EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000009719 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 5263 bases
Position: chr4:11095235-11100497
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015825	RRM_1	PF00076.22	6.6e-33	1	2
ENSSMAP00000015825	RRM_1	PF00076.22	6.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000016023	-	4072	-	ENSSMAP00000015825	255 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000009719	-	67	41.969	ENSSMAG00000010899	srsf5a	74	38.627
ENSSMAG00000009719	-	78	85.000	ENSSMAG00000007018	-	78	85.000
ENSSMAG00000009719	-	66	44.444	ENSSMAG00000017447	-	50	44.444
ENSSMAG00000009719	-	78	64.824	ENSSMAG00000002039	srsf9	75	64.824
ENSSMAG00000009719	-	65	42.188	ENSSMAG00000019728	srsf5b	56	45.699

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009719	-	100	86.275	ENSG00000136450	SRSF1	100	89.231	Homo_sapiens
ENSSMAG00000009719	-	78	84.500	ENSAPOG00000002748	-	78	84.500	Acanthochromis_polyacanthus
ENSSMAG00000009719	-	80	93.137	ENSAPOG00000008542	-	81	93.137	Acanthochromis_polyacanthus
ENSSMAG00000009719	-	80	83.333	ENSAMEG00000002635	SRSF1	94	84.583	Ailuropoda_melanoleuca
ENSSMAG00000009719	-	78	85.000	ENSACIG00000008091	srsf1a	83	85.000	Amphilophus_citrinellus
ENSSMAG00000009719	-	78	85.000	ENSAOCG00000010671	-	83	85.000	Amphiprion_ocellaris
ENSSMAG00000009719	-	80	93.137	ENSAOCG00000000337	-	82	93.137	Amphiprion_ocellaris
ENSSMAG00000009719	-	78	85.000	ENSAPEG00000009915	-	83	85.000	Amphiprion_percula
ENSSMAG00000009719	-	80	93.137	ENSAPEG00000023352	-	81	93.137	Amphiprion_percula
ENSSMAG00000009719	-	78	85.000	ENSATEG00000022403	-	77	85.000	Anabas_testudineus
ENSSMAG00000009719	-	82	86.190	ENSATEG00000021567	-	81	89.706	Anabas_testudineus
ENSSMAG00000009719	-	80	86.275	ENSACAG00000005542	-	94	87.083	Anolis_carolinensis
ENSSMAG00000009719	-	100	86.275	ENSANAG00000020583	-	99	88.889	Aotus_nancymaae
ENSSMAG00000009719	-	55	78.710	ENSAMXG00000024373	-	72	74.233	Astyanax_mexicanus
ENSSMAG00000009719	-	95	88.797	ENSAMXG00000035996	srsf1a	93	89.873	Astyanax_mexicanus
ENSSMAG00000009719	-	100	86.275	ENSBTAG00000014766	SRSF1	94	87.083	Bos_taurus
ENSSMAG00000009719	-	80	79.310	ENSCJAG00000008111	-	88	80.392	Callithrix_jacchus
ENSSMAG00000009719	-	100	86.275	ENSCJAG00000041713	-	99	88.889	Callithrix_jacchus
ENSSMAG00000009719	-	100	86.275	ENSCAFG00000017430	SRSF1	92	87.083	Canis_familiaris
ENSSMAG00000009719	-	100	86.275	ENSCAFG00020025632	-	92	87.083	Canis_lupus_dingo
ENSSMAG00000009719	-	80	86.275	ENSCHIG00000010787	SRSF1	94	87.083	Capra_hircus
ENSSMAG00000009719	-	100	86.275	ENSTSYG00000013899	-	99	88.889	Carlito_syrichta
ENSSMAG00000009719	-	100	86.275	ENSCPOG00000032681	-	94	87.083	Cavia_porcellus
ENSSMAG00000009719	-	100	86.275	ENSCCAG00000029484	-	99	88.889	Cebus_capucinus
ENSSMAG00000009719	-	100	86.275	ENSCATG00000042294	-	99	88.889	Cercocebus_atys
