EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000009596 (Gene tree)
Gene ID: -
Gene Symbol: vars
Alias: CHUNP6879|im:7137378|vars2|wu:fb07a11|wu:fb07d10
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 10327 bases
Position: chr1:17335544-17345870
Accession: ZDB-GENE-010601-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015714	tRNA-synt_1g	PF09334.11	3.9e-12	1	1
ENSSMAP00000015714	Anticodon_1	PF08264.13	1.6e-33	1	1
ENSSMAP00000015714	tRNA-synt_1	PF00133.22	2.6e-207	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015913	-	3930	-	ENSSMAP00000015714	1281 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009596's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009596's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000009596	vars	77	48.111	ENSSMAG00000020842	vars2	92	48.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009596	vars	99	63.460	ENSG00000204394	VARS	99	70.245	Homo_sapiens
ENSSMAG00000009596	vars	94	90.373	ENSAPOG00000020691	vars	96	90.373	Acanthochromis_polyacanthus
ENSSMAG00000009596	vars	94	90.373	ENSAPOG00000020921	vars	96	90.373	Acanthochromis_polyacanthus
ENSSMAG00000009596	vars	99	63.721	ENSAMEG00000006417	VARS	100	63.749	Ailuropoda_melanoleuca
ENSSMAG00000009596	vars	99	87.891	ENSACIG00000013752	vars	100	87.891	Amphilophus_citrinellus
ENSSMAG00000009596	vars	99	90.055	ENSAOCG00000002447	vars	99	90.055	Amphiprion_ocellaris
ENSSMAG00000009596	vars	99	89.977	ENSAPEG00000010638	vars	99	89.977	Amphiprion_percula
ENSSMAG00000009596	vars	99	84.922	ENSATEG00000020219	vars	100	84.922	Anabas_testudineus
ENSSMAG00000009596	vars	90	70.380	ENSACAG00000029133	-	99	70.380	Anolis_carolinensis
ENSSMAG00000009596	vars	99	63.382	ENSANAG00000015453	VARS	100	63.545	Aotus_nancymaae
ENSSMAG00000009596	vars	99	89.437	ENSACLG00000025699	vars	97	89.437	Astatotilapia_calliptera
ENSSMAG00000009596	vars	96	79.038	ENSAMXG00000017716	vars	96	79.038	Astyanax_mexicanus
ENSSMAG00000009596	vars	99	63.926	ENSBTAG00000005631	VARS	100	64.087	Bos_taurus
ENSSMAG00000009596	vars	99	63.305	ENSCJAG00000002604	VARS	100	63.467	Callithrix_jacchus
ENSSMAG00000009596	vars	99	63.460	ENSCAFG00000000636	VARS	100	63.411	Canis_familiaris
ENSSMAG00000009596	vars	93	64.599	ENSCAFG00020020790	VARS	96	64.545	Canis_lupus_dingo
ENSSMAG00000009596	vars	99	63.538	ENSCHIG00000011008	VARS	100	63.700	Capra_hircus
ENSSMAG00000009596	vars	99	63.150	ENSTSYG00000001567	VARS	100	63.235	Carlito_syrichta
ENSSMAG00000009596	vars	90	66.867	ENSCAPG00000013736	VARS	98	66.466	Cavia_aperea
ENSSMAG00000009596	vars	99	63.284	ENSCPOG00000000870	VARS	100	62.771	Cavia_porcellus
ENSSMAG00000009596	vars	99	63.538	ENSCCAG00000035656	VARS	100	63.333	Cebus_capucinus
ENSSMAG00000009596	vars	99	63.594	ENSCATG00000022394	VARS	100	63.854	Cercocebus_atys
ENSSMAG00000009596	vars	92	63.154	ENSCLAG00000009470	VARS	97	62.500	Chinchilla_lanigera
ENSSMAG00000009596	vars	99	63.362	ENSCSAG00000008784	VARS	100	63.622	Chlorocebus_sabaeus
ENSSMAG00000009596	vars	76	73.824	ENSCPBG00000007943	VARS	96	73.824	Chrysemys_picta_bellii
