EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000009458 (Gene tree)
Gene ID: -
Gene Symbol: lsm8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 978 bases
Position: chr2:23185992-23186969
Accession: ZDB-GENE-070629-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015433	LSM	PF01423.22	1.5e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015629	-	228	-	ENSSMAP00000015433	75 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009458's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009458	lsm8	100	97.333	ENSG00000128534	LSM8	100	97.333	Homo_sapiens
ENSSMAG00000009458	lsm8	100	97.333	ENSAPOG00000008649	lsm8	78	97.333	Acanthochromis_polyacanthus
ENSSMAG00000009458	lsm8	100	97.333	ENSAMEG00000001162	LSM8	78	97.333	Ailuropoda_melanoleuca
ENSSMAG00000009458	lsm8	100	97.333	ENSACIG00000014694	lsm8	100	97.333	Amphilophus_citrinellus
ENSSMAG00000009458	lsm8	100	97.333	ENSAOCG00000013926	lsm8	78	97.333	Amphiprion_ocellaris
ENSSMAG00000009458	lsm8	100	97.333	ENSAPEG00000023502	lsm8	78	97.333	Amphiprion_percula
ENSSMAG00000009458	lsm8	100	97.333	ENSATEG00000023432	lsm8	100	97.333	Anabas_testudineus
ENSSMAG00000009458	lsm8	100	96.000	ENSAPLG00000005115	LSM8	76	96.000	Anas_platyrhynchos
ENSSMAG00000009458	lsm8	100	97.333	ENSANAG00000027771	LSM8	100	94.595	Aotus_nancymaae
ENSSMAG00000009458	lsm8	100	97.333	ENSACLG00000011253	lsm8	78	97.333	Astatotilapia_calliptera
ENSSMAG00000009458	lsm8	100	96.000	ENSAMXG00000042902	lsm8	78	96.000	Astyanax_mexicanus
ENSSMAG00000009458	lsm8	100	97.333	ENSBTAG00000012649	LSM8	78	97.333	Bos_taurus
ENSSMAG00000009458	lsm8	97	56.164	WBGene00003082	lsm-8	74	56.164	Caenorhabditis_elegans
ENSSMAG00000009458	lsm8	100	97.333	ENSCJAG00000046406	LSM8	100	94.595	Callithrix_jacchus
ENSSMAG00000009458	lsm8	99	97.297	ENSCAFG00000016459	LSM8	75	97.297	Canis_familiaris
ENSSMAG00000009458	lsm8	100	82.667	ENSCAFG00020012800	-	59	82.667	Canis_lupus_dingo
ENSSMAG00000009458	lsm8	100	97.333	ENSCAFG00020007643	-	78	97.333	Canis_lupus_dingo
ENSSMAG00000009458	lsm8	100	97.333	ENSCHIG00000014201	LSM8	80	97.333	Capra_hircus
ENSSMAG00000009458	lsm8	100	97.333	ENSTSYG00000032434	LSM8	78	97.333	Carlito_syrichta
ENSSMAG00000009458	lsm8	99	95.946	ENSCAPG00000008253	LSM8	100	95.946	Cavia_aperea
ENSSMAG00000009458	lsm8	100	97.333	ENSCPOG00000035673	LSM8	78	97.333	Cavia_porcellus
ENSSMAG00000009458	lsm8	100	97.333	ENSCCAG00000021329	LSM8	100	94.595	Cebus_capucinus
ENSSMAG00000009458	lsm8	100	97.333	ENSCATG00000045302	LSM8	100	94.595	Cercocebus_atys
ENSSMAG00000009458	lsm8	100	97.333	ENSCLAG00000003726	LSM8	78	97.333	Chinchilla_lanigera
ENSSMAG00000009458	lsm8	100	96.000	ENSCSAG00000019007	-	78	96.000	Chlorocebus_sabaeus
