EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000009744 (Gene tree)
Gene ID: -
Gene Symbol: rbm47
Alias: si:ch211-241e15.2|wu:fj94a03
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 27958 bases
Position: chr8:10910126-10938083
Accession: ZDB-GENE-030131-9612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015951	RRM_5	PF13893.6	2.5e-06	1	1
ENSSMAP00000015905	RRM_5	PF13893.6	2.6e-06	1	1
ENSSMAP00000015890	RRM_5	PF13893.6	3.6e-06	1	1
ENSSMAP00000015876	RRM_5	PF13893.6	3.7e-06	1	1
ENSSMAP00000015895	RRM_5	PF13893.6	3.7e-06	1	1
ENSSMAP00000015951	RRM_1	PF00076.22	3e-40	1	3
ENSSMAP00000015951	RRM_1	PF00076.22	3e-40	2	3
ENSSMAP00000015951	RRM_1	PF00076.22	3e-40	3	3
ENSSMAP00000015905	RRM_1	PF00076.22	3.2e-40	1	3
ENSSMAP00000015905	RRM_1	PF00076.22	3.2e-40	2	3
ENSSMAP00000015905	RRM_1	PF00076.22	3.2e-40	3	3
ENSSMAP00000015890	RRM_1	PF00076.22	4.8e-40	1	3
ENSSMAP00000015890	RRM_1	PF00076.22	4.8e-40	2	3
ENSSMAP00000015890	RRM_1	PF00076.22	4.8e-40	3	3
ENSSMAP00000015876	RRM_1	PF00076.22	5.2e-40	1	3
ENSSMAP00000015876	RRM_1	PF00076.22	5.2e-40	2	3
ENSSMAP00000015876	RRM_1	PF00076.22	5.2e-40	3	3
ENSSMAP00000015895	RRM_1	PF00076.22	5.2e-40	1	3
ENSSMAP00000015895	RRM_1	PF00076.22	5.2e-40	2	3
ENSSMAP00000015895	RRM_1	PF00076.22	5.2e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000016088	-	2656	-	ENSSMAP00000015890	603 (aa)	-	-
ENSSMAT00000016149	-	1786	-	ENSSMAP00000015951	533 (aa)	-	-
ENSSMAT00000016093	-	2723	-	ENSSMAP00000015895	611 (aa)	-	-
ENSSMAT00000016074	-	2680	-	ENSSMAP00000015876	611 (aa)	-	-
ENSSMAT00000016104	-	1810	-	ENSSMAP00000015905	541 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000009744	rbm47	56	54.605	ENSSMAG00000002272	hnrnpr	68	46.445
ENSSMAG00000009744	rbm47	56	52.667	ENSSMAG00000009154	syncrip	65	45.913
ENSSMAG00000009744	rbm47	55	64.626	ENSSMAG00000017042	rbm46	66	65.646
ENSSMAG00000009744	rbm47	63	66.077	ENSSMAG00000013271	a1cf	90	51.718
ENSSMAG00000009744	rbm47	56	53.667	ENSSMAG00000020337	syncripl	74	47.030

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009744	rbm47	94	82.486	ENSG00000163694	RBM47	100	80.769	Homo_sapiens
ENSSMAG00000009744	rbm47	100	95.373	ENSAPOG00000011062	rbm47	100	95.373	Acanthochromis_polyacanthus
ENSSMAG00000009744	rbm47	94	82.254	ENSAMEG00000009672	RBM47	100	74.188	Ailuropoda_melanoleuca
ENSSMAG00000009744	rbm47	100	89.934	ENSACIG00000011531	rbm47	100	90.099	Amphilophus_citrinellus
ENSSMAG00000009744	rbm47	100	95.630	ENSAOCG00000022245	rbm47	100	95.630	Amphiprion_ocellaris
ENSSMAG00000009744	rbm47	100	95.630	ENSAPEG00000018304	rbm47	100	95.630	Amphiprion_percula
