EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000009504 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 57766 bases
Position: chr3:10891169-10948934
Accession: ZDB-GENE-030131-3762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015538	AARP2CN	PF08142.12	5.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015733	-	3253	-	ENSSMAP00000015538	833 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009504's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009504	tsr1	99	53.726	ENSG00000167721	TSR1	99	54.077	Homo_sapiens
ENSSMAG00000009504	tsr1	100	87.560	ENSAPOG00000020891	tsr1	100	86.962	Acanthochromis_polyacanthus
ENSSMAG00000009504	tsr1	99	54.447	ENSAMEG00000007599	TSR1	99	52.650	Ailuropoda_melanoleuca
ENSSMAG00000009504	tsr1	100	82.974	ENSACIG00000007090	tsr1	100	82.134	Amphilophus_citrinellus
ENSSMAG00000009504	tsr1	100	87.170	ENSAOCG00000023284	tsr1	100	86.811	Amphiprion_ocellaris
ENSSMAG00000009504	tsr1	93	87.259	ENSAPEG00000008452	tsr1	100	86.873	Amphiprion_percula
ENSSMAG00000009504	tsr1	100	85.952	ENSATEG00000021961	tsr1	100	85.476	Anabas_testudineus
ENSSMAG00000009504	tsr1	90	57.427	ENSAPLG00000013422	TSR1	98	57.825	Anas_platyrhynchos
ENSSMAG00000009504	tsr1	71	49.917	ENSACAG00000000859	TSR1	92	48.926	Anolis_carolinensis
ENSSMAG00000009504	tsr1	99	55.168	ENSANAG00000031071	TSR1	99	54.327	Aotus_nancymaae
ENSSMAG00000009504	tsr1	100	85.851	ENSACLG00000007595	tsr1	99	85.012	Astatotilapia_calliptera
ENSSMAG00000009504	tsr1	50	74.584	ENSAMXG00000008470	tsr1	89	74.584	Astyanax_mexicanus
ENSSMAG00000009504	tsr1	99	55.114	ENSBTAG00000004225	TSR1	99	54.916	Bos_taurus
ENSSMAG00000009504	tsr1	66	31.020	WBGene00022021	Y61A9LA.10	51	30.833	Caenorhabditis_elegans
ENSSMAG00000009504	tsr1	96	39.976	WBGene00006497	tag-151	96	39.438	Caenorhabditis_elegans
ENSSMAG00000009504	tsr1	99	54.087	ENSCJAG00000012456	TSR1	99	53.486	Callithrix_jacchus
ENSSMAG00000009504	tsr1	99	54.688	ENSCAFG00000002106	-	99	52.764	Canis_familiaris
ENSSMAG00000009504	tsr1	89	52.785	ENSCAFG00000019273	-	100	54.319	Canis_familiaris
ENSSMAG00000009504	tsr1	99	54.567	ENSCAFG00020009728	TSR1	99	52.644	Canis_lupus_dingo
ENSSMAG00000009504	tsr1	99	54.904	ENSCHIG00000023935	TSR1	99	54.286	Capra_hircus
ENSSMAG00000009504	tsr1	99	55.409	ENSTSYG00000005468	TSR1	99	54.371	Carlito_syrichta
ENSSMAG00000009504	tsr1	92	54.780	ENSCPOG00000014833	TSR1	99	55.141	Cavia_porcellus
ENSSMAG00000009504	tsr1	92	54.264	ENSCCAG00000028962	TSR1	98	53.618	Cebus_capucinus