ENSSMAG00000009458	lsm8	100	97.333	ENSCSAG00000010802	-	78	97.333	Chlorocebus_sabaeus
ENSSMAG00000009458	lsm8	100	97.333	ENSCPBG00000008154	LSM8	77	97.333	Chrysemys_picta_bellii
ENSSMAG00000009458	lsm8	100	78.667	ENSCING00000024877	-	78	78.667	Ciona_intestinalis
ENSSMAG00000009458	lsm8	100	97.333	ENSCANG00000040728	LSM8	100	94.595	Colobus_angolensis_palliatus
ENSSMAG00000009458	lsm8	100	97.333	ENSCGRG00001000450	Lsm8	78	97.333	Cricetulus_griseus_chok1gshd
ENSSMAG00000009458	lsm8	100	97.333	ENSCGRG00000005587	Lsm8	88	97.333	Cricetulus_griseus_crigri
ENSSMAG00000009458	lsm8	96	98.611	ENSCSEG00000004164	lsm8	79	98.611	Cynoglossus_semilaevis
ENSSMAG00000009458	lsm8	100	96.000	ENSCVAG00000020547	lsm8	78	96.000	Cyprinodon_variegatus
ENSSMAG00000009458	lsm8	100	94.667	ENSDARG00000091656	lsm8	78	94.667	Danio_rerio
ENSSMAG00000009458	lsm8	100	97.333	ENSDNOG00000034613	LSM8	78	97.333	Dasypus_novemcinctus
ENSSMAG00000009458	lsm8	100	97.333	ENSDORG00000027868	Lsm8	78	97.333	Dipodomys_ordii
ENSSMAG00000009458	lsm8	97	71.233	FBgn0035271	CG2021	77	71.233	Drosophila_melanogaster
ENSSMAG00000009458	lsm8	100	96.000	ENSETEG00000011594	LSM8	78	96.000	Echinops_telfairi
ENSSMAG00000009458	lsm8	99	90.541	ENSEBUG00000012017	lsm8	100	90.541	Eptatretus_burgeri
ENSSMAG00000009458	lsm8	100	97.333	ENSECAG00000024025	LSM8	71	97.222	Equus_caballus
ENSSMAG00000009458	lsm8	100	96.000	ENSELUG00000010138	lsm8	78	96.000	Esox_lucius
ENSSMAG00000009458	lsm8	89	70.149	ENSFCAG00000044794	-	66	70.149	Felis_catus
ENSSMAG00000009458	lsm8	100	97.333	ENSFCAG00000036620	-	78	97.333	Felis_catus
ENSSMAG00000009458	lsm8	100	96.000	ENSFALG00000010023	LSM8	78	96.000	Ficedula_albicollis
ENSSMAG00000009458	lsm8	100	97.333	ENSFDAG00000019530	LSM8	78	97.333	Fukomys_damarensis
ENSSMAG00000009458	lsm8	100	97.333	ENSFHEG00000013729	lsm8	78	97.333	Fundulus_heteroclitus
ENSSMAG00000009458	lsm8	100	96.000	ENSGALG00000009110	LSM8	78	96.000	Gallus_gallus
ENSSMAG00000009458	lsm8	100	96.000	ENSGAFG00000001135	lsm8	78	96.000	Gambusia_affinis
ENSSMAG00000009458	lsm8	100	97.333	ENSGAGG00000017366	LSM8	78	97.333	Gopherus_agassizii
ENSSMAG00000009458	lsm8	100	97.333	ENSGGOG00000041883	LSM8	78	97.333	Gorilla_gorilla
ENSSMAG00000009458	lsm8	100	97.333	ENSHBUG00000003646	lsm8	78	97.333	Haplochromis_burtoni
ENSSMAG00000009458	lsm8	63	100.000	ENSHGLG00000001988	-	68	100.000	Heterocephalus_glaber_female
ENSSMAG00000009458	lsm8	100	90.667	ENSHGLG00000019782	-	78	90.667	Heterocephalus_glaber_female
ENSSMAG00000009458	lsm8	100	92.000	ENSHGLG00100012166	-	78	92.000	Heterocephalus_glaber_male
ENSSMAG00000009458	lsm8	99	93.243	ENSHGLG00100003934	-	74	93.243	Heterocephalus_glaber_male
ENSSMAG00000009458	lsm8	100	96.000	ENSHCOG00000005037	lsm8	78	96.000	Hippocampus_comes