ENSSMAG00000009744	rbm47	100	94.937	ENSATEG00000018400	rbm47	100	93.638	Anabas_testudineus
ENSSMAG00000009744	rbm47	100	79.597	ENSAPLG00000013974	RBM47	100	73.366	Anas_platyrhynchos
ENSSMAG00000009744	rbm47	100	77.121	ENSACAG00000011833	RBM47	100	73.290	Anolis_carolinensis
ENSSMAG00000009744	rbm47	100	78.974	ENSANAG00000029440	RBM47	100	80.513	Aotus_nancymaae
ENSSMAG00000009744	rbm47	100	93.165	ENSACLG00000016902	rbm47	100	93.023	Astatotilapia_calliptera
ENSSMAG00000009744	rbm47	100	84.359	ENSAMXG00000021794	rbm47	100	85.422	Astyanax_mexicanus
ENSSMAG00000009744	rbm47	100	78.974	ENSBTAG00000002356	RBM47	100	75.738	Bos_taurus
ENSSMAG00000009744	rbm47	93	83.662	ENSCJAG00000019385	RBM47	98	79.000	Callithrix_jacchus
ENSSMAG00000009744	rbm47	93	83.003	ENSCAFG00000015898	RBM47	100	74.468	Canis_familiaris
ENSSMAG00000009744	rbm47	78	83.003	ENSCAFG00020010558	RBM47	94	79.434	Canis_lupus_dingo
ENSSMAG00000009744	rbm47	100	78.974	ENSCHIG00000026214	RBM47	100	75.738	Capra_hircus
ENSSMAG00000009744	rbm47	84	85.202	ENSTSYG00000033612	RBM47	93	84.071	Carlito_syrichta
ENSSMAG00000009744	rbm47	100	72.680	ENSCAPG00000008426	RBM47	100	70.000	Cavia_aperea
ENSSMAG00000009744	rbm47	100	78.920	ENSCPOG00000014100	RBM47	100	74.959	Cavia_porcellus
ENSSMAG00000009744	rbm47	99	53.859	ENSCCAG00000024397	-	99	54.187	Cebus_capucinus
ENSSMAG00000009744	rbm47	100	80.256	ENSCCAG00000030129	-	98	78.750	Cebus_capucinus
ENSSMAG00000009744	rbm47	94	82.486	ENSCATG00000042064	RBM47	100	80.769	Cercocebus_atys
ENSSMAG00000009744	rbm47	94	83.380	ENSCLAG00000001684	RBM47	100	75.581	Chinchilla_lanigera
ENSSMAG00000009744	rbm47	94	82.486	ENSCSAG00000017060	RBM47	100	75.122	Chlorocebus_sabaeus
ENSSMAG00000009744	rbm47	84	74.941	ENSCHOG00000011731	RBM47	88	73.799	Choloepus_hoffmanni
ENSSMAG00000009744	rbm47	100	82.051	ENSCPBG00000013831	RBM47	100	76.672	Chrysemys_picta_bellii
ENSSMAG00000009744	rbm47	94	83.427	ENSCANG00000019997	RBM47	100	80.513	Colobus_angolensis_palliatus
ENSSMAG00000009744	rbm47	100	73.913	ENSCGRG00001020102	-	99	75.578	Cricetulus_griseus_chok1gshd
ENSSMAG00000009744	rbm47	100	78.205	ENSCGRG00001000623	-	100	73.821	Cricetulus_griseus_chok1gshd
ENSSMAG00000009744	rbm47	100	76.574	ENSCGRG00000007762	-	100	73.837	Cricetulus_griseus_crigri
ENSSMAG00000009744	rbm47	100	73.657	ENSCGRG00000014760	-	99	75.321	Cricetulus_griseus_crigri
ENSSMAG00000009744	rbm47	93	93.503	ENSCSEG00000004545	rbm47	100	87.479	Cynoglossus_semilaevis
ENSSMAG00000009744	rbm47	100	91.774	ENSCVAG00000020144	rbm47	100	91.774	Cyprinodon_variegatus
