EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000009495 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 39274 bases
Position: chr5:4874246-4913519
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015534	CPSF_A	PF03178.15	1.9e-85	1	1
ENSSMAP00000015561	CPSF_A	PF03178.15	3e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015757	-	3336	-	ENSSMAP00000015561	1111 (aa)	-	-
ENSSMAT00000015729	-	6372	-	ENSSMAP00000015534	1140 (aa)	-	A0A2U9BB97

Gene Model

Click here to download ENSSMAG00000009495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009495	ddb1	100	90.965	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSSMAG00000009495	ddb1	98	98.923	ENSAPOG00000005036	ddb1	99	98.878	Acanthochromis_polyacanthus
ENSSMAG00000009495	ddb1	100	91.053	ENSAMEG00000016518	DDB1	100	91.053	Ailuropoda_melanoleuca
ENSSMAG00000009495	ddb1	86	98.469	ENSACIG00000020624	ddb1	99	98.469	Amphilophus_citrinellus
ENSSMAG00000009495	ddb1	100	99.035	ENSAOCG00000003066	ddb1	100	99.035	Amphiprion_ocellaris
ENSSMAG00000009495	ddb1	100	99.035	ENSAPEG00000000092	ddb1	100	99.035	Amphiprion_percula
ENSSMAG00000009495	ddb1	94	98.791	ENSATEG00000020571	ddb1	97	98.791	Anabas_testudineus
ENSSMAG00000009495	ddb1	99	89.469	ENSAPLG00000007174	DDB1	99	89.469	Anas_platyrhynchos
ENSSMAG00000009495	ddb1	100	90.702	ENSACAG00000017758	DDB1	100	90.702	Anolis_carolinensis
ENSSMAG00000009495	ddb1	100	90.965	ENSANAG00000021878	DDB1	100	90.965	Aotus_nancymaae
ENSSMAG00000009495	ddb1	100	98.421	ENSACLG00000012401	ddb1	100	98.421	Astatotilapia_calliptera
ENSSMAG00000009495	ddb1	100	90.965	ENSBTAG00000021569	DDB1	93	90.965	Bos_taurus
ENSSMAG00000009495	ddb1	100	37.126	WBGene00010890	ddb-1	100	37.126	Caenorhabditis_elegans
ENSSMAG00000009495	ddb1	100	90.965	ENSCJAG00000019319	DDB1	100	90.965	Callithrix_jacchus
ENSSMAG00000009495	ddb1	100	91.053	ENSCAFG00000016264	DDB1	100	91.053	Canis_familiaris
ENSSMAG00000009495	ddb1	94	91.256	ENSCAFG00020012722	DDB1	99	91.256	Canis_lupus_dingo
ENSSMAG00000009495	ddb1	100	90.965	ENSCHIG00000014969	DDB1	100	90.965	Capra_hircus
ENSSMAG00000009495	ddb1	100	90.614	ENSTSYG00000008027	DDB1	100	90.614	Carlito_syrichta
ENSSMAG00000009495	ddb1	98	90.795	ENSCAPG00000010786	DDB1	100	90.795	Cavia_aperea
ENSSMAG00000009495	ddb1	100	90.877	ENSCPOG00000009956	DDB1	100	90.877	Cavia_porcellus
ENSSMAG00000009495	ddb1	100	90.965	ENSCCAG00000035883	DDB1	100	90.965	Cebus_capucinus
ENSSMAG00000009495	ddb1	100	88.542	ENSCATG00000044495	DDB1	100	88.542	Cercocebus_atys
ENSSMAG00000009495	ddb1	100	90.965	ENSCLAG00000004126	DDB1	100	90.965	Chinchilla_lanigera
ENSSMAG00000009495	ddb1	100	90.965	ENSCSAG00000006392	DDB1	100	90.965	Chlorocebus_sabaeus
