EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000009651 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-11k18.4
Alias: -
Full Name: si:ch211-11k18.4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 7673 bases
Position: chr19:8618060-8625732
Accession: ZDB-GENE-070912-22
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015734	MMR_HSR1	PF01926.23	1.1e-05	1	1
ENSSMAP00000015751	MMR_HSR1	PF01926.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000015949	-	2160	-	ENSSMAP00000015751	451 (aa)	-	A0A2U9CQ70
ENSSMAT00000015932	-	4181	-	ENSSMAP00000015734	451 (aa)	-	A0A2U9CQ70

Gene Model

Click here to download ENSSMAG00000009651's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009651's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000009651	si:ch211-11k18.4	99	58.667	ENSSMAG00000011905	si:dkey-98f17.5	100	58.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009651	si:ch211-11k18.4	100	91.574	ENSAPOG00000018833	si:ch211-11k18.4	100	91.574	Acanthochromis_polyacanthus
ENSSMAG00000009651	si:ch211-11k18.4	99	59.333	ENSAPOG00000010378	si:dkey-98f17.5	100	59.333	Acanthochromis_polyacanthus
ENSSMAG00000009651	si:ch211-11k18.4	99	58.889	ENSACIG00000017719	si:dkey-98f17.5	100	58.889	Amphilophus_citrinellus
ENSSMAG00000009651	si:ch211-11k18.4	99	87.333	ENSACIG00000006696	si:ch211-11k18.4	99	87.333	Amphilophus_citrinellus
ENSSMAG00000009651	si:ch211-11k18.4	100	92.239	ENSAOCG00000014284	si:ch211-11k18.4	100	92.239	Amphiprion_ocellaris
ENSSMAG00000009651	si:ch211-11k18.4	99	59.556	ENSAOCG00000008661	si:dkey-98f17.5	100	59.556	Amphiprion_ocellaris
ENSSMAG00000009651	si:ch211-11k18.4	100	92.018	ENSAPEG00000014910	si:ch211-11k18.4	100	92.018	Amphiprion_percula
ENSSMAG00000009651	si:ch211-11k18.4	99	59.556	ENSAPEG00000022447	si:dkey-98f17.5	100	59.556	Amphiprion_percula
ENSSMAG00000009651	si:ch211-11k18.4	100	90.022	ENSATEG00000004775	si:ch211-11k18.4	100	90.022	Anabas_testudineus
ENSSMAG00000009651	si:ch211-11k18.4	99	59.778	ENSATEG00000007188	si:dkey-98f17.5	100	59.778	Anabas_testudineus
ENSSMAG00000009651	si:ch211-11k18.4	98	65.471	ENSACAG00000028632	-	98	65.471	Anolis_carolinensis
ENSSMAG00000009651	si:ch211-11k18.4	100	89.800	ENSACLG00000007907	si:ch211-11k18.4	100	89.800	Astatotilapia_calliptera
ENSSMAG00000009651	si:ch211-11k18.4	99	59.333	ENSACLG00000001308	si:dkey-98f17.5	100	59.333	Astatotilapia_calliptera
ENSSMAG00000009651	si:ch211-11k18.4	99	82.000	ENSAMXG00000017817	si:ch211-11k18.4	100	82.000	Astyanax_mexicanus
ENSSMAG00000009651	si:ch211-11k18.4	99	58.889	ENSAMXG00000001190	si:dkey-98f17.5	100	58.889	Astyanax_mexicanus
ENSSMAG00000009651	si:ch211-11k18.4	83	60.477	ENSCING00000020807	-	99	60.477	Ciona_intestinalis
ENSSMAG00000009651	si:ch211-11k18.4	99	56.889	ENSCSAVG00000009987	-	100	56.889	Ciona_savignyi
ENSSMAG00000009651	si:ch211-11k18.4	99	59.556	ENSCSEG00000017512	si:dkey-98f17.5	95	60.976	Cynoglossus_semilaevis
ENSSMAG00000009651	si:ch211-11k18.4	100	84.701	ENSCSEG00000017661	si:ch211-11k18.4	100	84.701	Cynoglossus_semilaevis
