EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000009316 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 10160 bases
Position: chr12:14777914-14788073
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015220	RRM_5	PF13893.6	1.4e-06	1	1
ENSSMAP00000015220	RRM_1	PF00076.22	5e-13	1	1
ENSSMAP00000015220	SAP	PF02037.27	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015415	-	5547	-	ENSSMAP00000015220	835 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009316's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009316	safb	66	42.381	ENSG00000160633	SAFB	78	60.656	Homo_sapiens
ENSSMAG00000009316	safb	100	83.871	ENSAPOG00000022508	safb	100	84.110	Acanthochromis_polyacanthus
ENSSMAG00000009316	safb	66	43.018	ENSAMEG00000012254	SAFB	98	40.598	Ailuropoda_melanoleuca
ENSSMAG00000009316	safb	100	75.627	ENSACIG00000006247	safb	100	75.121	Amphilophus_citrinellus
ENSSMAG00000009316	safb	95	83.019	ENSAOCG00000006308	safb	99	83.019	Amphiprion_ocellaris
ENSSMAG00000009316	safb	100	83.274	ENSAPEG00000023342	safb	100	83.274	Amphiprion_percula
ENSSMAG00000009316	safb	100	85.340	ENSATEG00000004998	safb	100	84.982	Anabas_testudineus
ENSSMAG00000009316	safb	59	46.182	ENSAPLG00000006355	-	100	47.775	Anas_platyrhynchos
ENSSMAG00000009316	safb	60	41.493	ENSAPLG00000005780	-	98	44.619	Anas_platyrhynchos
ENSSMAG00000009316	safb	66	43.520	ENSANAG00000028821	SAFB	95	41.349	Aotus_nancymaae
ENSSMAG00000009316	safb	100	79.570	ENSACLG00000001926	safb	100	79.570	Astatotilapia_calliptera
ENSSMAG00000009316	safb	98	62.427	ENSAMXG00000018154	safb	100	59.910	Astyanax_mexicanus
ENSSMAG00000009316	safb	98	42.889	ENSBTAG00000007875	SAFB	93	41.096	Bos_taurus
ENSSMAG00000009316	safb	66	42.013	ENSCAFG00000018803	SAFB	84	39.915	Canis_familiaris
ENSSMAG00000009316	safb	66	42.013	ENSCAFG00020018943	SAFB	97	39.915	Canis_lupus_dingo
ENSSMAG00000009316	safb	98	42.889	ENSCHIG00000007262	SAFB	93	41.096	Capra_hircus
ENSSMAG00000009316	safb	66	44.337	ENSCCAG00000020193	SAFB	95	41.758	Cebus_capucinus
ENSSMAG00000009316	safb	66	42.448	ENSCATG00000029994	SAFB	95	40.998	Cercocebus_atys
ENSSMAG00000009316	safb	64	41.627	ENSCLAG00000007734	SAFB	96	42.553	Chinchilla_lanigera
ENSSMAG00000009316	safb	66	42.448	ENSCSAG00000009949	SAFB	95	40.998	Chlorocebus_sabaeus
ENSSMAG00000009316	safb	52	35.306	ENSCHOG00000003208	SAFB	87	35.741	Choloepus_hoffmanni
ENSSMAG00000009316	safb	91	45.768	ENSCPBG00000010936	-	97	44.855	Chrysemys_picta_bellii
ENSSMAG00000009316	safb	90	42.227	ENSCPBG00000010928	-	97	43.326	Chrysemys_picta_bellii
ENSSMAG00000009316	safb	98	40.741	ENSCANG00000019754	-	93	40.180	Colobus_angolensis_palliatus