ENSSMAG00000009495	ddb1	88	84.659	ENSCHOG00000011377	DDB1	90	84.659	Choloepus_hoffmanni
ENSSMAG00000009495	ddb1	100	90.789	ENSCPBG00000017728	DDB1	100	90.789	Chrysemys_picta_bellii
ENSSMAG00000009495	ddb1	100	61.458	ENSCING00000007437	-	100	61.458	Ciona_intestinalis
ENSSMAG00000009495	ddb1	94	60.461	ENSCSAVG00000004783	-	100	60.461	Ciona_savignyi
ENSSMAG00000009495	ddb1	100	90.965	ENSCANG00000019948	DDB1	100	90.965	Colobus_angolensis_palliatus
ENSSMAG00000009495	ddb1	100	91.053	ENSCGRG00001016599	Ddb1	100	91.053	Cricetulus_griseus_chok1gshd
ENSSMAG00000009495	ddb1	100	91.053	ENSCGRG00000013427	Ddb1	100	91.053	Cricetulus_griseus_crigri
ENSSMAG00000009495	ddb1	93	98.492	ENSCSEG00000012499	ddb1	99	96.761	Cynoglossus_semilaevis
ENSSMAG00000009495	ddb1	94	97.297	ENSCVAG00000019531	ddb1	99	97.297	Cyprinodon_variegatus
ENSSMAG00000009495	ddb1	100	92.469	ENSDARG00000074431	ddb1	100	92.469	Danio_rerio
ENSSMAG00000009495	ddb1	94	91.256	ENSDNOG00000014884	DDB1	97	91.256	Dasypus_novemcinctus
ENSSMAG00000009495	ddb1	84	95.455	ENSDORG00000000127	Ddb1	100	95.455	Dipodomys_ordii
ENSSMAG00000009495	ddb1	100	60.611	FBgn0260962	pic	100	60.611	Drosophila_melanogaster
ENSSMAG00000009495	ddb1	78	30.719	FBgn0024698	Cpsf160	68	30.719	Drosophila_melanogaster
ENSSMAG00000009495	ddb1	71	95.276	ENSETEG00000001053	-	71	95.276	Echinops_telfairi
ENSSMAG00000009495	ddb1	78	84.477	ENSEBUG00000014593	ddb1	97	84.477	Eptatretus_burgeri
ENSSMAG00000009495	ddb1	100	91.053	ENSEASG00005008184	DDB1	100	91.053	Equus_asinus_asinus
ENSSMAG00000009495	ddb1	100	91.053	ENSECAG00000012136	DDB1	100	91.053	Equus_caballus
ENSSMAG00000009495	ddb1	85	87.205	ENSEEUG00000003194	DDB1	85	87.205	Erinaceus_europaeus
ENSSMAG00000009495	ddb1	100	97.105	ENSELUG00000023868	ddb1	100	97.105	Esox_lucius
ENSSMAG00000009495	ddb1	100	91.053	ENSFCAG00000029716	DDB1	100	91.053	Felis_catus
ENSSMAG00000009495	ddb1	100	90.114	ENSFALG00000011981	DDB1	100	90.114	Ficedula_albicollis
ENSSMAG00000009495	ddb1	100	90.965	ENSFDAG00000005128	DDB1	100	90.965	Fukomys_damarensis
ENSSMAG00000009495	ddb1	90	96.471	ENSFHEG00000022133	ddb1	99	96.471	Fundulus_heteroclitus
ENSSMAG00000009495	ddb1	79	98.328	ENSGMOG00000019386	ddb1	94	98.328	Gadus_morhua
ENSSMAG00000009495	ddb1	100	90.702	ENSGALG00000042333	DDB1	100	90.702	Gallus_gallus
ENSSMAG00000009495	ddb1	94	97.950	ENSGAFG00000013142	ddb1	99	97.950	Gambusia_affinis
ENSSMAG00000009495	ddb1	96	97.525	ENSGACG00000017182	ddb1	100	97.525	Gasterosteus_aculeatus
ENSSMAG00000009495	ddb1	95	90.590	ENSGAGG00000014124	DDB1	100	90.590	Gopherus_agassizii
ENSSMAG00000009495	ddb1	100	90.965	ENSGGOG00000004052	DDB1	100	90.965	Gorilla_gorilla