ENSSMAG00000009651	si:ch211-11k18.4	99	60.000	ENSCVAG00000011351	si:dkey-98f17.5	100	60.000	Cyprinodon_variegatus
ENSSMAG00000009651	si:ch211-11k18.4	100	88.248	ENSCVAG00000015346	si:ch211-11k18.4	100	88.248	Cyprinodon_variegatus
ENSSMAG00000009651	si:ch211-11k18.4	98	59.184	ENSDARG00000068863	si:dkey-98f17.5	100	59.184	Danio_rerio
ENSSMAG00000009651	si:ch211-11k18.4	99	82.000	ENSDARG00000087869	si:ch211-11k18.4	100	87.245	Danio_rerio
ENSSMAG00000009651	si:ch211-11k18.4	80	58.287	ENSEBUG00000007620	si:dkey-98f17.5	97	58.287	Eptatretus_burgeri
ENSSMAG00000009651	si:ch211-11k18.4	99	58.000	ENSELUG00000003365	si:dkey-98f17.5	100	58.222	Esox_lucius
ENSSMAG00000009651	si:ch211-11k18.4	99	59.778	ENSFHEG00000012744	si:dkey-98f17.5	100	59.778	Fundulus_heteroclitus
ENSSMAG00000009651	si:ch211-11k18.4	100	86.475	ENSFHEG00000019820	si:ch211-11k18.4	100	86.475	Fundulus_heteroclitus
ENSSMAG00000009651	si:ch211-11k18.4	90	78.713	ENSGMOG00000003492	si:ch211-11k18.4	100	78.713	Gadus_morhua
ENSSMAG00000009651	si:ch211-11k18.4	100	85.588	ENSGAFG00000005677	si:ch211-11k18.4	100	85.588	Gambusia_affinis
ENSSMAG00000009651	si:ch211-11k18.4	99	59.556	ENSGAFG00000012362	si:dkey-98f17.5	89	59.556	Gambusia_affinis
ENSSMAG00000009651	si:ch211-11k18.4	58	73.462	ENSGACG00000009399	si:dkey-98f17.5	100	73.462	Gasterosteus_aculeatus
ENSSMAG00000009651	si:ch211-11k18.4	90	88.119	ENSGACG00000013134	si:ch211-11k18.4	100	88.119	Gasterosteus_aculeatus
ENSSMAG00000009651	si:ch211-11k18.4	100	90.022	ENSHBUG00000020638	si:ch211-11k18.4	100	90.022	Haplochromis_burtoni
ENSSMAG00000009651	si:ch211-11k18.4	99	59.556	ENSHBUG00000008331	si:dkey-98f17.5	100	59.556	Haplochromis_burtoni
ENSSMAG00000009651	si:ch211-11k18.4	99	57.399	ENSHCOG00000016505	si:dkey-98f17.5	98	57.399	Hippocampus_comes
ENSSMAG00000009651	si:ch211-11k18.4	99	86.222	ENSHCOG00000014773	si:ch211-11k18.4	100	86.222	Hippocampus_comes
ENSSMAG00000009651	si:ch211-11k18.4	96	75.926	ENSIPUG00000016678	si:ch211-11k18.4	99	76.157	Ictalurus_punctatus
ENSSMAG00000009651	si:ch211-11k18.4	90	67.822	ENSIPUG00000016694	si:ch211-11k18.4	85	69.171	Ictalurus_punctatus
ENSSMAG00000009651	si:ch211-11k18.4	99	56.858	ENSIPUG00000019981	si:dkey-98f17.5	100	56.858	Ictalurus_punctatus
ENSSMAG00000009651	si:ch211-11k18.4	99	58.889	ENSKMAG00000014997	si:dkey-98f17.5	100	58.444	Kryptolebias_marmoratus
ENSSMAG00000009651	si:ch211-11k18.4	99	87.556	ENSKMAG00000009327	si:ch211-11k18.4	99	87.556	Kryptolebias_marmoratus
ENSSMAG00000009651	si:ch211-11k18.4	99	59.111	ENSLBEG00000012756	si:dkey-98f17.5	100	59.111	Labrus_bergylta
ENSSMAG00000009651	si:ch211-11k18.4	99	69.845	ENSLACG00000006280	si:ch211-11k18.4	100	69.845	Latimeria_chalumnae
ENSSMAG00000009651	si:ch211-11k18.4	99	61.915	ENSLACG00000004899	-	99	61.915	Latimeria_chalumnae
ENSSMAG00000009651	si:ch211-11k18.4	98	60.497	ENSLACG00000017433	si:dkey-98f17.5	97	60.497	Latimeria_chalumnae