ENSSMAG00000009596	vars	99	63.517	ENSCANG00000033570	VARS	100	63.777	Colobus_angolensis_palliatus
ENSSMAG00000009596	vars	99	63.305	ENSCGRG00001005686	Vars	100	63.622	Cricetulus_griseus_chok1gshd
ENSSMAG00000009596	vars	93	61.526	ENSCGRG00000013352	Vars	78	61.866	Cricetulus_griseus_crigri
ENSSMAG00000009596	vars	99	82.864	ENSCSEG00000019652	vars	100	82.864	Cynoglossus_semilaevis
ENSSMAG00000009596	vars	99	88.498	ENSCVAG00000022398	vars	100	88.498	Cyprinodon_variegatus
ENSSMAG00000009596	vars	99	83.007	ENSDARG00000044575	vars	100	83.007	Danio_rerio
ENSSMAG00000009596	vars	85	67.327	ENSDORG00000016433	Vars	99	67.235	Dipodomys_ordii
ENSSMAG00000009596	vars	68	72.514	ENSETEG00000003824	VARS	77	72.514	Echinops_telfairi
ENSSMAG00000009596	vars	51	71.577	ENSEBUG00000007086	vars	82	71.577	Eptatretus_burgeri
ENSSMAG00000009596	vars	57	63.973	ENSEBUG00000004637	vars	100	63.973	Eptatretus_burgeri
ENSSMAG00000009596	vars	99	63.770	ENSEASG00005015673	VARS	100	64.009	Equus_asinus_asinus
ENSSMAG00000009596	vars	99	63.721	ENSECAG00000014620	VARS	100	63.882	Equus_caballus
ENSSMAG00000009596	vars	71	70.175	ENSEEUG00000004116	VARS	73	70.175	Erinaceus_europaeus
ENSSMAG00000009596	vars	99	82.866	ENSELUG00000006550	vars	97	82.982	Esox_lucius
ENSSMAG00000009596	vars	99	63.770	ENSFCAG00000004510	VARS	100	63.854	Felis_catus
ENSSMAG00000009596	vars	83	68.966	ENSFDAG00000011401	VARS	100	68.670	Fukomys_damarensis
ENSSMAG00000009596	vars	99	87.637	ENSFHEG00000010672	vars	100	87.637	Fundulus_heteroclitus
ENSSMAG00000009596	vars	99	81.606	ENSGMOG00000014908	vars	100	81.684	Gadus_morhua
ENSSMAG00000009596	vars	99	88.341	ENSGAFG00000021630	vars	100	88.263	Gambusia_affinis
ENSSMAG00000009596	vars	93	89.337	ENSGACG00000009601	vars	100	85.591	Gasterosteus_aculeatus
ENSSMAG00000009596	vars	50	59.253	ENSGAGG00000006508	-	91	58.787	Gopherus_agassizii
ENSSMAG00000009596	vars	99	63.848	ENSGGOG00000011364	VARS	100	63.854	Gorilla_gorilla
ENSSMAG00000009596	vars	99	89.593	ENSHBUG00000017151	vars	97	89.593	Haplochromis_burtoni
ENSSMAG00000009596	vars	99	63.354	ENSHGLG00000011646	VARS	100	63.276	Heterocephalus_glaber_female
ENSSMAG00000009596	vars	93	60.377	ENSHGLG00100018062	VARS	99	60.345	Heterocephalus_glaber_male
ENSSMAG00000009596	vars	99	83.386	ENSHCOG00000012198	vars	99	83.386	Hippocampus_comes
ENSSMAG00000009596	vars	99	82.017	ENSIPUG00000005218	vars	100	81.783	Ictalurus_punctatus
ENSSMAG00000009596	vars	99	63.926	ENSSTOG00000013112	VARS	100	63.777	Ictidomys_tridecemlineatus
ENSSMAG00000009596	vars	99	51.794	ENSJJAG00000015343	-	100	51.603	Jaculus_jaculus
ENSSMAG00000009596	vars	99	63.333	ENSJJAG00000019749	-	100	62.937	Jaculus_jaculus
ENSSMAG00000009596	vars	99	84.417	ENSKMAG00000009455	vars	100	84.730	Kryptolebias_marmoratus
ENSSMAG00000009596	vars	99	85.278	ENSLBEG00000010341	vars	99	85.278	Labrus_bergylta
ENSSMAG00000009596	vars	94	65.930	ENSLACG00000015232	VARS	99	65.957	Latimeria_chalumnae
ENSSMAG00000009596	vars	99	73.552	ENSLOCG00000004240	vars	100	73.865	Lepisosteus_oculatus
ENSSMAG00000009596	vars	99	63.432	ENSLAFG00000023090	VARS	100	63.432	Loxodonta_africana