ENSSMAG00000009719	-	100	86.275	ENSCLAG00000014707	-	94	87.083	Chinchilla_lanigera
ENSSMAG00000009719	-	100	85.490	ENSCSAG00000005642	-	92	86.250	Chlorocebus_sabaeus
ENSSMAG00000009719	-	80	86.275	ENSCHOG00000001899	SRSF1	94	87.083	Choloepus_hoffmanni
ENSSMAG00000009719	-	100	86.667	ENSCPBG00000009851	-	94	87.500	Chrysemys_picta_bellii
ENSSMAG00000009719	-	100	86.275	ENSCANG00000029726	-	99	88.889	Colobus_angolensis_palliatus
ENSSMAG00000009719	-	100	86.275	ENSCGRG00001000670	Srsf1	92	87.083	Cricetulus_griseus_chok1gshd
ENSSMAG00000009719	-	100	86.275	ENSCGRG00000005590	Srsf1	94	87.083	Cricetulus_griseus_crigri
ENSSMAG00000009719	-	78	87.000	ENSCSEG00000014272	-	78	87.500	Cynoglossus_semilaevis
ENSSMAG00000009719	-	80	87.736	ENSCSEG00000009973	-	81	87.736	Cynoglossus_semilaevis
ENSSMAG00000009719	-	78	85.000	ENSCVAG00000018617	-	78	85.000	Cyprinodon_variegatus
ENSSMAG00000009719	-	78	89.000	ENSCVAG00000005458	-	91	87.234	Cyprinodon_variegatus
ENSSMAG00000009719	-	79	87.255	ENSDARG00000057691	srsf1a	99	89.005	Danio_rerio
ENSSMAG00000009719	-	79	87.065	ENSDARG00000017843	srsf1b	79	88.060	Danio_rerio
ENSSMAG00000009719	-	100	86.275	ENSDNOG00000011737	-	92	87.083	Dasypus_novemcinctus
ENSSMAG00000009719	-	100	86.275	ENSDORG00000015082	Srsf1	94	87.083	Dipodomys_ordii
ENSSMAG00000009719	-	75	84.817	ENSETEG00000005349	-	63	86.387	Echinops_telfairi
ENSSMAG00000009719	-	100	86.275	ENSEASG00005002922	-	92	87.083	Equus_asinus_asinus
ENSSMAG00000009719	-	80	86.275	ENSECAG00000016654	SRSF1	94	87.083	Equus_caballus
ENSSMAG00000009719	-	75	85.864	ENSEEUG00000009255	-	63	87.435	Erinaceus_europaeus
ENSSMAG00000009719	-	79	86.567	ENSELUG00000021646	srsf1a	77	86.070	Esox_lucius
ENSSMAG00000009719	-	100	86.275	ENSFCAG00000002250	-	92	87.083	Felis_catus
ENSSMAG00000009719	-	75	91.852	ENSFALG00000005062	-	78	68.627	Ficedula_albicollis
ENSSMAG00000009719	-	100	86.275	ENSFDAG00000010646	-	94	87.083	Fukomys_damarensis
ENSSMAG00000009719	-	78	85.000	ENSFHEG00000003174	srsf1a	83	84.500	Fundulus_heteroclitus
ENSSMAG00000009719	-	80	82.927	ENSGMOG00000014787	-	80	82.500	Gadus_morhua
ENSSMAG00000009719	-	80	86.765	ENSGALG00000005525	SRSF1	94	87.500	Gallus_gallus
ENSSMAG00000009719	-	80	86.765	ENSGACG00000020621	srsf1b	80	86.765	Gasterosteus_aculeatus
ENSSMAG00000009719	-	100	86.667	ENSGAGG00000022965	-	92	87.500	Gopherus_agassizii
ENSSMAG00000009719	-	100	86.275	ENSGGOG00000004386	SRSF1	99	88.889	Gorilla_gorilla
ENSSMAG00000009719	-	78	85.000	ENSHBUG00000016788	srsf1a	80	85.000	Haplochromis_burtoni
ENSSMAG00000009719	-	67	86.550	ENSHGLG00000000600	-	93	87.440	Heterocephalus_glaber_female
ENSSMAG00000009719	-	67	86.550	ENSHGLG00000000669	-	93	87.440	Heterocephalus_glaber_female
ENSSMAG00000009719	-	100	86.275	ENSHGLG00100016906	-	94	87.083	Heterocephalus_glaber_male
ENSSMAG00000009719	-	78	85.500	ENSHCOG00000018918	srsf1a	77	85.000	Hippocampus_comes