ENSSMAG00000009651	si:ch211-11k18.4	99	57.871	ENSLOCG00000003824	si:dkey-98f17.5	99	57.871	Lepisosteus_oculatus
ENSSMAG00000009651	si:ch211-11k18.4	99	59.778	ENSMAMG00000014528	si:dkey-98f17.5	100	59.778	Mastacembelus_armatus
ENSSMAG00000009651	si:ch211-11k18.4	96	91.204	ENSMAMG00000002536	si:ch211-11k18.4	99	91.204	Mastacembelus_armatus
ENSSMAG00000009651	si:ch211-11k18.4	99	59.556	ENSMZEG00005016572	si:dkey-98f17.5	100	59.556	Maylandia_zebra
ENSSMAG00000009651	si:ch211-11k18.4	100	89.579	ENSMZEG00005008941	si:ch211-11k18.4	100	89.579	Maylandia_zebra
ENSSMAG00000009651	si:ch211-11k18.4	100	82.040	ENSMMOG00000012485	si:ch211-11k18.4	100	82.040	Mola_mola
ENSSMAG00000009651	si:ch211-11k18.4	100	88.914	ENSMALG00000019735	si:ch211-11k18.4	100	88.914	Monopterus_albus
ENSSMAG00000009651	si:ch211-11k18.4	98	60.227	ENSMALG00000012761	si:dkey-98f17.5	100	60.682	Monopterus_albus
ENSSMAG00000009651	si:ch211-11k18.4	96	90.046	ENSNBRG00000002220	si:ch211-11k18.4	98	90.046	Neolamprologus_brichardi
ENSSMAG00000009651	si:ch211-11k18.4	99	59.465	ENSNBRG00000006068	si:dkey-98f17.5	100	59.465	Neolamprologus_brichardi
ENSSMAG00000009651	si:ch211-11k18.4	100	89.135	ENSONIG00000019412	si:ch211-11k18.4	100	89.135	Oreochromis_niloticus
ENSSMAG00000009651	si:ch211-11k18.4	99	59.778	ENSONIG00000013568	si:dkey-98f17.5	100	59.778	Oreochromis_niloticus
ENSSMAG00000009651	si:ch211-11k18.4	91	60.000	ENSORLG00000007958	si:dkey-98f17.5	95	60.000	Oryzias_latipes
ENSSMAG00000009651	si:ch211-11k18.4	100	85.366	ENSORLG00000012015	si:ch211-11k18.4	100	85.366	Oryzias_latipes
ENSSMAG00000009651	si:ch211-11k18.4	100	84.922	ENSORLG00020012386	si:ch211-11k18.4	100	84.922	Oryzias_latipes_hni
ENSSMAG00000009651	si:ch211-11k18.4	99	58.667	ENSORLG00020013350	si:dkey-98f17.5	100	58.667	Oryzias_latipes_hni
ENSSMAG00000009651	si:ch211-11k18.4	99	58.667	ENSORLG00015002000	si:dkey-98f17.5	100	58.667	Oryzias_latipes_hsok
ENSSMAG00000009651	si:ch211-11k18.4	100	85.366	ENSORLG00015022862	si:ch211-11k18.4	100	85.366	Oryzias_latipes_hsok
ENSSMAG00000009651	si:ch211-11k18.4	100	86.475	ENSOMEG00000018686	si:ch211-11k18.4	100	86.475	Oryzias_melastigma
ENSSMAG00000009651	si:ch211-11k18.4	99	58.667	ENSOMEG00000003154	si:dkey-98f17.5	100	58.667	Oryzias_melastigma
ENSSMAG00000009651	si:ch211-11k18.4	99	79.111	ENSPKIG00000018807	si:ch211-11k18.4	100	79.111	Paramormyrops_kingsleyae
ENSSMAG00000009651	si:ch211-11k18.4	99	76.000	ENSPKIG00000023918	-	98	76.000	Paramormyrops_kingsleyae
ENSSMAG00000009651	si:ch211-11k18.4	99	59.424	ENSPKIG00000024621	si:dkey-98f17.5	100	59.424	Paramormyrops_kingsleyae
ENSSMAG00000009651	si:ch211-11k18.4	99	59.111	ENSPMGG00000019065	si:dkey-98f17.5	100	59.111	Periophthalmus_magnuspinnatus
ENSSMAG00000009651	si:ch211-11k18.4	100	87.361	ENSPMGG00000016507	si:ch211-11k18.4	100	87.361	Periophthalmus_magnuspinnatus
ENSSMAG00000009651	si:ch211-11k18.4	100	87.361	ENSPFOG00000007976	si:ch211-11k18.4	100	87.361	Poecilia_formosa