ENSSMAG00000009596	vars	99	63.439	ENSMFAG00000001032	VARS	100	63.700	Macaca_fascicularis
ENSSMAG00000009596	vars	99	63.439	ENSMMUG00000006828	VARS	100	63.700	Macaca_mulatta
ENSSMAG00000009596	vars	99	63.439	ENSMNEG00000042072	VARS	100	63.700	Macaca_nemestrina
ENSSMAG00000009596	vars	99	63.517	ENSMLEG00000039307	VARS	100	63.777	Mandrillus_leucophaeus
ENSSMAG00000009596	vars	99	89.428	ENSMAMG00000003949	vars	100	89.428	Mastacembelus_armatus
ENSSMAG00000009596	vars	99	89.437	ENSMZEG00005018327	vars	97	89.437	Maylandia_zebra
ENSSMAG00000009596	vars	99	63.460	ENSMAUG00000006715	Vars	100	63.700	Mesocricetus_auratus
ENSSMAG00000009596	vars	99	63.460	ENSMICG00000003548	VARS	100	63.158	Microcebus_murinus
ENSSMAG00000009596	vars	99	62.422	ENSMOCG00000015404	Vars	100	62.267	Microtus_ochrogaster
ENSSMAG00000009596	vars	99	84.886	ENSMMOG00000015801	vars	100	84.573	Mola_mola
ENSSMAG00000009596	vars	99	64.701	ENSMODG00000015204	-	100	64.628	Monodelphis_domestica
ENSSMAG00000009596	vars	99	89.812	ENSMALG00000022532	vars	99	89.812	Monopterus_albus
ENSSMAG00000009596	vars	99	64.053	MGP_CAROLIEiJ_G0021491	Vars	100	63.975	Mus_caroli
ENSSMAG00000009596	vars	99	64.053	ENSMUSG00000007029	Vars	100	64.053	Mus_musculus
ENSSMAG00000009596	vars	99	63.975	MGP_PahariEiJ_G0020486	Vars	100	63.898	Mus_pahari
ENSSMAG00000009596	vars	99	64.130	MGP_SPRETEiJ_G0022396	Vars	100	64.130	Mus_spretus
ENSSMAG00000009596	vars	99	63.305	ENSMPUG00000010821	VARS	100	63.333	Mustela_putorius_furo
ENSSMAG00000009596	vars	78	66.534	ENSMLUG00000013126	VARS	100	66.534	Myotis_lucifugus
ENSSMAG00000009596	vars	99	63.587	ENSNGAG00000012151	Vars	100	63.848	Nannospalax_galili
ENSSMAG00000009596	vars	99	89.280	ENSNBRG00000020520	vars	100	89.280	Neolamprologus_brichardi
ENSSMAG00000009596	vars	99	63.615	ENSNLEG00000006351	VARS	100	63.777	Nomascus_leucogenys
ENSSMAG00000009596	vars	99	62.267	ENSMEUG00000011378	VARS	95	71.457	Notamacropus_eugenii
ENSSMAG00000009596	vars	99	63.460	ENSOPRG00000003607	VARS	100	63.777	Ochotona_princeps
ENSSMAG00000009596	vars	99	63.121	ENSODEG00000017681	VARS	100	62.966	Octodon_degus
ENSSMAG00000009596	vars	99	88.318	ENSONIG00000013064	vars	100	90.261	Oreochromis_niloticus
ENSSMAG00000009596	vars	77	66.197	ENSOANG00000005400	VARS	98	66.197	Ornithorhynchus_anatinus
ENSSMAG00000009596	vars	99	62.189	ENSOCUG00000022463	VARS	100	62.210	Oryctolagus_cuniculus
ENSSMAG00000009596	vars	99	86.604	ENSORLG00000013063	vars	100	86.526	Oryzias_latipes
ENSSMAG00000009596	vars	99	87.246	ENSORLG00020003504	vars	100	87.089	Oryzias_latipes_hni
ENSSMAG00000009596	vars	99	87.549	ENSORLG00015009001	vars	100	87.549	Oryzias_latipes_hsok
ENSSMAG00000009596	vars	99	88.019	ENSOMEG00000015016	vars	100	88.019	Oryzias_melastigma
ENSSMAG00000009596	vars	99	63.272	ENSOGAG00000007515	VARS	100	63.194	Otolemur_garnettii
ENSSMAG00000009596	vars	99	63.460	ENSPPAG00000034012	VARS	100	63.622	Pan_paniscus
ENSSMAG00000009596	vars	99	63.770	ENSPPRG00000014855	VARS	100	63.854	Panthera_pardus
ENSSMAG00000009596	vars	85	67.704	ENSPTIG00000010462	VARS	93	67.698	Panthera_tigris_altaica