ENSSMAG00000009504	tsr1	99	54.077	ENSCATG00000044262	TSR1	99	54.077	Cercocebus_atys
ENSSMAG00000009504	tsr1	99	56.130	ENSCLAG00000005567	TSR1	99	54.731	Chinchilla_lanigera
ENSSMAG00000009504	tsr1	99	54.197	ENSCSAG00000013788	TSR1	99	54.197	Chlorocebus_sabaeus
ENSSMAG00000009504	tsr1	98	55.583	ENSCPBG00000020363	TSR1	97	54.994	Chrysemys_picta_bellii
ENSSMAG00000009504	tsr1	96	43.956	ENSCING00000020658	-	99	43.834	Ciona_intestinalis
ENSSMAG00000009504	tsr1	96	43.650	ENSCSAVG00000001875	-	100	43.033	Ciona_savignyi
ENSSMAG00000009504	tsr1	99	49.279	ENSCANG00000033056	TSR1	99	47.967	Colobus_angolensis_palliatus
ENSSMAG00000009504	tsr1	99	53.486	ENSCGRG00001023942	Tsr1	99	53.054	Cricetulus_griseus_chok1gshd
ENSSMAG00000009504	tsr1	100	83.673	ENSCSEG00000013009	tsr1	100	83.553	Cynoglossus_semilaevis
ENSSMAG00000009504	tsr1	100	81.873	ENSCVAG00000000506	tsr1	100	81.273	Cyprinodon_variegatus
ENSSMAG00000009504	tsr1	99	75.030	ENSDARG00000007744	tsr1	99	75.149	Danio_rerio
ENSSMAG00000009504	tsr1	99	56.010	ENSDNOG00000004715	TSR1	99	56.540	Dasypus_novemcinctus
ENSSMAG00000009504	tsr1	99	54.567	ENSDORG00000016371	-	99	53.892	Dipodomys_ordii
ENSSMAG00000009504	tsr1	96	48.689	ENSDORG00000023234	-	99	48.010	Dipodomys_ordii
ENSSMAG00000009504	tsr1	96	42.611	FBgn0037073	Tsr1	96	41.932	Drosophila_melanogaster
ENSSMAG00000009504	tsr1	86	67.213	ENSETEG00000017534	TSR1	88	65.902	Echinops_telfairi
ENSSMAG00000009504	tsr1	94	51.894	ENSEBUG00000013731	TSR1	97	50.126	Eptatretus_burgeri
ENSSMAG00000009504	tsr1	99	55.288	ENSEASG00005009302	TSR1	97	54.448	Equus_asinus_asinus
ENSSMAG00000009504	tsr1	99	55.193	ENSECAG00000009114	TSR1	99	54.470	Equus_caballus
ENSSMAG00000009504	tsr1	100	76.253	ENSELUG00000020984	tsr1	96	76.134	Esox_lucius
ENSSMAG00000009504	tsr1	99	53.883	ENSFCAG00000006313	TSR1	99	54.048	Felis_catus
ENSSMAG00000009504	tsr1	99	57.091	ENSFALG00000006532	TSR1	99	55.875	Ficedula_albicollis
ENSSMAG00000009504	tsr1	99	54.994	ENSFDAG00000006038	TSR1	99	53.461	Fukomys_damarensis
ENSSMAG00000009504	tsr1	100	82.635	ENSFHEG00000003626	tsr1	99	82.275	Fundulus_heteroclitus
ENSSMAG00000009504	tsr1	100	72.792	ENSGMOG00000010336	tsr1	100	73.508	Gadus_morhua
ENSSMAG00000009504	tsr1	100	81.557	ENSGAFG00000012993	tsr1	99	80.479	Gambusia_affinis
ENSSMAG00000009504	tsr1	100	83.948	ENSGACG00000010843	tsr1	100	83.948	Gasterosteus_aculeatus
ENSSMAG00000009504	tsr1	98	54.733	ENSGAGG00000025619	-	99	54.513	Gopherus_agassizii
ENSSMAG00000009504	tsr1	99	54.087	ENSGGOG00000001704	TSR1	99	54.197	Gorilla_gorilla