ENSSMAG00000009719	-	94	88.750	ENSIPUG00000017039	srsf1a	79	90.500	Ictalurus_punctatus
ENSSMAG00000009719	-	80	86.275	ENSIPUG00000008750	srsf1b	80	87.255	Ictalurus_punctatus
ENSSMAG00000009719	-	100	86.275	ENSSTOG00000000243	-	94	87.083	Ictidomys_tridecemlineatus
ENSSMAG00000009719	-	100	86.275	ENSJJAG00000000102	-	94	87.083	Jaculus_jaculus
ENSSMAG00000009719	-	53	76.119	ENSJJAG00000014464	-	95	76.119	Jaculus_jaculus
ENSSMAG00000009719	-	78	85.500	ENSKMAG00000019232	srsf1a	78	85.500	Kryptolebias_marmoratus
ENSSMAG00000009719	-	80	84.804	ENSLBEG00000015294	-	80	87.745	Labrus_bergylta
ENSSMAG00000009719	-	78	85.000	ENSLBEG00000020864	-	83	85.000	Labrus_bergylta
ENSSMAG00000009719	-	79	84.577	ENSLACG00000014160	srsf1a	86	86.076	Latimeria_chalumnae
ENSSMAG00000009719	-	80	85.784	ENSLOCG00000005994	srsf1a	94	86.667	Lepisosteus_oculatus
ENSSMAG00000009719	-	80	86.275	ENSLAFG00000025743	SRSF1	94	87.083	Loxodonta_africana
ENSSMAG00000009719	-	100	86.275	ENSMFAG00000040003	-	99	88.889	Macaca_fascicularis
ENSSMAG00000009719	-	100	86.275	ENSMMUG00000004725	SRSF1	99	88.889	Macaca_mulatta
ENSSMAG00000009719	-	100	83.922	ENSMMUG00000003260	-	95	82.759	Macaca_mulatta
ENSSMAG00000009719	-	100	86.275	ENSMNEG00000027680	-	99	88.889	Macaca_nemestrina
ENSSMAG00000009719	-	100	83.529	ENSMNEG00000015983	-	92	84.583	Macaca_nemestrina
ENSSMAG00000009719	-	100	82.353	ENSMLEG00000015243	-	92	82.083	Mandrillus_leucophaeus
ENSSMAG00000009719	-	80	86.275	ENSMLEG00000040509	SRSF1	94	87.083	Mandrillus_leucophaeus
ENSSMAG00000009719	-	80	88.235	ENSMAMG00000019691	-	81	88.235	Mastacembelus_armatus
ENSSMAG00000009719	-	80	87.255	ENSMAMG00000019687	-	80	89.216	Mastacembelus_armatus
ENSSMAG00000009719	-	78	85.000	ENSMAMG00000018454	-	78	85.000	Mastacembelus_armatus
ENSSMAG00000009719	-	100	86.275	ENSMAUG00000021845	Srsf1	94	87.083	Mesocricetus_auratus
ENSSMAG00000009719	-	100	86.275	ENSMICG00000013639	-	99	88.889	Microcebus_murinus
ENSSMAG00000009719	-	100	86.275	ENSMOCG00000001996	Srsf1	94	87.083	Microtus_ochrogaster
ENSSMAG00000009719	-	78	85.000	ENSMMOG00000014354	srsf1a	83	85.000	Mola_mola
ENSSMAG00000009719	-	75	86.911	ENSMODG00000014781	-	63	85.864	Monodelphis_domestica
ENSSMAG00000009719	-	78	84.500	ENSMALG00000017129	-	75	84.500	Monopterus_albus
ENSSMAG00000009719	-	82	76.667	ENSMALG00000007763	-	79	75.980	Monopterus_albus
ENSSMAG00000009719	-	100	86.275	MGP_CAROLIEiJ_G0016943	Srsf1	94	87.083	Mus_caroli
ENSSMAG00000009719	-	100	86.275	ENSMUSG00000018379	Srsf1	94	87.083	Mus_musculus
ENSSMAG00000009719	-	100	86.275	MGP_PahariEiJ_G0018074	Srsf1	94	87.083	Mus_pahari
ENSSMAG00000009719	-	100	86.275	MGP_SPRETEiJ_G0017790	Srsf1	94	87.083	Mus_spretus
ENSSMAG00000009719	-	80	86.275	ENSMPUG00000015369	SRSF1	94	87.083	Mustela_putorius_furo
ENSSMAG00000009719	-	82	81.429	ENSMLUG00000023995	-	94	82.083	Myotis_lucifugus