ENSSMAG00000009596	vars	99	63.382	ENSPTRG00000017985	VARS	100	63.545	Pan_troglodytes
ENSSMAG00000009596	vars	99	62.202	ENSPANG00000014565	VARS	100	62.462	Papio_anubis
ENSSMAG00000009596	vars	99	79.984	ENSPKIG00000016304	vars	100	79.907	Paramormyrops_kingsleyae
ENSSMAG00000009596	vars	99	83.242	ENSPMGG00000023909	vars	100	83.242	Periophthalmus_magnuspinnatus
ENSSMAG00000009596	vars	99	63.305	ENSPEMG00000006639	Vars	100	63.467	Peromyscus_maniculatus_bairdii
ENSSMAG00000009596	vars	99	64.158	ENSPCIG00000018553	VARS	100	64.241	Phascolarctos_cinereus
ENSSMAG00000009596	vars	99	88.263	ENSPFOG00000015690	vars	100	88.185	Poecilia_formosa
ENSSMAG00000009596	vars	99	88.106	ENSPLAG00000009590	vars	100	88.028	Poecilia_latipinna
ENSSMAG00000009596	vars	99	88.185	ENSPMEG00000004708	vars	100	88.106	Poecilia_mexicana
ENSSMAG00000009596	vars	99	83.020	ENSPREG00000013264	vars	97	90.339	Poecilia_reticulata
ENSSMAG00000009596	vars	99	62.219	ENSPPYG00000016460	VARS	100	62.016	Pongo_abelii
ENSSMAG00000009596	vars	86	64.476	ENSPCAG00000013565	VARS	86	64.476	Procavia_capensis
ENSSMAG00000009596	vars	99	63.411	ENSPCOG00000010942	VARS	100	63.418	Propithecus_coquereli
ENSSMAG00000009596	vars	99	61.348	ENSPVAG00000012403	VARS	100	61.146	Pteropus_vampyrus
ENSSMAG00000009596	vars	99	89.593	ENSPNYG00000022511	vars	100	89.593	Pundamilia_nyererei
ENSSMAG00000009596	vars	99	82.826	ENSPNAG00000020962	vars	100	82.697	Pygocentrus_nattereri
ENSSMAG00000009596	vars	99	63.848	ENSRNOG00000000867	Vars	100	63.854	Rattus_norvegicus
ENSSMAG00000009596	vars	99	63.439	ENSRBIG00000041669	VARS	100	63.700	Rhinopithecus_bieti
ENSSMAG00000009596	vars	99	63.439	ENSRROG00000045490	VARS	100	63.700	Rhinopithecus_roxellana
ENSSMAG00000009596	vars	99	63.227	ENSSBOG00000035402	VARS	100	63.390	Saimiri_boliviensis_boliviensis
ENSSMAG00000009596	vars	99	62.766	ENSSHAG00000006937	VARS	100	63.158	Sarcophilus_harrisii
ENSSMAG00000009596	vars	95	83.638	ENSSFOG00015014272	vars	98	83.638	Scleropages_formosus
ENSSMAG00000009596	vars	99	92.169	ENSSDUG00000014177	vars	100	92.169	Seriola_dumerili
ENSSMAG00000009596	vars	99	91.934	ENSSLDG00000025316	vars	100	91.934	Seriola_lalandi_dorsalis
ENSSMAG00000009596	vars	99	90.368	ENSSPAG00000017068	vars	100	90.368	Stegastes_partitus
ENSSMAG00000009596	vars	99	63.178	ENSSSCG00000038950	VARS	100	63.109	Sus_scrofa
ENSSMAG00000009596	vars	82	80.857	ENSTRUG00000012307	vars	98	80.703	Takifugu_rubripes
ENSSMAG00000009596	vars	99	84.988	ENSTNIG00000008011	vars	100	84.988	Tetraodon_nigroviridis
ENSSMAG00000009596	vars	99	57.686	ENSTTRG00000014128	VARS	100	57.609	Tursiops_truncatus
ENSSMAG00000009596	vars	99	62.074	ENSUAMG00000010424	VARS	100	62.189	Ursus_americanus
ENSSMAG00000009596	vars	99	58.942	ENSUMAG00000013486	VARS	100	59.098	Ursus_maritimus
ENSSMAG00000009596	vars	99	63.672	ENSVVUG00000021323	VARS	100	63.264	Vulpes_vulpes
ENSSMAG00000009596	vars	99	63.158	ENSXETG00000024076	vars	100	63.003	Xenopus_tropicalis
ENSSMAG00000009596	vars	99	85.759	ENSXCOG00000019172	vars	100	85.759	Xiphophorus_couchianus
ENSSMAG00000009596	vars	99	88.341	ENSXMAG00000010927	vars	100	88.263	Xiphophorus_maculatus