ENSSMAG00000009744	rbm47	99	85.422	ENSDARG00000061985	rbm47	100	82.702	Danio_rerio
ENSSMAG00000009744	rbm47	94	83.427	ENSDNOG00000046854	RBM47	100	75.578	Dasypus_novemcinctus
ENSSMAG00000009744	rbm47	100	78.880	ENSDORG00000010144	Rbm47	100	74.230	Dipodomys_ordii
ENSSMAG00000009744	rbm47	94	80.447	ENSETEG00000009194	RBM47	100	74.188	Echinops_telfairi
ENSSMAG00000009744	rbm47	91	74.277	ENSEBUG00000011912	rbm47	95	74.277	Eptatretus_burgeri
ENSSMAG00000009744	rbm47	94	83.427	ENSEASG00005008443	RBM47	100	75.450	Equus_asinus_asinus
ENSSMAG00000009744	rbm47	94	83.427	ENSECAG00000004400	RBM47	100	75.450	Equus_caballus
ENSSMAG00000009744	rbm47	70	86.667	ENSEEUG00000001194	RBM47	75	80.328	Erinaceus_europaeus
ENSSMAG00000009744	rbm47	100	87.310	ENSELUG00000006148	rbm47	100	87.310	Esox_lucius
ENSSMAG00000009744	rbm47	94	82.254	ENSFCAG00000012399	RBM47	100	75.862	Felis_catus
ENSSMAG00000009744	rbm47	100	80.513	ENSFALG00000002861	RBM47	100	75.817	Ficedula_albicollis
ENSSMAG00000009744	rbm47	100	78.406	ENSFDAG00000016326	RBM47	100	74.056	Fukomys_damarensis
ENSSMAG00000009744	rbm47	100	91.392	ENSFHEG00000007938	rbm47	100	88.871	Fundulus_heteroclitus
ENSSMAG00000009744	rbm47	100	87.056	ENSGMOG00000014802	rbm47	100	83.333	Gadus_morhua
ENSSMAG00000009744	rbm47	73	80.769	ENSGALG00000014267	RBM47	100	80.818	Gallus_gallus
ENSSMAG00000009744	rbm47	73	87.339	ENSGAFG00000020571	rbm47	98	87.371	Gambusia_affinis
ENSSMAG00000009744	rbm47	100	91.774	ENSGACG00000016223	rbm47	100	91.774	Gasterosteus_aculeatus
ENSSMAG00000009744	rbm47	100	82.051	ENSGAGG00000020051	RBM47	100	76.672	Gopherus_agassizii
ENSSMAG00000009744	rbm47	94	82.486	ENSGGOG00000001367	RBM47	100	80.769	Gorilla_gorilla
ENSSMAG00000009744	rbm47	100	93.165	ENSHBUG00000003520	rbm47	100	93.023	Haplochromis_burtoni
ENSSMAG00000009744	rbm47	100	58.998	ENSHGLG00000016914	RBM47	100	74.419	Heterocephalus_glaber_female
ENSSMAG00000009744	rbm47	100	75.578	ENSHGLG00100003071	-	100	66.995	Heterocephalus_glaber_male
ENSSMAG00000009744	rbm47	100	79.434	ENSHGLG00100014028	-	100	74.419	Heterocephalus_glaber_male
ENSSMAG00000009744	rbm47	99	91.028	ENSHCOG00000002074	rbm47	99	93.059	Hippocampus_comes
ENSSMAG00000009744	rbm47	100	86.118	ENSIPUG00000004743	rbm47	100	86.118	Ictalurus_punctatus
ENSSMAG00000009744	rbm47	94	81.972	ENSSTOG00000004727	RBM47	100	80.206	Ictidomys_tridecemlineatus
ENSSMAG00000009744	rbm47	94	84.789	ENSJJAG00000013823	Rbm47	100	74.430	Jaculus_jaculus
ENSSMAG00000009744	rbm47	100	90.769	ENSKMAG00000000084	rbm47	100	92.308	Kryptolebias_marmoratus
