecilia_formosa
ENSSMAG00000009156	-	73	91.133	ENSPFOG00000013113	MSI1	94	92.748	Poecilia_formosa
ENSSMAG00000009156	-	73	91.133	ENSPLAG00000014025	-	94	92.748	Poecilia_latipinna
ENSSMAG00000009156	-	73	97.030	ENSPLAG00000012431	-	91	97.318	Poecilia_latipinna
ENSSMAG00000009156	-	73	91.133	ENSPMEG00000012796	MSI1	94	92.748	Poecilia_mexicana
ENSSMAG00000009156	-	73	96.040	ENSPMEG00000007025	-	93	83.908	Poecilia_mexicana
ENSSMAG00000009156	-	81	89.427	ENSPREG00000021416	-	94	90.421	Poecilia_reticulata
ENSSMAG00000009156	-	70	78.365	ENSPREG00000014574	-	100	79.638	Poecilia_reticulata
ENSSMAG00000009156	-	71	85.818	ENSPPYG00000005027	MSI1	94	85.818	Pongo_abelii
ENSSMAG00000009156	-	53	90.355	ENSPCAG00000002300	MSI1	72	90.355	Procavia_capensis
ENSSMAG00000009156	-	71	85.818	ENSPCOG00000017341	MSI1	94	85.818	Propithecus_coquereli
ENSSMAG00000009156	-	71	66.545	ENSPVAG00000002225	MSI1	99	66.545	Pteropus_vampyrus
ENSSMAG00000009156	-	73	96.059	ENSPNYG00000004379	MSI1	94	96.565	Pundamilia_nyererei
ENSSMAG00000009156	-	73	91.584	ENSPNYG00000002529	-	94	93.103	Pundamilia_nyererei
ENSSMAG00000009156	-	71	89.313	ENSPNAG00000019337	msi1	94	89.313	Pygocentrus_nattereri
ENSSMAG00000009156	-	71	85.455	ENSRNOG00000001156	Msi1	88	85.455	Rattus_norvegicus
ENSSMAG00000009156	-	71	85.818	ENSRBIG00000036889	MSI1	96	85.818	Rhinopithecus_bieti
ENSSMAG00000009156	-	71	85.818	ENSRROG00000041076	MSI1	93	85.818	Rhinopithecus_roxellana
ENSSMAG00000009156	-	71	85.818	ENSSBOG00000030259	MSI1	99	85.818	Saimiri_boliviensis_boliviensis
ENSSMAG00000009156	-	71	74.101	ENSSHAG00000006834	MSI1	91	74.101	Sarcophilus_harrisii
ENSSMAG00000009156	-	71	92.424	ENSSFOG00015005350	MSI1	96	92.424	Scleropages_formosus
ENSSMAG00000009156	-	73	94.554	ENSSFOG00015014964	-	95	95.402	Scleropages_formosus
ENSSMAG00000009156	-	73	97.525	ENSSDUG00000022697	-	94	97.701	Seriola_dumerili
ENSSMAG00000009156	-	73	91.133	ENSSDUG00000001027	MSI1	94	92.748	Seriola_dumerili
ENSSMAG00000009156	-	71	86.182	ENSSLDG00000018706	-	99	86.182	Seriola_lalandi_dorsalis
ENSSMAG00000009156	-	73	91.133	ENSSLDG00000016832	MSI1	94	92.748	Seriola_lalandi_dorsalis
ENSSMAG00000009156	-	71	89.394	ENSSPUG00000015741	MSI1	100	89.394	Sphenodon_punctatus
ENSSMAG00000009156	-	73	97.537	ENSSPAG00000013098	-	100	97.710	Stegastes_partitus
ENSSMAG00000009156	-	70	72.081	ENSSPAG00000014085	-	100	73.810	Stegastes_partitus
ENSSMAG00000009156	-	71	85.455	ENSSSCG00000029365	MSI1	94	85.455	Sus_scrofa
ENSSMAG00000009156	-	71	86.447	ENSTGUG00000009534	MSI1	100	86.447	Taeniopygia_guttata
ENSSMAG00000009156	-	72	90.594	ENSTRUG00000016249	MSI1	100	81.818	Takifugu_rubripes
ENSSMAG00000009156	-	71	81.992	ENSTRUG00000015636	-	79	81.992	Takifugu_rubripes
ENSSMAG00000009156	-	71	65.789	ENSTNIG00000019814	-	94	65.789	Tetraodon_nigroviridis
ENSSMAG00000009156	-	73	84.653	ENSTNIG00000011469	MSI1	94	86.364	Tetraodon_nigroviridis
ENSSMAG00000009156	-	70	77.289	ENSTBEG00000007182	MSI1	100	77.289	Tupaia_belangeri
ENSSMAG00000009156	-	54	89.447	ENSTTRG00000005663	MSI1	78	89.447	Tursiops_truncatus
ENSSMAG00000009156	-	71	83.273	ENSUMAG00000006176	MSI1	78	83.273	Ursus_maritimus
ENSSMAG00000009156	-	71	85.818	ENSVVUG00000020993	MSI1	100	85.818	Vulpes_vulpes
ENSSMAG00000009156	-	71	85.824	ENSXETG00000012216	msi1	94	85.824	Xenopus_tropicalis
ENSSMAG00000009156	-	79	81.900	ENSXCOG00000017605	MSI1	80	88.018	Xiphophorus_couchianus
ENSSMAG00000009156	-	73	96.535	ENSXMAG00000018237	-	94	96.935	Xiphophorus_maculatus
ENSSMAG00000009156	-	73	92.079	ENSXMAG00000027103	MSI1	89	82.707	Xiphophorus_maculatus