ENSSMAG00000009316	safb	83	42.577	ENSCANG00000004774	-	93	43.279	Colobus_angolensis_palliatus
ENSSMAG00000009316	safb	64	42.994	ENSCGRG00001002254	Safb	95	40.595	Cricetulus_griseus_chok1gshd
ENSSMAG00000009316	safb	56	39.033	ENSCGRG00000011529	Safb	94	37.681	Cricetulus_griseus_crigri
ENSSMAG00000009316	safb	65	68.646	ENSCSEG00000019870	safb	100	68.720	Cynoglossus_semilaevis
ENSSMAG00000009316	safb	100	64.916	ENSCVAG00000002226	safb	100	65.394	Cyprinodon_variegatus
ENSSMAG00000009316	safb	96	61.629	ENSDARG00000020467	safb	98	62.171	Danio_rerio
ENSSMAG00000009316	safb	66	42.400	ENSDNOG00000015746	SAFB	95	39.856	Dasypus_novemcinctus
ENSSMAG00000009316	safb	64	43.729	ENSEASG00005023019	SAFB	97	41.987	Equus_asinus_asinus
ENSSMAG00000009316	safb	64	43.781	ENSECAG00000018659	SAFB	87	41.031	Equus_caballus
ENSSMAG00000009316	safb	99	64.713	ENSELUG00000022327	safb	99	64.948	Esox_lucius
ENSSMAG00000009316	safb	66	42.607	ENSFCAG00000011835	SAFB	97	40.085	Felis_catus
ENSSMAG00000009316	safb	64	44.444	ENSFALG00000013882	-	87	45.151	Ficedula_albicollis
ENSSMAG00000009316	safb	100	67.981	ENSFHEG00000004219	safb	100	68.817	Fundulus_heteroclitus
ENSSMAG00000009316	safb	100	68.014	ENSGMOG00000014280	safb	100	69.084	Gadus_morhua
ENSSMAG00000009316	safb	64	42.968	ENSGALG00000001948	-	97	44.705	Gallus_gallus
ENSSMAG00000009316	safb	66	43.922	ENSGALG00000013365	-	97	45.123	Gallus_gallus
ENSSMAG00000009316	safb	100	65.711	ENSGAFG00000016162	safb	100	64.564	Gambusia_affinis
ENSSMAG00000009316	safb	100	78.723	ENSGACG00000011385	safb	100	78.723	Gasterosteus_aculeatus
ENSSMAG00000009316	safb	66	49.917	ENSGAGG00000017702	-	88	52.349	Gopherus_agassizii
ENSSMAG00000009316	safb	94	48.482	ENSGAGG00000008424	-	98	47.294	Gopherus_agassizii
ENSSMAG00000009316	safb	66	43.016	ENSGGOG00000015109	SAFB	95	40.845	Gorilla_gorilla
ENSSMAG00000009316	safb	100	70.215	ENSHBUG00000009218	safb	100	72.673	Haplochromis_burtoni
ENSSMAG00000009316	safb	94	65.355	ENSHCOG00000001705	safb	99	64.892	Hippocampus_comes
ENSSMAG00000009316	safb	99	63.498	ENSIPUG00000024869	safb2	99	64.111	Ictalurus_punctatus
ENSSMAG00000009316	safb	60	40.339	ENSSTOG00000002783	SAFB	98	38.914	Ictidomys_tridecemlineatus
ENSSMAG00000009316	safb	64	41.987	ENSJJAG00000009021	Safb	96	39.471	Jaculus_jaculus
ENSSMAG00000009316	safb	100	76.520	ENSKMAG00000022308	safb	100	76.639	Kryptolebias_marmoratus
ENSSMAG00000009316	safb	100	82.151	ENSLBEG00000006015	safb	100	81.915	Labrus_bergylta
ENSSMAG00000009316	safb	65	43.131	ENSLACG00000018090	SAFB	98	47.147	Latimeria_chalumnae
ENSSMAG00000009316	safb	98	63.972	ENSLOCG00000003613	safb	99	63.972	Lepisosteus_oculatus
ENSSMAG00000009316	safb	98	41.631	ENSLAFG00000003840	SAFB	96	41.453	Loxodonta_africana
