EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000009714 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 8531 bases
Position: chr21:14830284-14838814
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015837	THRAP3_BCLAF1	PF15440.6	1.1e-28	1	1
ENSSMAP00000015816	THRAP3_BCLAF1	PF15440.6	2.1e-27	1	1
ENSSMAP00000015828	THRAP3_BCLAF1	PF15440.6	2.1e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000016026	-	1851	-	ENSSMAP00000015828	493 (aa)	-	-
ENSSMAT00000016035	-	1185	-	ENSSMAP00000015837	271 (aa)	-	-
ENSSMAT00000016014	-	2667	-	ENSSMAP00000015816	765 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009714's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009714's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009714	-	57	38.854	ENSG00000173681	BCLAF3	74	34.158	Homo_sapiens
ENSSMAG00000009714	-	92	69.955	ENSAPOG00000005256	-	100	63.910	Acanthochromis_polyacanthus
ENSSMAG00000009714	-	87	54.043	ENSACIG00000009107	zgc:112982	77	56.667	Amphilophus_citrinellus
ENSSMAG00000009714	-	92	72.197	ENSAOCG00000015540	-	100	65.789	Amphiprion_ocellaris
ENSSMAG00000009714	-	92	71.300	ENSAPEG00000005388	-	100	65.038	Amphiprion_percula
ENSSMAG00000009714	-	100	65.568	ENSATEG00000021059	-	100	58.763	Anabas_testudineus
ENSSMAG00000009714	-	100	62.162	ENSACLG00000015521	-	100	54.275	Astatotilapia_calliptera
ENSSMAG00000009714	-	78	46.429	ENSAMXG00000013954	-	62	40.719	Astyanax_mexicanus
ENSSMAG00000009714	-	55	35.570	ENSCAFG00020004575	-	53	35.570	Canis_lupus_dingo
ENSSMAG00000009714	-	94	54.310	ENSCVAG00000016438	-	96	45.850	Cyprinodon_variegatus
ENSSMAG00000009714	-	99	44.891	ENSDARG00000001829	zgc:112982	59	53.143	Danio_rerio
ENSSMAG00000009714	-	91	61.847	ENSFHEG00000006117	-	88	50.835	Fundulus_heteroclitus
ENSSMAG00000009714	-	97	58.779	ENSKMAG00000011858	-	100	56.929	Kryptolebias_marmoratus
ENSSMAG00000009714	-	99	68.462	ENSLBEG00000013509	-	100	58.915	Labrus_bergylta
ENSSMAG00000009714	-	99	69.259	ENSLBEG00000017147	-	96	68.519	Labrus_bergylta
ENSSMAG00000009714	-	100	63.235	ENSMZEG00005020613	-	100	63.235	Maylandia_zebra
ENSSMAG00000009714	-	85	47.826	ENSMMOG00000013104	zgc:112982	68	59.310	Mola_mola
ENSSMAG00000009714	-	100	66.176	ENSMALG00000017681	-	100	66.418	Monopterus_albus
ENSSMAG00000009714	-	93	57.456	ENSORLG00000003192	-	90	44.582	Oryzias_latipes
ENSSMAG00000009714	-	93	57.456	ENSORLG00020011477	-	90	44.307	Oryzias_latipes_hni
ENSSMAG00000009714	-	93	57.018	ENSORLG00015008021	-	89	44.170	Oryzias_latipes_hsok
ENSSMAG00000009714	-	100	52.768	ENSOMEG00000006057	-	90	57.082	Oryzias_melastigma
ENSSMAG00000009714	-	100	58.491	ENSPFOG00000002366	-	100	44.515	Poecilia_formosa
ENSSMAG00000009714	-	100	58.491	ENSPLAG00000011747	-	100	44.515	Poecilia_latipinna
ENSSMAG00000009714	-	100	57.736	ENSPMEG00000005281	-	100	44.260	Poecilia_mexicana
ENSSMAG00000009714	-	100	58.484	ENSPREG00000011406	-	100	43.934	Poecilia_reticulata
ENSSMAG00000009714	-	93	61.024	ENSPNYG00000024269	zgc:112982	93	62.069	Pundamilia_nyererei
ENSSMAG00000009714	-	67	55.135	ENSPNAG00000021161	zgc:112982	58	48.611	Pygocentrus_nattereri
ENSSMAG00000009714	-	55	37.086	ENSRBIG00000037769	-	64	36.842	Rhinopithecus_bieti
ENSSMAG00000009714	-	99	73.643	ENSSDUG00000004371	-	98	67.490	Seriola_dumerili
ENSSMAG00000009714	-	100	74.330	ENSSLDG00000008459	-	100	72.932	Seriola_lalandi_dorsalis
ENSSMAG00000009714	-	90	68.161	ENSSPAG00000017763	-	100	60.148	Stegastes_partitus
ENSSMAG00000009714	-	90	56.855	ENSTRUG00000021930	-	92	44.300	Takifugu_rubripes
ENSSMAG00000009714	-	61	34.463	ENSUAMG00000021444	-	68	35.028	Ursus_americanus
ENSSMAG00000009714	-	100	59.846	ENSXMAG00000010229	-	100	44.076	Xiphophorus_maculatus