ENSSMAG00000009719	-	80	86.275	ENSMLUG00000011040	SRSF1	94	87.083	Myotis_lucifugus
ENSSMAG00000009719	-	80	86.275	ENSNGAG00000011395	Srsf1	94	87.083	Nannospalax_galili
ENSSMAG00000009719	-	100	76.078	ENSNBRG00000008041	srsf1b	80	77.941	Neolamprologus_brichardi
ENSSMAG00000009719	-	100	86.275	ENSNLEG00000008088	-	99	88.889	Nomascus_leucogenys
ENSSMAG00000009719	-	52	82.707	ENSMEUG00000002783	-	100	81.955	Notamacropus_eugenii
ENSSMAG00000009719	-	55	84.892	ENSOPRG00000001234	-	92	86.286	Ochotona_princeps
ENSSMAG00000009719	-	99	86.220	ENSODEG00000011481	-	94	86.667	Octodon_degus
ENSSMAG00000009719	-	96	84.426	ENSONIG00000004860	-	81	87.255	Oreochromis_niloticus
ENSSMAG00000009719	-	78	85.000	ENSONIG00000013160	-	77	85.000	Oreochromis_niloticus
ENSSMAG00000009719	-	100	64.093	ENSOCUG00000010894	-	77	65.854	Oryctolagus_cuniculus
ENSSMAG00000009719	-	78	85.000	ENSORLG00000004580	srsf1a	78	85.000	Oryzias_latipes
ENSSMAG00000009719	-	78	85.000	ENSORLG00020009456	srsf1a	83	85.000	Oryzias_latipes_hni
ENSSMAG00000009719	-	78	85.000	ENSORLG00015014384	srsf1a	83	85.000	Oryzias_latipes_hsok
ENSSMAG00000009719	-	72	83.060	ENSOMEG00000004106	srsf1a	71	83.060	Oryzias_melastigma
ENSSMAG00000009719	-	84	86.977	ENSOGAG00000025950	-	94	87.083	Otolemur_garnettii
ENSSMAG00000009719	-	80	82.353	ENSOARG00000008323	SRSF1	94	84.167	Ovis_aries
ENSSMAG00000009719	-	100	86.275	ENSPPAG00000043403	-	99	88.889	Pan_paniscus
ENSSMAG00000009719	-	100	86.275	ENSPPRG00000004238	-	94	87.083	Panthera_pardus
ENSSMAG00000009719	-	100	86.275	ENSPTRG00000049077	SRSF1	99	88.889	Pan_troglodytes
ENSSMAG00000009719	-	99	67.589	ENSPANG00000030275	-	69	91.379	Papio_anubis
ENSSMAG00000009719	-	100	86.275	ENSPANG00000022305	-	99	88.889	Papio_anubis
ENSSMAG00000009719	-	80	87.745	ENSPKIG00000012857	srsf1b	80	87.745	Paramormyrops_kingsleyae
ENSSMAG00000009719	-	79	85.572	ENSPKIG00000007204	srsf1a	93	86.441	Paramormyrops_kingsleyae
ENSSMAG00000009719	-	80	80.097	ENSPSIG00000009000	-	94	81.818	Pelodiscus_sinensis
ENSSMAG00000009719	-	96	83.740	ENSPMGG00000005467	-	78	87.000	Periophthalmus_magnuspinnatus
ENSSMAG00000009719	-	78	86.500	ENSPMGG00000013112	-	79	87.000	Periophthalmus_magnuspinnatus
ENSSMAG00000009719	-	100	86.275	ENSPEMG00000021416	Srsf1	94	87.083	Peromyscus_maniculatus_bairdii
ENSSMAG00000009719	-	80	86.765	ENSPCIG00000006076	-	94	87.917	Phascolarctos_cinereus
ENSSMAG00000009719	-	80	88.725	ENSPFOG00000018325	-	70	89.000	Poecilia_formosa
ENSSMAG00000009719	-	80	88.235	ENSPLAG00000008416	srsf1b	79	89.000	Poecilia_latipinna
ENSSMAG00000009719	-	51	80.769	ENSPMEG00000020607	-	98	80.769	Poecilia_mexicana
ENSSMAG00000009719	-	80	88.235	ENSPMEG00000002388	-	79	89.000	Poecilia_mexicana
ENSSMAG00000009719	-	51	80.769	ENSPMEG00000014312	-	98	80.769	Poecilia_mexicana
ENSSMAG00000009719	-	78	85.000	ENSPREG00000009667	srsf1a	78	85.000	Poecilia_reticulata