ENSSMAG00000009504	tsr1	100	86.331	ENSHBUG00000017904	tsr1	100	85.328	Haplochromis_burtoni
ENSSMAG00000009504	tsr1	96	48.941	ENSHGLG00000015688	-	98	47.323	Heterocephalus_glaber_female
ENSSMAG00000009504	tsr1	99	55.423	ENSHGLG00000012806	-	99	54.286	Heterocephalus_glaber_female
ENSSMAG00000009504	tsr1	99	55.423	ENSHGLG00100015392	TSR1	99	54.286	Heterocephalus_glaber_male
ENSSMAG00000009504	tsr1	100	78.417	ENSHCOG00000001432	tsr1	100	78.177	Hippocampus_comes
ENSSMAG00000009504	tsr1	100	73.540	ENSIPUG00000004618	tsr1	100	73.421	Ictalurus_punctatus
ENSSMAG00000009504	tsr1	99	56.168	ENSSTOG00000011819	TSR1	99	55.675	Ictidomys_tridecemlineatus
ENSSMAG00000009504	tsr1	90	53.211	ENSJJAG00000019505	Tsr1	95	51.503	Jaculus_jaculus
ENSSMAG00000009504	tsr1	100	82.014	ENSKMAG00000005763	tsr1	99	82.014	Kryptolebias_marmoratus
ENSSMAG00000009504	tsr1	100	86.946	ENSLBEG00000021823	tsr1	99	86.707	Labrus_bergylta
ENSSMAG00000009504	tsr1	100	56.635	ENSLACG00000002197	TSR1	100	55.962	Latimeria_chalumnae
ENSSMAG00000009504	tsr1	93	78.667	ENSLOCG00000006491	TSR1	99	78.667	Lepisosteus_oculatus
ENSSMAG00000009504	tsr1	99	54.436	ENSMFAG00000021330	TSR1	99	54.436	Macaca_fascicularis
ENSSMAG00000009504	tsr1	99	54.317	ENSMMUG00000017519	TSR1	99	54.317	Macaca_mulatta
ENSSMAG00000009504	tsr1	99	54.436	ENSMNEG00000031382	TSR1	99	54.436	Macaca_nemestrina
ENSSMAG00000009504	tsr1	99	53.957	ENSMLEG00000036733	TSR1	99	53.957	Mandrillus_leucophaeus
ENSSMAG00000009504	tsr1	100	85.357	ENSMAMG00000017918	tsr1	99	85.238	Mastacembelus_armatus
ENSSMAG00000009504	tsr1	100	85.167	ENSMZEG00005007477	tsr1	100	83.732	Maylandia_zebra
ENSSMAG00000009504	tsr1	99	56.919	ENSMGAG00000005576	TSR1	99	56.182	Meleagris_gallopavo
ENSSMAG00000009504	tsr1	99	55.904	ENSMICG00000012943	TSR1	99	55.755	Microcebus_murinus
ENSSMAG00000009504	tsr1	99	53.421	ENSMOCG00000022764	Tsr1	99	53.230	Microtus_ochrogaster
ENSSMAG00000009504	tsr1	100	85.612	ENSMMOG00000014280	tsr1	100	85.612	Mola_mola
ENSSMAG00000009504	tsr1	98	57.594	ENSMODG00000010658	TSR1	99	56.538	Monodelphis_domestica
ENSSMAG00000009504	tsr1	100	85.971	ENSMALG00000011681	tsr1	100	85.971	Monopterus_albus
ENSSMAG00000009504	tsr1	99	53.772	MGP_CAROLIEiJ_G0016727	Tsr1	99	53.245	Mus_caroli
ENSSMAG00000009504	tsr1	99	54.251	ENSMUSG00000038335	Tsr1	99	53.726	Mus_musculus
ENSSMAG00000009504	tsr1	99	56.010	MGP_PahariEiJ_G0017864	Tsr1	99	53.892	Mus_pahari
ENSSMAG00000009504	tsr1	99	54.251	MGP_SPRETEiJ_G0017570	Tsr1	99	53.726	Mus_spretus