ENSSMAG00000009495	ddb1	100	98.421	ENSHBUG00000008873	ddb1	100	98.524	Haplochromis_burtoni
ENSSMAG00000009495	ddb1	100	90.965	ENSHGLG00000018430	DDB1	100	90.965	Heterocephalus_glaber_female
ENSSMAG00000009495	ddb1	100	90.000	ENSHGLG00100014475	DDB1	100	90.000	Heterocephalus_glaber_male
ENSSMAG00000009495	ddb1	94	97.862	ENSHCOG00000018670	ddb1	98	97.862	Hippocampus_comes
ENSSMAG00000009495	ddb1	100	95.965	ENSIPUG00000005612	DDB1	100	95.965	Ictalurus_punctatus
ENSSMAG00000009495	ddb1	100	90.965	ENSSTOG00000007552	DDB1	100	90.965	Ictidomys_tridecemlineatus
ENSSMAG00000009495	ddb1	100	90.877	ENSJJAG00000017769	Ddb1	100	90.877	Jaculus_jaculus
ENSSMAG00000009495	ddb1	94	97.950	ENSKMAG00000002315	ddb1	99	97.950	Kryptolebias_marmoratus
ENSSMAG00000009495	ddb1	84	99.168	ENSLBEG00000017065	ddb1	99	99.168	Labrus_bergylta
ENSSMAG00000009495	ddb1	100	90.806	ENSLACG00000017611	DDB1	100	90.806	Latimeria_chalumnae
ENSSMAG00000009495	ddb1	92	88.324	ENSLOCG00000000012	ddb1	100	88.324	Lepisosteus_oculatus
ENSSMAG00000009495	ddb1	100	90.877	ENSLAFG00000011513	DDB1	100	90.877	Loxodonta_africana
ENSSMAG00000009495	ddb1	100	90.965	ENSMFAG00000042035	DDB1	100	90.965	Macaca_fascicularis
ENSSMAG00000009495	ddb1	99	90.981	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSSMAG00000009495	ddb1	100	90.965	ENSMNEG00000031559	DDB1	100	90.965	Macaca_nemestrina
ENSSMAG00000009495	ddb1	100	90.965	ENSMLEG00000044136	DDB1	100	90.965	Mandrillus_leucophaeus
ENSSMAG00000009495	ddb1	100	99.211	ENSMAMG00000014372	ddb1	100	99.211	Mastacembelus_armatus
ENSSMAG00000009495	ddb1	100	98.333	ENSMZEG00005013835	ddb1	100	98.333	Maylandia_zebra
ENSSMAG00000009495	ddb1	94	89.944	ENSMGAG00000004990	DDB1	100	89.944	Meleagris_gallopavo
ENSSMAG00000009495	ddb1	100	91.053	ENSMAUG00000012926	Ddb1	100	91.053	Mesocricetus_auratus
ENSSMAG00000009495	ddb1	100	91.140	ENSMICG00000013703	DDB1	100	91.140	Microcebus_murinus
ENSSMAG00000009495	ddb1	100	90.965	ENSMOCG00000020499	Ddb1	100	90.965	Microtus_ochrogaster
ENSSMAG00000009495	ddb1	86	98.980	ENSMMOG00000001758	ddb1	99	98.980	Mola_mola
ENSSMAG00000009495	ddb1	100	82.353	ENSMODG00000020353	DDB1	100	82.353	Monodelphis_domestica
ENSSMAG00000009495	ddb1	100	99.035	ENSMALG00000014071	ddb1	100	99.035	Monopterus_albus
ENSSMAG00000009495	ddb1	100	91.053	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.053	Mus_caroli
ENSSMAG00000009495	ddb1	100	91.140	ENSMUSG00000024740	Ddb1	100	91.140	Mus_musculus
ENSSMAG00000009495	ddb1	100	91.053	MGP_PahariEiJ_G0014189	Ddb1	100	91.053	Mus_pahari
ENSSMAG00000009495	ddb1	100	91.140	MGP_SPRETEiJ_G0023609	Ddb1	100	91.140	Mus_spretus