ENSSMAG00000009744	rbm47	100	92.545	ENSLBEG00000008436	rbm47	100	92.443	Labrus_bergylta
ENSSMAG00000009744	rbm47	93	85.955	ENSLACG00000007196	RBM47	100	75.614	Latimeria_chalumnae
ENSSMAG00000009744	rbm47	93	89.802	ENSLOCG00000012966	rbm47	95	81.549	Lepisosteus_oculatus
ENSSMAG00000009744	rbm47	100	77.378	ENSLAFG00000011998	RBM47	100	74.551	Loxodonta_africana
ENSSMAG00000009744	rbm47	94	82.486	ENSMFAG00000037967	RBM47	100	80.769	Macaca_fascicularis
ENSSMAG00000009744	rbm47	94	82.486	ENSMMUG00000012036	RBM47	100	77.295	Macaca_mulatta
ENSSMAG00000009744	rbm47	94	82.486	ENSMNEG00000040774	RBM47	100	80.769	Macaca_nemestrina
ENSSMAG00000009744	rbm47	94	84.407	ENSMLEG00000041432	RBM47	100	80.851	Mandrillus_leucophaeus
ENSSMAG00000009744	rbm47	100	93.955	ENSMAMG00000019143	rbm47	100	93.830	Mastacembelus_armatus
ENSSMAG00000009744	rbm47	100	93.165	ENSMZEG00005023659	rbm47	100	91.424	Maylandia_zebra
ENSSMAG00000009744	rbm47	100	81.538	ENSMGAG00000012226	RBM47	100	75.935	Meleagris_gallopavo
ENSSMAG00000009744	rbm47	100	78.261	ENSMAUG00000006493	Rbm47	100	79.795	Mesocricetus_auratus
ENSSMAG00000009744	rbm47	94	81.197	ENSMICG00000026417	RBM47	100	79.434	Microcebus_murinus
ENSSMAG00000009744	rbm47	100	78.462	ENSMOCG00000021170	Rbm47	100	80.000	Microtus_ochrogaster
ENSSMAG00000009744	rbm47	100	93.282	ENSMMOG00000007260	rbm47	100	92.066	Mola_mola
ENSSMAG00000009744	rbm47	57	78.135	ENSMODG00000015426	-	97	78.387	Monodelphis_domestica
ENSSMAG00000009744	rbm47	100	81.234	ENSMODG00000007003	RBM47	100	75.654	Monodelphis_domestica
ENSSMAG00000009744	rbm47	100	75.061	ENSMODG00000020561	-	100	71.334	Monodelphis_domestica
ENSSMAG00000009744	rbm47	100	94.177	ENSMALG00000005167	rbm47	100	93.830	Monopterus_albus
ENSSMAG00000009744	rbm47	100	78.462	MGP_CAROLIEiJ_G0027258	Rbm47	100	79.744	Mus_caroli
ENSSMAG00000009744	rbm47	100	78.462	ENSMUSG00000070780	Rbm47	100	79.744	Mus_musculus
ENSSMAG00000009744	rbm47	100	78.205	MGP_PahariEiJ_G0017040	Rbm47	100	79.487	Mus_pahari
ENSSMAG00000009744	rbm47	100	78.462	MGP_SPRETEiJ_G0028253	Rbm47	100	79.744	Mus_spretus
ENSSMAG00000009744	rbm47	94	83.380	ENSMPUG00000006177	RBM47	94	74.388	Mustela_putorius_furo
ENSSMAG00000009744	rbm47	100	80.051	ENSMLUG00000000889	RBM47	100	74.959	Myotis_lucifugus
ENSSMAG00000009744	rbm47	100	79.744	ENSNGAG00000003325	Rbm47	100	73.984	Nannospalax_galili
ENSSMAG00000009744	rbm47	100	93.023	ENSNBRG00000015092	rbm47	100	90.998	Neolamprologus_brichardi
ENSSMAG00000009744	rbm47	94	82.486	ENSNLEG00000017151	RBM47	100	80.769	Nomascus_leucogenys