ENSSMAG00000009458	lsm8	100	96.000	ENSIPUG00000019811	NAA38	78	96.000	Ictalurus_punctatus
ENSSMAG00000009458	lsm8	100	84.000	ENSSTOG00000034801	-	69	84.000	Ictidomys_tridecemlineatus
ENSSMAG00000009458	lsm8	100	97.333	ENSSTOG00000009039	LSM8	78	97.333	Ictidomys_tridecemlineatus
ENSSMAG00000009458	lsm8	100	97.333	ENSJJAG00000009031	Lsm8	77	97.333	Jaculus_jaculus
ENSSMAG00000009458	lsm8	100	97.333	ENSKMAG00000018983	lsm8	78	97.333	Kryptolebias_marmoratus
ENSSMAG00000009458	lsm8	100	93.333	ENSLACG00000010231	LSM8	78	93.333	Latimeria_chalumnae
ENSSMAG00000009458	lsm8	100	94.667	ENSLOCG00000015580	lsm8	78	94.667	Lepisosteus_oculatus
ENSSMAG00000009458	lsm8	100	97.333	ENSLAFG00000011242	LSM8	77	97.333	Loxodonta_africana
ENSSMAG00000009458	lsm8	100	94.667	ENSMFAG00000013044	-	78	94.667	Macaca_fascicularis
ENSSMAG00000009458	lsm8	100	97.333	ENSMFAG00000035798	LSM8	100	94.595	Macaca_fascicularis
ENSSMAG00000009458	lsm8	100	97.333	ENSMMUG00000046401	LSM8	100	94.595	Macaca_mulatta
ENSSMAG00000009458	lsm8	100	97.333	ENSMNEG00000036764	-	100	94.595	Macaca_nemestrina
ENSSMAG00000009458	lsm8	100	94.667	ENSMNEG00000011141	-	100	94.667	Macaca_nemestrina
ENSSMAG00000009458	lsm8	100	81.333	ENSMLEG00000039324	-	76	81.333	Mandrillus_leucophaeus
ENSSMAG00000009458	lsm8	100	97.333	ENSMLEG00000035828	-	100	94.595	Mandrillus_leucophaeus
ENSSMAG00000009458	lsm8	100	97.333	ENSMAMG00000018839	lsm8	100	97.333	Mastacembelus_armatus
ENSSMAG00000009458	lsm8	100	97.333	ENSMZEG00005019138	lsm8	78	97.333	Maylandia_zebra
ENSSMAG00000009458	lsm8	100	96.000	ENSMGAG00000008808	LSM8	78	96.000	Meleagris_gallopavo
ENSSMAG00000009458	lsm8	100	76.000	ENSMAUG00000015356	-	75	76.000	Mesocricetus_auratus
ENSSMAG00000009458	lsm8	99	87.838	ENSMAUG00000020287	-	100	87.838	Mesocricetus_auratus
ENSSMAG00000009458	lsm8	100	88.000	ENSMAUG00000015721	-	78	88.000	Mesocricetus_auratus
ENSSMAG00000009458	lsm8	100	97.333	ENSMICG00000042730	LSM8	78	97.333	Microcebus_murinus
ENSSMAG00000009458	lsm8	100	97.333	ENSMOCG00000001688	Lsm8	78	97.333	Microtus_ochrogaster
ENSSMAG00000009458	lsm8	100	97.333	ENSMMOG00000006046	lsm8	100	97.333	Mola_mola
ENSSMAG00000009458	lsm8	97	84.000	ENSMODG00000015729	LSM8	96	84.000	Monodelphis_domestica
ENSSMAG00000009458	lsm8	100	97.333	ENSMALG00000000405	lsm8	78	97.333	Monopterus_albus
ENSSMAG00000009458	lsm8	100	97.333	MGP_CAROLIEiJ_G0028125	-	78	97.333	Mus_caroli
ENSSMAG00000009458	lsm8	100	97.333	ENSMUSG00000044155	Lsm8	78	97.333	Mus_musculus
ENSSMAG00000009458	lsm8	100	97.333	MGP_PahariEiJ_G0021881	Lsm8	100	97.333	Mus_pahari
ENSSMAG00000009458	lsm8	100	97.333	MGP_SPRETEiJ_G0029125	-	78	97.333	Mus_spretus
ENSSMAG00000009458	lsm8	100	96.000	ENSMLUG00000027762	-	78	96.000	Myotis_lucifugus