ENSSMAG00000009316	safb	66	42.222	ENSMFAG00000003885	SAFB	95	40.889	Macaca_fascicularis
ENSSMAG00000009316	safb	66	43.019	ENSMMUG00000017970	SAFB	95	41.302	Macaca_mulatta
ENSSMAG00000009316	safb	66	40.741	ENSMNEG00000035637	SAFB	95	39.869	Macaca_nemestrina
ENSSMAG00000009316	safb	65	39.583	ENSMLEG00000038637	SAFB	95	39.364	Mandrillus_leucophaeus
ENSSMAG00000009316	safb	100	85.305	ENSMAMG00000003357	safb	91	83.751	Mastacembelus_armatus
ENSSMAG00000009316	safb	100	82.542	ENSMZEG00005009120	safb	100	82.542	Maylandia_zebra
ENSSMAG00000009316	safb	64	40.796	ENSMGAG00000001101	-	98	43.370	Meleagris_gallopavo
ENSSMAG00000009316	safb	66	42.811	ENSMICG00000008739	-	97	41.398	Microcebus_murinus
ENSSMAG00000009316	safb	86	37.690	ENSMICG00000046795	-	95	39.363	Microcebus_murinus
ENSSMAG00000009316	safb	98	42.375	ENSMODG00000001236	SAFB	95	40.885	Monodelphis_domestica
ENSSMAG00000009316	safb	100	81.861	ENSMALG00000020330	safb	100	80.801	Monopterus_albus
ENSSMAG00000009316	safb	64	42.654	ENSMUSG00000071054	Safb	94	40.713	Mus_musculus
ENSSMAG00000009316	safb	63	42.381	MGP_PahariEiJ_G0020769	Safb	94	40.669	Mus_pahari
ENSSMAG00000009316	safb	66	42.468	ENSMPUG00000006123	SAFB	91	40.192	Mustela_putorius_furo
ENSSMAG00000009316	safb	98	42.162	ENSMLUG00000001081	SAFB	95	40.043	Myotis_lucifugus
ENSSMAG00000009316	safb	66	42.381	ENSNLEG00000013551	SAFB	97	40.914	Nomascus_leucogenys
ENSSMAG00000009316	safb	59	40.248	ENSOPRG00000011561	-	99	38.061	Ochotona_princeps
ENSSMAG00000009316	safb	100	81.851	ENSONIG00000002318	safb	100	81.851	Oreochromis_niloticus
ENSSMAG00000009316	safb	89	40.482	ENSOCUG00000014628	SAFB	62	43.182	Oryctolagus_cuniculus
ENSSMAG00000009316	safb	98	74.241	ENSORLG00000016989	safb	100	73.872	Oryzias_latipes
ENSSMAG00000009316	safb	67	68.941	ENSORLG00020000404	safb	100	66.825	Oryzias_latipes_hni
ENSSMAG00000009316	safb	98	75.091	ENSORLG00015010733	safb	100	74.524	Oryzias_latipes_hsok
ENSSMAG00000009316	safb	100	73.810	ENSOMEG00000009066	safb	100	73.333	Oryzias_melastigma
ENSSMAG00000009316	safb	64	42.881	ENSOGAG00000027769	SAFB	97	40.992	Otolemur_garnettii
ENSSMAG00000009316	safb	98	39.623	ENSOARG00000007662	-	93	39.681	Ovis_aries
ENSSMAG00000009316	safb	81	38.667	ENSOARG00000007856	-	100	37.816	Ovis_aries
ENSSMAG00000009316	safb	66	42.788	ENSPPAG00000035129	SAFB	95	40.628	Pan_paniscus
ENSSMAG00000009316	safb	66	42.607	ENSPPRG00000017197	SAFB	97	40.085	Panthera_pardus
ENSSMAG00000009316	safb	66	42.662	ENSPTRG00000010335	SAFB	95	40.628	Pan_troglodytes
ENSSMAG00000009316	safb	66	42.321	ENSPANG00000007770	SAFB	95	40.889	Papio_anubis
ENSSMAG00000009316	safb	99	64.018	ENSPKIG00000009902	safb	99	64.619	Paramormyrops_kingsleyae
