EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000009283 (Gene tree)
Gene ID: -
Gene Symbol: alyref
Alias: tho4|thoc4|zgc:171753
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 3700 bases
Position: chr19:8479744-8483443
Accession: ZDB-GENE-070928-29
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015161	RRM_1	PF00076.22	1.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015355	-	1870	-	ENSSMAP00000015161	273 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009283's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009283's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000009283	alyref	100	50.530	ENSSMAG00000011169	-	100	55.721

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009283	alyref	100	54.152	ENSAPOG00000000183	-	100	53.791	Acanthochromis_polyacanthus
ENSSMAG00000009283	alyref	100	52.265	ENSACIG00000020351	-	100	52.778	Amphilophus_citrinellus
ENSSMAG00000009283	alyref	99	79.779	ENSACIG00000006351	alyref	98	82.847	Amphilophus_citrinellus
ENSSMAG00000009283	alyref	100	80.727	ENSAOCG00000014012	alyref	100	85.091	Amphiprion_ocellaris
ENSSMAG00000009283	alyref	100	53.791	ENSAOCG00000019305	-	100	53.430	Amphiprion_ocellaris
ENSSMAG00000009283	alyref	100	54.874	ENSAPEG00000013527	-	100	53.430	Amphiprion_percula
ENSSMAG00000009283	alyref	100	80.727	ENSAPEG00000014603	alyref	100	85.091	Amphiprion_percula
ENSSMAG00000009283	alyref	100	57.857	ENSATEG00000000382	-	100	53.597	Anabas_testudineus
ENSSMAG00000009283	alyref	100	76.344	ENSATEG00000004307	alyref	100	78.853	Anabas_testudineus
ENSSMAG00000009283	alyref	50	71.942	ENSAPLG00000014745	-	100	70.504	Anas_platyrhynchos
ENSSMAG00000009283	alyref	100	85.145	ENSACLG00000008432	alyref	100	82.609	Astatotilapia_calliptera
ENSSMAG00000009283	alyref	100	55.830	ENSACLG00000010184	-	100	55.124	Astatotilapia_calliptera
ENSSMAG00000009283	alyref	100	73.929	ENSAMXG00000007359	alyref	100	75.714	Astyanax_mexicanus
ENSSMAG00000009283	alyref	99	45.936	ENSCING00000013568	-	99	44.912	Ciona_intestinalis
ENSSMAG00000009283	alyref	99	44.727	ENSCSAVG00000003324	-	99	42.336	Ciona_savignyi
ENSSMAG00000009283	alyref	100	80.364	ENSCSEG00000017800	alyref	100	79.636	Cynoglossus_semilaevis
ENSSMAG00000009283	alyref	100	47.273	ENSCVAG00000007789	-	100	45.878	Cyprinodon_variegatus
ENSSMAG00000009283	alyref	100	82.847	ENSCVAG00000014869	alyref	100	78.832	Cyprinodon_variegatus
ENSSMAG00000009283	alyref	100	76.678	ENSDARG00000077732	alyref	100	73.310	Danio_rerio
ENSSMAG00000009283	alyref	71	46.766	ENSEBUG00000006305	alyref	100	38.163	Eptatretus_burgeri
ENSSMAG00000009283	alyref	99	50.741	ENSEBUG00000008253	alyref	95	49.259	Eptatretus_burgeri
ENSSMAG00000009283	alyref	100	76.277	ENSELUG00000017178	alyref	100	69.455	Esox_lucius
ENSSMAG00000009283	alyref	100	64.894	ENSELUG00000008849	-	100	63.475	Esox_lucius
ENSSMAG00000009283	alyref	58	78.395	ENSFALG00000011923	-	94	74.342	Ficedula_albicollis
ENSSMAG00000009283	alyref	100	49.822	ENSFHEG00000004698	-	100	48.014	Fundulus_heteroclitus
ENSSMAG00000009283	alyref	100	79.927	ENSFHEG00000019426	alyref	100	79.562	Fundulus_heteroclitus
ENSSMAG00000009283	alyref	68	60.000	ENSGMOG00000013122	-	100	60.733	Gadus_morhua
ENSSMAG00000009283	alyref	100	71.636	ENSGMOG00000009882	alyref	100	69.091	Gadus_morhua