ENSSMAG00000009458	lsm8	100	97.333	ENSMLUG00000006837	-	78	97.333	Myotis_lucifugus
ENSSMAG00000009458	lsm8	100	97.333	ENSNGAG00000016554	Lsm8	78	97.333	Nannospalax_galili
ENSSMAG00000009458	lsm8	100	97.333	ENSNBRG00000014441	lsm8	78	97.333	Neolamprologus_brichardi
ENSSMAG00000009458	lsm8	100	97.333	ENSNLEG00000011768	LSM8	78	97.333	Nomascus_leucogenys
ENSSMAG00000009458	lsm8	100	84.000	ENSMEUG00000007801	LSM8	78	84.000	Notamacropus_eugenii
ENSSMAG00000009458	lsm8	100	97.333	ENSOPRG00000014809	LSM8	88	97.333	Ochotona_princeps
ENSSMAG00000009458	lsm8	100	97.333	ENSODEG00000000418	-	78	97.333	Octodon_degus
ENSSMAG00000009458	lsm8	87	80.000	ENSODEG00000020290	-	76	80.000	Octodon_degus
ENSSMAG00000009458	lsm8	100	97.333	ENSOANG00000014536	LSM8	78	97.333	Ornithorhynchus_anatinus
ENSSMAG00000009458	lsm8	100	97.333	ENSOCUG00000017359	LSM8	77	97.333	Oryctolagus_cuniculus
ENSSMAG00000009458	lsm8	96	97.222	ENSORLG00000017432	lsm8	77	97.222	Oryzias_latipes
ENSSMAG00000009458	lsm8	96	97.222	ENSORLG00020004376	lsm8	77	97.222	Oryzias_latipes_hni
ENSSMAG00000009458	lsm8	100	97.333	ENSORLG00015003757	lsm8	78	97.333	Oryzias_latipes_hsok
ENSSMAG00000009458	lsm8	92	97.101	ENSOMEG00000022509	lsm8	83	93.333	Oryzias_melastigma
ENSSMAG00000009458	lsm8	100	97.333	ENSOGAG00000013377	LSM8	78	97.333	Otolemur_garnettii
ENSSMAG00000009458	lsm8	100	97.333	ENSOARG00000017974	LSM8	78	97.333	Ovis_aries
ENSSMAG00000009458	lsm8	100	97.333	ENSPPAG00000043228	-	100	97.333	Pan_paniscus
ENSSMAG00000009458	lsm8	100	97.333	ENSPPRG00000006444	LSM8	78	97.333	Panthera_pardus
ENSSMAG00000009458	lsm8	100	97.333	ENSPTIG00000004722	LSM8	78	97.333	Panthera_tigris_altaica
ENSSMAG00000009458	lsm8	100	97.333	ENSPTRG00000046596	-	100	97.333	Pan_troglodytes
ENSSMAG00000009458	lsm8	100	97.333	ENSPANG00000035470	-	100	94.595	Papio_anubis
ENSSMAG00000009458	lsm8	100	93.333	ENSPANG00000019395	-	78	93.333	Papio_anubis
ENSSMAG00000009458	lsm8	100	94.667	ENSPKIG00000006092	lsm8	76	94.667	Paramormyrops_kingsleyae
ENSSMAG00000009458	lsm8	100	97.333	ENSPSIG00000017054	LSM8	100	97.333	Pelodiscus_sinensis
ENSSMAG00000009458	lsm8	100	97.333	ENSPMGG00000016442	lsm8	100	97.333	Periophthalmus_magnuspinnatus
ENSSMAG00000009458	lsm8	99	94.595	ENSPEMG00000009153	Lsm8	100	94.595	Peromyscus_maniculatus_bairdii
ENSSMAG00000009458	lsm8	96	97.222	ENSPCIG00000021467	LSM8	76	97.222	Phascolarctos_cinereus
ENSSMAG00000009458	lsm8	100	96.000	ENSPFOG00000012340	lsm8	78	96.000	Poecilia_formosa
ENSSMAG00000009458	lsm8	100	96.000	ENSPLAG00000000516	lsm8	78	96.000	Poecilia_latipinna
ENSSMAG00000009458	lsm8	100	96.000	ENSPMEG00000022567	lsm8	78	96.000	Poecilia_mexicana