ENSSMAG00000009744	rbm47	66	85.352	ENSMEUG00000009516	-	99	78.588	Notamacropus_eugenii
ENSSMAG00000009744	rbm47	86	85.062	ENSOPRG00000016507	-	75	85.062	Ochotona_princeps
ENSSMAG00000009744	rbm47	94	82.535	ENSODEG00000004873	RBM47	100	75.369	Octodon_degus
ENSSMAG00000009744	rbm47	100	92.010	ENSONIG00000009061	rbm47	100	91.118	Oreochromis_niloticus
ENSSMAG00000009744	rbm47	99	80.051	ENSOANG00000008978	RBM47	100	76.529	Ornithorhynchus_anatinus
ENSSMAG00000009744	rbm47	100	78.149	ENSOCUG00000012034	RBM47	100	75.041	Oryctolagus_cuniculus
ENSSMAG00000009744	rbm47	100	93.041	ENSORLG00000005847	rbm47	100	93.041	Oryzias_latipes
ENSSMAG00000009744	rbm47	100	93.041	ENSORLG00020005154	rbm47	100	93.041	Oryzias_latipes_hni
ENSSMAG00000009744	rbm47	100	92.784	ENSORLG00015000066	rbm47	100	92.784	Oryzias_latipes_hsok
ENSSMAG00000009744	rbm47	100	92.765	ENSOMEG00000010730	rbm47	100	90.232	Oryzias_melastigma
ENSSMAG00000009744	rbm47	94	83.380	ENSOGAG00000029367	-	100	74.225	Otolemur_garnettii
ENSSMAG00000009744	rbm47	94	78.310	ENSOGAG00000025193	-	100	69.622	Otolemur_garnettii
ENSSMAG00000009744	rbm47	100	68.205	ENSOARG00000012711	RBM47	100	68.197	Ovis_aries
ENSSMAG00000009744	rbm47	94	82.486	ENSPPAG00000029763	RBM47	100	75.987	Pan_paniscus
ENSSMAG00000009744	rbm47	94	82.451	ENSPPRG00000012873	RBM47	100	79.949	Panthera_pardus
ENSSMAG00000009744	rbm47	83	75.498	ENSPTIG00000017046	RBM47	100	76.096	Panthera_tigris_altaica
ENSSMAG00000009744	rbm47	94	82.486	ENSPTRG00000016006	RBM47	100	80.769	Pan_troglodytes
ENSSMAG00000009744	rbm47	94	82.486	ENSPANG00000005980	RBM47	100	80.769	Papio_anubis
ENSSMAG00000009744	rbm47	100	84.021	ENSPKIG00000013431	RBM47	98	84.021	Paramormyrops_kingsleyae
ENSSMAG00000009744	rbm47	96	80.000	ENSPKIG00000005037	rbm47	100	78.418	Paramormyrops_kingsleyae
ENSSMAG00000009744	rbm47	87	82.308	ENSPSIG00000017516	RBM47	97	77.901	Pelodiscus_sinensis
ENSSMAG00000009744	rbm47	94	91.887	ENSPMGG00000018540	rbm47	100	88.245	Periophthalmus_magnuspinnatus
ENSSMAG00000009744	rbm47	100	78.462	ENSPEMG00000011088	Rbm47	100	80.000	Peromyscus_maniculatus_bairdii
ENSSMAG00000009744	rbm47	99	90.793	ENSPFOG00000007997	rbm47	100	87.582	Poecilia_formosa
ENSSMAG00000009744	rbm47	99	90.793	ENSPLAG00000002072	rbm47	100	87.725	Poecilia_latipinna
ENSSMAG00000009744	rbm47	100	90.488	ENSPMEG00000017492	rbm47	100	90.488	Poecilia_mexicana
ENSSMAG00000009744	rbm47	100	90.932	ENSPREG00000008456	rbm47	100	90.746	Poecilia_reticulata
ENSSMAG00000009744	rbm47	93	72.753	ENSPPYG00000014688	RBM47	98	67.863	Pongo_abelii