ENSSMAG00000009495	ddb1	100	87.982	ENSMPUG00000014200	DDB1	100	87.982	Mustela_putorius_furo
ENSSMAG00000009495	ddb1	100	91.140	ENSMLUG00000013232	DDB1	100	91.140	Myotis_lucifugus
ENSSMAG00000009495	ddb1	100	90.965	ENSNGAG00000009384	Ddb1	100	90.965	Nannospalax_galili
ENSSMAG00000009495	ddb1	100	98.509	ENSNBRG00000019581	ddb1	100	98.509	Neolamprologus_brichardi
ENSSMAG00000009495	ddb1	100	88.108	ENSNLEG00000002022	DDB1	100	88.108	Nomascus_leucogenys
ENSSMAG00000009495	ddb1	90	94.014	ENSMEUG00000001099	DDB1	93	94.014	Notamacropus_eugenii
ENSSMAG00000009495	ddb1	90	82.444	ENSOPRG00000008254	DDB1	90	82.444	Ochotona_princeps
ENSSMAG00000009495	ddb1	100	90.965	ENSODEG00000002419	DDB1	100	90.965	Octodon_degus
ENSSMAG00000009495	ddb1	100	98.509	ENSONIG00000005804	ddb1	100	98.509	Oreochromis_niloticus
ENSSMAG00000009495	ddb1	91	90.698	ENSOANG00000004897	DDB1	100	90.698	Ornithorhynchus_anatinus
ENSSMAG00000009495	ddb1	100	90.965	ENSOCUG00000001667	DDB1	100	90.965	Oryctolagus_cuniculus
ENSSMAG00000009495	ddb1	96	96.150	ENSORLG00000001399	ddb1	98	97.406	Oryzias_latipes
ENSSMAG00000009495	ddb1	96	96.242	ENSORLG00020001277	ddb1	97	96.242	Oryzias_latipes_hni
ENSSMAG00000009495	ddb1	94	97.302	ENSORLG00015002080	ddb1	99	97.302	Oryzias_latipes_hsok
ENSSMAG00000009495	ddb1	96	95.807	ENSOMEG00000006181	ddb1	99	95.807	Oryzias_melastigma
ENSSMAG00000009495	ddb1	100	91.140	ENSOGAG00000016103	DDB1	100	91.140	Otolemur_garnettii
ENSSMAG00000009495	ddb1	99	91.184	ENSOARG00000011716	DDB1	98	91.184	Ovis_aries
ENSSMAG00000009495	ddb1	100	90.965	ENSPPAG00000035343	DDB1	100	90.965	Pan_paniscus
ENSSMAG00000009495	ddb1	100	91.053	ENSPPRG00000013300	DDB1	100	91.053	Panthera_pardus
ENSSMAG00000009495	ddb1	98	90.974	ENSPTIG00000006909	DDB1	98	90.974	Panthera_tigris_altaica
ENSSMAG00000009495	ddb1	100	90.965	ENSPTRG00000003737	DDB1	100	90.965	Pan_troglodytes
ENSSMAG00000009495	ddb1	100	90.965	ENSPANG00000000242	DDB1	100	90.965	Papio_anubis
ENSSMAG00000009495	ddb1	94	96.365	ENSPKIG00000019213	ddb1	94	96.365	Paramormyrops_kingsleyae
ENSSMAG00000009495	ddb1	98	90.302	ENSPSIG00000013275	DDB1	100	90.302	Pelodiscus_sinensis
ENSSMAG00000009495	ddb1	86	98.776	ENSPMGG00000021179	ddb1	99	98.776	Periophthalmus_magnuspinnatus
ENSSMAG00000009495	ddb1	100	91.053	ENSPEMG00000012241	Ddb1	100	91.053	Peromyscus_maniculatus_bairdii
ENSSMAG00000009495	ddb1	89	86.640	ENSPMAG00000008479	ddb1	100	86.640	Petromyzon_marinus
ENSSMAG00000009495	ddb1	100	91.228	ENSPCIG00000002643	DDB1	100	91.228	Phascolarctos_cinereus
ENSSMAG00000009495	ddb1	100	97.984	ENSPFOG00000002768	ddb1	100	97.984	Poecilia_formosa
ENSSMAG00000009495	ddb1	100	97.807	ENSPLAG00000017227	ddb1	100	97.807	Poecilia_latipinna