ENSSMAG00000009458	lsm8	97	85.000	ENSPREG00000005527	lsm8	72	85.000	Poecilia_reticulata
ENSSMAG00000009458	lsm8	100	97.333	ENSPPYG00000017942	LSM8	78	97.333	Pongo_abelii
ENSSMAG00000009458	lsm8	99	72.973	ENSPCOG00000017982	-	74	72.973	Propithecus_coquereli
ENSSMAG00000009458	lsm8	100	97.333	ENSPCOG00000003309	-	78	97.333	Propithecus_coquereli
ENSSMAG00000009458	lsm8	100	96.000	ENSPVAG00000000990	LSM8	88	96.000	Pteropus_vampyrus
ENSSMAG00000009458	lsm8	100	97.333	ENSPNYG00000011448	lsm8	78	97.333	Pundamilia_nyererei
ENSSMAG00000009458	lsm8	100	96.000	ENSPNAG00000010252	lsm8	78	96.000	Pygocentrus_nattereri
ENSSMAG00000009458	lsm8	100	97.333	ENSRNOG00000058677	Lsm8	78	97.333	Rattus_norvegicus
ENSSMAG00000009458	lsm8	100	97.333	ENSRBIG00000032851	LSM8	100	94.595	Rhinopithecus_bieti
ENSSMAG00000009458	lsm8	100	97.333	ENSRROG00000039618	LSM8	100	94.595	Rhinopithecus_roxellana
ENSSMAG00000009458	lsm8	100	97.333	ENSSBOG00000023223	LSM8	100	94.595	Saimiri_boliviensis_boliviensis
ENSSMAG00000009458	lsm8	100	97.333	ENSSHAG00000018435	-	78	97.333	Sarcophilus_harrisii
ENSSMAG00000009458	lsm8	100	93.333	ENSSFOG00015004412	lsm8	78	93.333	Scleropages_formosus
ENSSMAG00000009458	lsm8	100	97.333	ENSSDUG00000014702	lsm8	78	97.333	Seriola_dumerili
ENSSMAG00000009458	lsm8	100	97.333	ENSSLDG00000016870	lsm8	100	97.333	Seriola_lalandi_dorsalis
ENSSMAG00000009458	lsm8	96	97.222	ENSSARG00000009628	-	100	97.222	Sorex_araneus
ENSSMAG00000009458	lsm8	100	97.333	ENSSPUG00000017419	LSM8	78	97.333	Sphenodon_punctatus
ENSSMAG00000009458	lsm8	100	97.333	ENSSPAG00000021422	lsm8	78	97.333	Stegastes_partitus
ENSSMAG00000009458	lsm8	100	97.333	ENSSSCG00000021652	LSM8	78	97.333	Sus_scrofa
ENSSMAG00000009458	lsm8	100	94.667	ENSTGUG00000016823	-	78	94.667	Taeniopygia_guttata
ENSSMAG00000009458	lsm8	100	96.000	ENSTGUG00000004730	-	78	96.000	Taeniopygia_guttata
ENSSMAG00000009458	lsm8	100	97.333	ENSTRUG00000025192	lsm8	78	97.333	Takifugu_rubripes
ENSSMAG00000009458	lsm8	100	97.333	ENSTNIG00000002864	lsm8	78	97.333	Tetraodon_nigroviridis
ENSSMAG00000009458	lsm8	100	97.333	ENSTTRG00000001023	LSM8	78	97.333	Tursiops_truncatus
ENSSMAG00000009458	lsm8	100	97.333	ENSUAMG00000006943	-	78	97.333	Ursus_americanus
ENSSMAG00000009458	lsm8	100	97.333	ENSUMAG00000003073	LSM8	80	97.333	Ursus_maritimus
ENSSMAG00000009458	lsm8	100	97.333	ENSVPAG00000001530	LSM8	78	97.333	Vicugna_pacos
ENSSMAG00000009458	lsm8	100	94.667	ENSVVUG00000013248	-	82	94.667	Vulpes_vulpes
ENSSMAG00000009458	lsm8	100	94.667	ENSXETG00000021829	lsm8	77	94.667	Xenopus_tropicalis
ENSSMAG00000009458	lsm8	100	94.667	ENSXCOG00000012938	lsm8	79	94.667	Xiphophorus_couchianus
ENSSMAG00000009458	lsm8	100	96.000	ENSXMAG00000025919	lsm8	78	96.000	Xiphophorus_maculatus