ENSSMAG00000009283	alyref	100	80.364	ENSGAFG00000006014	alyref	100	76.364	Gambusia_affinis
ENSSMAG00000009283	alyref	100	48.746	ENSGAFG00000007573	-	100	46.209	Gambusia_affinis
ENSSMAG00000009283	alyref	100	56.140	ENSHBUG00000001454	-	100	56.184	Haplochromis_burtoni
ENSSMAG00000009283	alyref	100	85.145	ENSHBUG00000020196	alyref	100	82.609	Haplochromis_burtoni
ENSSMAG00000009283	alyref	98	48.529	ENSHCOG00000012825	-	94	47.407	Hippocampus_comes
ENSSMAG00000009283	alyref	100	75.451	ENSIPUG00000009469	alyref	100	72.202	Ictalurus_punctatus
ENSSMAG00000009283	alyref	73	64.677	ENSSTOG00000016570	-	92	61.257	Ictidomys_tridecemlineatus
ENSSMAG00000009283	alyref	100	80.364	ENSKMAG00000008912	alyref	100	81.091	Kryptolebias_marmoratus
ENSSMAG00000009283	alyref	99	52.768	ENSKMAG00000006462	-	98	50.185	Kryptolebias_marmoratus
ENSSMAG00000009283	alyref	99	49.104	ENSLBEG00000012930	-	99	46.350	Labrus_bergylta
ENSSMAG00000009283	alyref	100	49.831	ENSLBEG00000005387	-	66	54.500	Labrus_bergylta
ENSSMAG00000009283	alyref	99	85.714	ENSLBEG00000023118	alyref	90	86.232	Labrus_bergylta
ENSSMAG00000009283	alyref	77	73.023	ENSLOCG00000013879	alyref	89	73.488	Lepisosteus_oculatus
ENSSMAG00000009283	alyref	100	51.264	ENSMAMG00000005464	-	100	51.264	Mastacembelus_armatus
ENSSMAG00000009283	alyref	100	81.522	ENSMAMG00000003034	alyref	100	84.058	Mastacembelus_armatus
ENSSMAG00000009283	alyref	100	85.145	ENSMZEG00005008639	alyref	100	82.609	Maylandia_zebra
ENSSMAG00000009283	alyref	100	55.477	ENSMZEG00005012096	-	100	54.770	Maylandia_zebra
ENSSMAG00000009283	alyref	99	81.919	ENSMMOG00000012458	alyref	96	79.705	Mola_mola
ENSSMAG00000009283	alyref	99	47.794	ENSMMOG00000007032	-	98	44.755	Mola_mola
ENSSMAG00000009283	alyref	100	51.930	ENSMALG00000006054	-	100	51.418	Monopterus_albus
ENSSMAG00000009283	alyref	100	56.140	ENSMLUG00000006521	-	100	56.028	Myotis_lucifugus
ENSSMAG00000009283	alyref	98	54.579	ENSMLUG00000009247	-	98	50.916	Myotis_lucifugus
ENSSMAG00000009283	alyref	100	60.219	ENSMLUG00000004098	-	100	55.319	Myotis_lucifugus
ENSSMAG00000009283	alyref	98	55.944	ENSMLUG00000022467	-	98	52.158	Myotis_lucifugus
ENSSMAG00000009283	alyref	100	57.857	ENSMLUG00000014372	-	100	56.028	Myotis_lucifugus
ENSSMAG00000009283	alyref	98	57.299	ENSMLUG00000022178	-	98	52.045	Myotis_lucifugus
ENSSMAG00000009283	alyref	98	55.596	ENSMLUG00000028605	-	98	53.986	Myotis_lucifugus
ENSSMAG00000009283	alyref	98	58.394	ENSMLUG00000030671	-	99	53.237	Myotis_lucifugus
ENSSMAG00000009283	alyref	100	69.963	ENSNGAG00000022014	-	100	62.774	Nannospalax_galili
ENSSMAG00000009283	alyref	100	86.232	ENSNBRG00000001747	alyref	100	82.971	Neolamprologus_brichardi
ENSSMAG00000009283	alyref	100	56.584	ENSNBRG00000017460	-	100	55.516	Neolamprologus_brichardi
ENSSMAG00000009283	alyref	100	57.554	ENSONIG00000003296	-	100	58.423	Oreochromis_niloticus
ENSSMAG00000009283	alyref	100	80.287	ENSONIG00000019434	alyref	100	79.928	Oreochromis_niloticus
ENSSMAG00000009283	alyref	99	40.952	ENSORLG00000001620	-	58	46.977	Oryzias_latipes
ENSSMAG00000009283	alyref	100	86.131	ENSORLG00020011942	alyref	100	81.752	Oryzias_latipes_hni
ENSSMAG00000009283	alyref	99	49.455	ENSORLG00020015673	-	100	47.842	Oryzias_latipes_hni
ENSSMAG00000009283	alyref	99	49.097	ENSORLG00015015143	-	100	44.746	Oryzias_latipes_hsok