ENSSMAG00000009651	si:ch211-11k18.4	99	59.382	ENSPFOG00000015142	si:dkey-98f17.5	100	59.382	Poecilia_formosa
ENSSMAG00000009651	si:ch211-11k18.4	100	87.361	ENSPLAG00000019794	si:ch211-11k18.4	100	87.361	Poecilia_latipinna
ENSSMAG00000009651	si:ch211-11k18.4	99	59.556	ENSPLAG00000003709	si:dkey-98f17.5	100	59.556	Poecilia_latipinna
ENSSMAG00000009651	si:ch211-11k18.4	99	59.333	ENSPMEG00000018709	si:dkey-98f17.5	94	59.333	Poecilia_mexicana
ENSSMAG00000009651	si:ch211-11k18.4	100	87.140	ENSPMEG00000024198	si:ch211-11k18.4	100	87.140	Poecilia_mexicana
ENSSMAG00000009651	si:ch211-11k18.4	89	86.035	ENSPREG00000015319	si:ch211-11k18.4	92	86.035	Poecilia_reticulata
ENSSMAG00000009651	si:ch211-11k18.4	98	59.545	ENSPREG00000000708	si:dkey-98f17.5	100	59.545	Poecilia_reticulata
ENSSMAG00000009651	si:ch211-11k18.4	99	59.556	ENSPNYG00000017266	si:dkey-98f17.5	100	59.556	Pundamilia_nyererei
ENSSMAG00000009651	si:ch211-11k18.4	100	89.800	ENSPNYG00000017099	si:ch211-11k18.4	100	89.800	Pundamilia_nyererei
ENSSMAG00000009651	si:ch211-11k18.4	99	83.964	ENSPNAG00000022138	si:ch211-11k18.4	99	83.964	Pygocentrus_nattereri
ENSSMAG00000009651	si:ch211-11k18.4	99	58.444	ENSPNAG00000021352	si:dkey-98f17.5	100	58.444	Pygocentrus_nattereri
ENSSMAG00000009651	si:ch211-11k18.4	99	57.930	ENSSFOG00015017965	si:dkey-98f17.5	100	57.837	Scleropages_formosus
ENSSMAG00000009651	si:ch211-11k18.4	99	75.947	ENSSFOG00015000985	si:ch211-11k18.4	94	75.947	Scleropages_formosus
ENSSMAG00000009651	si:ch211-11k18.4	100	92.905	ENSSDUG00000016411	si:ch211-11k18.4	100	92.905	Seriola_dumerili
ENSSMAG00000009651	si:ch211-11k18.4	98	58.427	ENSSDUG00000013457	si:dkey-98f17.5	99	58.427	Seriola_dumerili
ENSSMAG00000009651	si:ch211-11k18.4	100	92.461	ENSSLDG00000019145	si:ch211-11k18.4	100	92.461	Seriola_lalandi_dorsalis
ENSSMAG00000009651	si:ch211-11k18.4	98	58.202	ENSSLDG00000025395	si:dkey-98f17.5	99	58.202	Seriola_lalandi_dorsalis
ENSSMAG00000009651	si:ch211-11k18.4	87	65.990	ENSSPUG00000010096	-	99	65.990	Sphenodon_punctatus
ENSSMAG00000009651	si:ch211-11k18.4	99	59.333	ENSSPAG00000018800	si:dkey-98f17.5	100	59.333	Stegastes_partitus
ENSSMAG00000009651	si:ch211-11k18.4	100	91.131	ENSSPAG00000010697	si:ch211-11k18.4	100	91.131	Stegastes_partitus
ENSSMAG00000009651	si:ch211-11k18.4	100	86.475	ENSTRUG00000020291	si:ch211-11k18.4	100	86.475	Takifugu_rubripes
ENSSMAG00000009651	si:ch211-11k18.4	99	58.889	ENSTRUG00000021287	si:dkey-98f17.5	100	58.889	Takifugu_rubripes
ENSSMAG00000009651	si:ch211-11k18.4	99	66.814	ENSXETG00000031783	-	99	66.814	Xenopus_tropicalis
ENSSMAG00000009651	si:ch211-11k18.4	99	59.465	ENSXCOG00000017002	si:dkey-98f17.5	100	59.465	Xiphophorus_couchianus
ENSSMAG00000009651	si:ch211-11k18.4	100	82.040	ENSXCOG00000018094	si:ch211-11k18.4	100	81.596	Xiphophorus_couchianus
ENSSMAG00000009651	si:ch211-11k18.4	100	87.805	ENSXMAG00000021235	si:ch211-11k18.4	100	87.805	Xiphophorus_maculatus
ENSSMAG00000009651	si:ch211-11k18.4	99	59.556	ENSXMAG00000007688	si:dkey-98f17.5	95	59.556	Xiphophorus_maculatus