ENSSMAG00000009719	-	100	86.275	ENSPPYG00000008240	SRSF1	94	87.083	Pongo_abelii
ENSSMAG00000009719	-	80	86.275	ENSPCAG00000005199	SRSF1	94	87.083	Procavia_capensis
ENSSMAG00000009719	-	100	86.275	ENSPCOG00000023654	-	99	88.889	Propithecus_coquereli
ENSSMAG00000009719	-	81	69.903	ENSPCOG00000025736	-	95	69.951	Propithecus_coquereli
ENSSMAG00000009719	-	53	94.286	ENSPVAG00000000519	-	69	92.453	Pteropus_vampyrus
ENSSMAG00000009719	-	80	85.784	ENSPNAG00000014601	srsf1b	80	86.275	Pygocentrus_nattereri
ENSSMAG00000009719	-	95	85.892	ENSPNAG00000022241	srsf1a	93	86.498	Pygocentrus_nattereri
ENSSMAG00000009719	-	80	86.275	ENSRNOG00000050323	Srsf1	94	87.083	Rattus_norvegicus
ENSSMAG00000009719	-	100	86.275	ENSRBIG00000034445	-	99	88.889	Rhinopithecus_bieti
ENSSMAG00000009719	-	100	86.275	ENSRROG00000041506	-	99	88.889	Rhinopithecus_roxellana
ENSSMAG00000009719	-	100	86.275	ENSSBOG00000025377	-	99	88.889	Saimiri_boliviensis_boliviensis
ENSSMAG00000009719	-	80	86.765	ENSSHAG00000002552	-	94	87.917	Sarcophilus_harrisii
ENSSMAG00000009719	-	80	87.192	ENSSFOG00015004800	srsf1a	93	87.029	Scleropages_formosus
ENSSMAG00000009719	-	78	85.000	ENSSDUG00000011303	-	83	85.000	Seriola_dumerili
ENSSMAG00000009719	-	100	73.333	ENSSDUG00000003929	-	84	79.412	Seriola_dumerili
ENSSMAG00000009719	-	80	81.463	ENSSLDG00000016868	-	78	76.585	Seriola_lalandi_dorsalis
ENSSMAG00000009719	-	78	85.000	ENSSLDG00000010543	-	78	85.000	Seriola_lalandi_dorsalis
ENSSMAG00000009719	-	95	72.016	ENSSLDG00000016895	-	78	79.897	Seriola_lalandi_dorsalis
ENSSMAG00000009719	-	75	85.864	ENSSARG00000010949	-	63	87.435	Sorex_araneus
ENSSMAG00000009719	-	100	86.667	ENSSPUG00000000804	-	92	87.500	Sphenodon_punctatus
ENSSMAG00000009719	-	80	91.388	ENSSPAG00000014152	-	81	90.909	Stegastes_partitus
ENSSMAG00000009719	-	78	85.500	ENSSPAG00000022562	-	78	85.500	Stegastes_partitus
ENSSMAG00000009719	-	100	86.275	ENSSSCG00000017626	-	94	87.083	Sus_scrofa
ENSSMAG00000009719	-	55	85.714	ENSTGUG00000008416	-	92	86.932	Taeniopygia_guttata
ENSSMAG00000009719	-	78	84.000	ENSTRUG00000003691	srsf1a	78	84.000	Takifugu_rubripes
ENSSMAG00000009719	-	78	84.000	ENSTNIG00000016223	srsf1a	77	84.000	Tetraodon_nigroviridis
ENSSMAG00000009719	-	75	84.293	ENSTBEG00000015378	-	63	85.864	Tupaia_belangeri
ENSSMAG00000009719	-	55	84.892	ENSTTRG00000007310	SRSF1	92	86.286	Tursiops_truncatus
ENSSMAG00000009719	-	80	86.275	ENSUAMG00000009858	SRSF1	94	87.083	Ursus_americanus
ENSSMAG00000009719	-	100	86.275	ENSUMAG00000000455	-	92	87.083	Ursus_maritimus
ENSSMAG00000009719	-	80	85.784	ENSVPAG00000010094	SRSF1	94	86.667	Vicugna_pacos
ENSSMAG00000009719	-	100	86.275	ENSVVUG00000011882	-	92	87.083	Vulpes_vulpes
ENSSMAG00000009719	-	80	85.784	ENSXETG00000008954	srsf1	94	86.508	Xenopus_tropicalis
ENSSMAG00000009719	-	78	85.000	ENSXMAG00000011766	srsf1a	78	85.000	Xiphophorus_maculatus