ENSSMAG00000009283	alyref	100	82.117	ENSORLG00015022664	alyref	100	81.752	Oryzias_latipes_hsok
ENSSMAG00000009283	alyref	99	50.730	ENSOMEG00000007158	-	97	45.421	Oryzias_melastigma
ENSSMAG00000009283	alyref	100	85.036	ENSOMEG00000019176	alyref	100	81.022	Oryzias_melastigma
ENSSMAG00000009283	alyref	70	76.842	ENSPPAG00000036403	-	69	69.474	Pan_paniscus
ENSSMAG00000009283	alyref	100	72.628	ENSPKIG00000007070	alyref	100	69.343	Paramormyrops_kingsleyae
ENSSMAG00000009283	alyref	99	70.696	ENSPKIG00000006233	-	80	64.469	Paramormyrops_kingsleyae
ENSSMAG00000009283	alyref	99	77.206	ENSPMGG00000016600	alyref	91	77.656	Periophthalmus_magnuspinnatus
ENSSMAG00000009283	alyref	72	48.223	ENSPMGG00000012994	-	97	46.000	Periophthalmus_magnuspinnatus
ENSSMAG00000009283	alyref	100	63.736	ENSPEMG00000016628	-	100	58.242	Peromyscus_maniculatus_bairdii
ENSSMAG00000009283	alyref	100	79.348	ENSPFOG00000022825	alyref	99	80.072	Poecilia_formosa
ENSSMAG00000009283	alyref	100	48.582	ENSPFOG00000017094	-	100	46.570	Poecilia_formosa
ENSSMAG00000009283	alyref	100	79.273	ENSPLAG00000006948	alyref	100	80.727	Poecilia_latipinna
ENSSMAG00000009283	alyref	100	48.582	ENSPLAG00000014380	-	100	46.570	Poecilia_latipinna
ENSSMAG00000009283	alyref	100	79.348	ENSPMEG00000003547	alyref	100	80.072	Poecilia_mexicana
ENSSMAG00000009283	alyref	100	48.582	ENSPMEG00000023039	-	100	46.570	Poecilia_mexicana
ENSSMAG00000009283	alyref	100	50.000	ENSPREG00000003649	-	100	47.273	Poecilia_reticulata
ENSSMAG00000009283	alyref	100	79.636	ENSPREG00000015795	alyref	100	81.818	Poecilia_reticulata
ENSSMAG00000009283	alyref	100	85.145	ENSPNYG00000017498	alyref	100	82.609	Pundamilia_nyererei
ENSSMAG00000009283	alyref	99	54.513	ENSPNYG00000002879	-	98	54.676	Pundamilia_nyererei
ENSSMAG00000009283	alyref	100	75.273	ENSPNAG00000002531	alyref	100	71.273	Pygocentrus_nattereri
ENSSMAG00000009283	alyref	82	70.089	ENSSBOG00000030924	-	87	68.367	Saimiri_boliviensis_boliviensis
ENSSMAG00000009283	alyref	99	56.584	ENSSHAG00000000609	-	99	54.212	Sarcophilus_harrisii
ENSSMAG00000009283	alyref	99	55.396	ENSSHAG00000012866	-	99	53.480	Sarcophilus_harrisii
ENSSMAG00000009283	alyref	69	78.307	ENSSFOG00015003678	alyref	83	69.841	Scleropages_formosus
ENSSMAG00000009283	alyref	77	79.621	ENSSFOG00015003923	alyref	73	72.038	Scleropages_formosus
ENSSMAG00000009283	alyref	100	81.818	ENSSDUG00000016158	alyref	100	86.182	Seriola_dumerili
ENSSMAG00000009283	alyref	100	80.797	ENSSLDG00000017803	alyref	100	85.507	Seriola_lalandi_dorsalis
ENSSMAG00000009283	alyref	99	55.109	ENSSPAG00000017028	-	96	55.839	Stegastes_partitus
ENSSMAG00000009283	alyref	100	50.000	ENSTRUG00000003051	-	100	48.571	Takifugu_rubripes
ENSSMAG00000009283	alyref	100	73.741	ENSTNIG00000011595	alyref	100	72.563	Tetraodon_nigroviridis
ENSSMAG00000009283	alyref	100	51.264	ENSTNIG00000014136	-	100	44.203	Tetraodon_nigroviridis
ENSSMAG00000009283	alyref	70	77.487	ENSVVUG00000000272	-	82	70.000	Vulpes_vulpes
ENSSMAG00000009283	alyref	99	79.779	ENSXCOG00000018047	alyref	98	75.735	Xiphophorus_couchianus
ENSSMAG00000009283	alyref	99	79.779	ENSXMAG00000012218	alyref	98	75.735	Xiphophorus_maculatus
ENSSMAG00000009283	alyref	100	49.643	ENSXMAG00000018086	-	100	47.653	Xiphophorus_maculatus