ENSSMAG00000009316	safb	98	45.659	ENSPSIG00000009367	-	96	45.601	Pelodiscus_sinensis
ENSSMAG00000009316	safb	98	47.436	ENSPSIG00000011679	-	98	46.858	Pelodiscus_sinensis
ENSSMAG00000009316	safb	100	68.246	ENSPFOG00000007745	safb	100	67.180	Poecilia_formosa
ENSSMAG00000009316	safb	100	64.619	ENSPLAG00000001614	safb	100	64.432	Poecilia_latipinna
ENSSMAG00000009316	safb	100	68.009	ENSPMEG00000021023	safb	100	66.943	Poecilia_mexicana
ENSSMAG00000009316	safb	100	66.161	ENSPREG00000012496	safb	100	65.734	Poecilia_reticulata
ENSSMAG00000009316	safb	66	42.381	ENSPPYG00000009428	SAFB	95	40.825	Pongo_abelii
ENSSMAG00000009316	safb	64	39.044	ENSPCAG00000006475	SAFB	95	38.462	Procavia_capensis
ENSSMAG00000009316	safb	98	40.773	ENSPCOG00000014090	SAFB	97	40.514	Propithecus_coquereli
ENSSMAG00000009316	safb	98	40.111	ENSPVAG00000004913	SAFB	97	37.164	Pteropus_vampyrus
ENSSMAG00000009316	safb	99	63.552	ENSPNAG00000021838	safb	99	64.815	Pygocentrus_nattereri
ENSSMAG00000009316	safb	66	41.186	ENSRBIG00000042509	SAFB	95	39.747	Rhinopithecus_bieti
ENSSMAG00000009316	safb	66	42.155	ENSRROG00000029278	SAFB	95	41.062	Rhinopithecus_roxellana
ENSSMAG00000009316	safb	66	44.391	ENSSBOG00000026291	SAFB	95	41.767	Saimiri_boliviensis_boliviensis
ENSSMAG00000009316	safb	99	64.719	ENSSFOG00015008156	safb	99	65.098	Scleropages_formosus
ENSSMAG00000009316	safb	100	83.353	ENSSDUG00000009652	safb	100	83.353	Seriola_dumerili
ENSSMAG00000009316	safb	100	88.862	ENSSLDG00000001670	safb	100	88.862	Seriola_lalandi_dorsalis
ENSSMAG00000009316	safb	60	41.549	ENSSARG00000010475	SAFB	98	38.182	Sorex_araneus
ENSSMAG00000009316	safb	56	41.603	ENSSPUG00000009747	-	99	40.781	Sphenodon_punctatus
ENSSMAG00000009316	safb	51	42.938	ENSSPUG00000009820	-	98	47.066	Sphenodon_punctatus
ENSSMAG00000009316	safb	99	74.758	ENSSPAG00000015682	safb	99	73.913	Stegastes_partitus
ENSSMAG00000009316	safb	64	43.140	ENSSSCG00000013522	SAFB	96	42.462	Sus_scrofa
ENSSMAG00000009316	safb	64	45.108	ENSTGUG00000000502	-	97	46.377	Taeniopygia_guttata
ENSSMAG00000009316	safb	63	46.269	ENSTGUG00000000489	-	96	48.848	Taeniopygia_guttata
ENSSMAG00000009316	safb	100	77.327	ENSTRUG00000003567	safb	100	75.776	Takifugu_rubripes
ENSSMAG00000009316	safb	91	63.570	ENSTNIG00000015470	safb	100	63.581	Tetraodon_nigroviridis
ENSSMAG00000009316	safb	84	75.000	ENSTTRG00000013588	SAFB	85	75.000	Tursiops_truncatus
ENSSMAG00000009316	safb	73	42.450	ENSUMAG00000009734	SAFB	85	43.000	Ursus_maritimus
ENSSMAG00000009316	safb	66	42.173	ENSVVUG00000013720	SAFB	84	40.043	Vulpes_vulpes
ENSSMAG00000009316	safb	100	68.839	ENSXMAG00000003458	safb	100	67.773	Xiphophorus_maculatus