ENSSMAG00000009504	tsr1	81	57.833	ENSMPUG00000013000	TSR1	100	55.637	Mustela_putorius_furo
ENSSMAG00000009504	tsr1	98	56.121	ENSMLUG00000003505	TSR1	99	55.662	Myotis_lucifugus
ENSSMAG00000009504	tsr1	100	86.451	ENSNBRG00000020728	tsr1	99	85.731	Neolamprologus_brichardi
ENSSMAG00000009504	tsr1	99	52.221	ENSMEUG00000015828	TSR1	99	51.794	Notamacropus_eugenii
ENSSMAG00000009504	tsr1	100	84.248	ENSONIG00000013131	tsr1	100	83.413	Oreochromis_niloticus
ENSSMAG00000009504	tsr1	95	53.284	ENSOANG00000008637	TSR1	100	51.985	Ornithorhynchus_anatinus
ENSSMAG00000009504	tsr1	99	55.024	ENSOCUG00000014256	TSR1	99	54.762	Oryctolagus_cuniculus
ENSSMAG00000009504	tsr1	100	82.494	ENSORLG00000004926	tsr1	99	82.494	Oryzias_latipes
ENSSMAG00000009504	tsr1	100	82.494	ENSORLG00020008792	tsr1	99	82.374	Oryzias_latipes_hni
ENSSMAG00000009504	tsr1	100	82.614	ENSORLG00015013838	tsr1	99	82.614	Oryzias_latipes_hsok
ENSSMAG00000009504	tsr1	100	82.395	ENSOMEG00000004830	tsr1	99	82.156	Oryzias_melastigma
ENSSMAG00000009504	tsr1	99	54.869	ENSOGAG00000004492	TSR1	99	53.444	Otolemur_garnettii
ENSSMAG00000009504	tsr1	99	55.409	ENSOARG00000015437	TSR1	97	55.090	Ovis_aries
ENSSMAG00000009504	tsr1	99	53.726	ENSPPAG00000036355	TSR1	99	54.077	Pan_paniscus
ENSSMAG00000009504	tsr1	99	53.644	ENSPPRG00000015519	-	99	53.810	Panthera_pardus
ENSSMAG00000009504	tsr1	99	53.644	ENSPTIG00000010608	TSR1	99	53.810	Panthera_tigris_altaica
ENSSMAG00000009504	tsr1	99	53.726	ENSPTRG00000008547	TSR1	99	54.077	Pan_troglodytes
ENSSMAG00000009504	tsr1	99	51.679	ENSPANG00000024463	TSR1	99	52.101	Papio_anubis
ENSSMAG00000009504	tsr1	100	71.770	ENSPKIG00000013972	tsr1	100	71.292	Paramormyrops_kingsleyae
ENSSMAG00000009504	tsr1	87	55.068	ENSPSIG00000018258	TSR1	99	54.632	Pelodiscus_sinensis
ENSSMAG00000009504	tsr1	99	80.168	ENSPMGG00000011577	tsr1	100	79.137	Periophthalmus_magnuspinnatus
ENSSMAG00000009504	tsr1	99	53.837	ENSPEMG00000018033	Tsr1	99	52.569	Peromyscus_maniculatus_bairdii
ENSSMAG00000009504	tsr1	99	56.235	ENSPCIG00000009357	TSR1	97	55.861	Phascolarctos_cinereus
ENSSMAG00000009504	tsr1	100	80.622	ENSPFOG00000004483	TSR1	100	80.359	Poecilia_formosa
ENSSMAG00000009504	tsr1	100	81.340	ENSPLAG00000022320	tsr1	99	81.579	Poecilia_latipinna
ENSSMAG00000009504	tsr1	100	81.579	ENSPMEG00000004577	tsr1	99	81.818	Poecilia_mexicana
ENSSMAG00000009504	tsr1	97	82.389	ENSPREG00000010354	tsr1	96	82.780	Poecilia_reticulata
ENSSMAG00000009504	tsr1	99	49.110	ENSPPYG00000007792	TSR1	99	49.348	Pongo_abelii
ENSSMAG00000009504	tsr1	51	67.442	ENSPCAG00000012973	-	69	67.568	Procavia_capensis