ENSSMAG00000009495	ddb1	100	97.807	ENSPMEG00000011398	ddb1	100	97.807	Poecilia_mexicana
ENSSMAG00000009495	ddb1	94	98.047	ENSPREG00000004440	ddb1	98	98.047	Poecilia_reticulata
ENSSMAG00000009495	ddb1	100	86.736	ENSPPYG00000003193	DDB1	100	86.736	Pongo_abelii
ENSSMAG00000009495	ddb1	85	88.955	ENSPCAG00000011040	DDB1	85	88.955	Procavia_capensis
ENSSMAG00000009495	ddb1	100	89.930	ENSPCOG00000015176	DDB1	100	89.930	Propithecus_coquereli
ENSSMAG00000009495	ddb1	100	90.877	ENSPVAG00000003847	DDB1	100	90.877	Pteropus_vampyrus
ENSSMAG00000009495	ddb1	94	96.365	ENSPNAG00000006635	ddb1	97	96.365	Pygocentrus_nattereri
ENSSMAG00000009495	ddb1	100	91.140	ENSRNOG00000020715	Ddb1	100	91.140	Rattus_norvegicus
ENSSMAG00000009495	ddb1	100	90.965	ENSRBIG00000033611	DDB1	100	90.965	Rhinopithecus_bieti
ENSSMAG00000009495	ddb1	100	90.965	ENSRROG00000041407	DDB1	100	90.965	Rhinopithecus_roxellana
ENSSMAG00000009495	ddb1	100	91.053	ENSSBOG00000019775	DDB1	100	91.053	Saimiri_boliviensis_boliviensis
ENSSMAG00000009495	ddb1	94	88.785	ENSSHAG00000011600	DDB1	100	88.785	Sarcophilus_harrisii
ENSSMAG00000009495	ddb1	94	96.004	ENSSFOG00015011151	ddb1	97	96.004	Scleropages_formosus
ENSSMAG00000009495	ddb1	100	99.386	ENSSDUG00000004642	ddb1	100	99.386	Seriola_dumerili
ENSSMAG00000009495	ddb1	100	99.386	ENSSLDG00000015804	ddb1	100	99.386	Seriola_lalandi_dorsalis
ENSSMAG00000009495	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSSMAG00000009495	ddb1	100	90.789	ENSSPUG00000019338	DDB1	100	90.789	Sphenodon_punctatus
ENSSMAG00000009495	ddb1	94	98.884	ENSSPAG00000009888	ddb1	99	98.884	Stegastes_partitus
ENSSMAG00000009495	ddb1	100	90.088	ENSSSCG00000013094	DDB1	100	90.088	Sus_scrofa
ENSSMAG00000009495	ddb1	100	90.263	ENSTGUG00000006414	DDB1	100	90.263	Taeniopygia_guttata
ENSSMAG00000009495	ddb1	94	97.856	ENSTRUG00000016682	ddb1	98	97.856	Takifugu_rubripes
ENSSMAG00000009495	ddb1	88	92.914	ENSTNIG00000009565	ddb1	99	92.914	Tetraodon_nigroviridis
ENSSMAG00000009495	ddb1	92	85.248	ENSTTRG00000011055	DDB1	94	85.248	Tursiops_truncatus
ENSSMAG00000009495	ddb1	94	91.256	ENSUAMG00000017793	DDB1	93	91.256	Ursus_americanus
ENSSMAG00000009495	ddb1	94	91.256	ENSUMAG00000011788	DDB1	98	91.256	Ursus_maritimus
ENSSMAG00000009495	ddb1	90	86.275	ENSVPAG00000007963	DDB1	92	86.275	Vicugna_pacos
ENSSMAG00000009495	ddb1	100	91.053	ENSVVUG00000004987	DDB1	100	91.053	Vulpes_vulpes
ENSSMAG00000009495	ddb1	100	88.724	ENSXETG00000008820	ddb1	100	88.724	Xenopus_tropicalis
ENSSMAG00000009495	ddb1	86	98.061	ENSXCOG00000013956	ddb1	99	98.061	Xiphophorus_couchianus
ENSSMAG00000009495	ddb1	94	97.950	ENSXMAG00000000022	ddb1	99	97.950	Xiphophorus_maculatus