ENSSMAG00000009504	tsr1	99	55.301	ENSPCOG00000017928	TSR1	99	54.458	Propithecus_coquereli
ENSSMAG00000009504	tsr1	99	55.409	ENSPVAG00000002162	TSR1	99	54.611	Pteropus_vampyrus
ENSSMAG00000009504	tsr1	100	85.851	ENSPNYG00000016163	tsr1	99	85.012	Pundamilia_nyererei
ENSSMAG00000009504	tsr1	99	74.940	ENSPNAG00000008659	tsr1	99	74.940	Pygocentrus_nattereri
ENSSMAG00000009504	tsr1	99	53.125	ENSRNOG00000002980	Tsr1	99	52.885	Rattus_norvegicus
ENSSMAG00000009504	tsr1	99	54.556	ENSRBIG00000040016	TSR1	99	54.122	Rhinopithecus_bieti
ENSSMAG00000009504	tsr1	99	54.436	ENSRROG00000030361	TSR1	99	54.002	Rhinopithecus_roxellana
ENSSMAG00000009504	tsr1	99	54.928	ENSSBOG00000020785	TSR1	99	54.077	Saimiri_boliviensis_boliviensis
ENSSMAG00000009504	tsr1	99	56.459	ENSSHAG00000011394	TSR1	99	55.861	Sarcophilus_harrisii
ENSSMAG00000009504	tsr1	100	74.580	ENSSFOG00015005455	tsr1	100	74.580	Scleropages_formosus
ENSSMAG00000009504	tsr1	100	89.461	ENSSDUG00000012074	tsr1	99	89.461	Seriola_dumerili
ENSSMAG00000009504	tsr1	100	89.808	ENSSLDG00000002031	tsr1	99	89.568	Seriola_lalandi_dorsalis
ENSSMAG00000009504	tsr1	93	55.378	ENSSARG00000000759	TSR1	93	55.378	Sorex_araneus
ENSSMAG00000009504	tsr1	99	57.365	ENSSPUG00000007042	TSR1	99	56.851	Sphenodon_punctatus
ENSSMAG00000009504	tsr1	100	87.575	ENSSPAG00000021951	tsr1	100	88.172	Stegastes_partitus
ENSSMAG00000009504	tsr1	99	55.649	ENSSSCG00000038534	TSR1	99	54.923	Sus_scrofa
ENSSMAG00000009504	tsr1	90	59.019	ENSTGUG00000005883	TSR1	100	57.540	Taeniopygia_guttata
ENSSMAG00000009504	tsr1	100	83.094	ENSTRUG00000004665	tsr1	100	82.494	Takifugu_rubripes
ENSSMAG00000009504	tsr1	99	82.467	ENSTNIG00000016196	tsr1	100	82.104	Tetraodon_nigroviridis
ENSSMAG00000009504	tsr1	67	69.231	ENSTBEG00000015275	-	66	69.231	Tupaia_belangeri
ENSSMAG00000009504	tsr1	99	55.742	ENSTTRG00000001177	TSR1	99	54.946	Tursiops_truncatus
ENSSMAG00000009504	tsr1	99	55.260	ENSUAMG00000025160	TSR1	99	53.524	Ursus_americanus
ENSSMAG00000009504	tsr1	96	54.851	ENSUMAG00000009294	TSR1	98	52.812	Ursus_maritimus
ENSSMAG00000009504	tsr1	83	50.642	ENSVPAG00000000228	TSR1	99	47.949	Vicugna_pacos
ENSSMAG00000009504	tsr1	99	54.447	ENSVVUG00000021767	TSR1	99	52.524	Vulpes_vulpes
ENSSMAG00000009504	tsr1	100	52.432	ENSXETG00000023797	tsr1	100	51.127	Xenopus_tropicalis
ENSSMAG00000009504	tsr1	100	80.695	ENSXCOG00000009635	tsr1	100	80.576	Xiphophorus_couchianus
ENSSMAG00000009504	tsr1	100	81.055	ENSXMAG00000001397	tsr1	97	80.336	Xiphophorus_maculatus