ENSSMAG00000009744	rbm47	89	76.515	ENSPCAG00000011879	RBM47	81	80.193	Procavia_capensis
ENSSMAG00000009744	rbm47	94	83.099	ENSPCOG00000023451	RBM47	100	80.206	Propithecus_coquereli
ENSSMAG00000009744	rbm47	94	82.073	ENSPVAG00000003812	RBM47	100	74.267	Pteropus_vampyrus
ENSSMAG00000009744	rbm47	100	93.023	ENSPNYG00000022868	rbm47	100	90.701	Pundamilia_nyererei
ENSSMAG00000009744	rbm47	100	85.604	ENSPNAG00000007940	rbm47	100	86.375	Pygocentrus_nattereri
ENSSMAG00000009744	rbm47	100	78.462	ENSRNOG00000002408	Rbm47	100	74.837	Rattus_norvegicus
ENSSMAG00000009744	rbm47	94	83.427	ENSRBIG00000039601	RBM47	100	80.513	Rhinopithecus_bieti
ENSSMAG00000009744	rbm47	94	83.427	ENSRROG00000044696	RBM47	100	80.513	Rhinopithecus_roxellana
ENSSMAG00000009744	rbm47	100	72.112	ENSSBOG00000028475	RBM47	100	78.000	Saimiri_boliviensis_boliviensis
ENSSMAG00000009744	rbm47	100	81.234	ENSSHAG00000017576	RBM47	100	81.234	Sarcophilus_harrisii
ENSSMAG00000009744	rbm47	98	77.554	ENSSFOG00015024101	RBM47	100	77.554	Scleropages_formosus
ENSSMAG00000009744	rbm47	100	79.174	ENSSFOG00015012445	rbm47	100	84.833	Scleropages_formosus
ENSSMAG00000009744	rbm47	100	93.267	ENSSDUG00000022684	rbm47	100	93.538	Seriola_dumerili
ENSSMAG00000009744	rbm47	100	93.516	ENSSLDG00000003109	rbm47	100	93.538	Seriola_lalandi_dorsalis
ENSSMAG00000009744	rbm47	86	75.966	ENSSARG00000001735	RBM47	75	78.326	Sorex_araneus
ENSSMAG00000009744	rbm47	100	79.744	ENSSPUG00000007515	RBM47	100	79.744	Sphenodon_punctatus
ENSSMAG00000009744	rbm47	100	95.116	ENSSPAG00000001257	rbm47	100	95.116	Stegastes_partitus
ENSSMAG00000009744	rbm47	94	83.427	ENSSSCG00000008796	RBM47	100	75.410	Sus_scrofa
ENSSMAG00000009744	rbm47	100	80.407	ENSTGUG00000008705	RBM47	100	75.407	Taeniopygia_guttata
ENSSMAG00000009744	rbm47	100	89.796	ENSTRUG00000014050	rbm47	100	87.748	Takifugu_rubripes
ENSSMAG00000009744	rbm47	100	92.248	ENSTNIG00000006127	rbm47	100	91.391	Tetraodon_nigroviridis
ENSSMAG00000009744	rbm47	82	81.356	ENSTBEG00000001607	RBM47	76	78.663	Tupaia_belangeri
ENSSMAG00000009744	rbm47	94	83.427	ENSTTRG00000002839	RBM47	100	75.369	Tursiops_truncatus
ENSSMAG00000009744	rbm47	94	82.254	ENSUAMG00000021346	RBM47	100	74.715	Ursus_americanus
ENSSMAG00000009744	rbm47	52	80.952	ENSVPAG00000000641	-	57	71.250	Vicugna_pacos
ENSSMAG00000009744	rbm47	93	83.853	ENSVVUG00000014774	RBM47	100	74.713	Vulpes_vulpes
ENSSMAG00000009744	rbm47	100	79.847	ENSXETG00000012802	rbm47	100	74.837	Xenopus_tropicalis
ENSSMAG00000009744	rbm47	100	85.289	ENSXCOG00000000780	rbm47	100	87.339	Xiphophorus_couchianus
ENSSMAG00000009744	rbm47	100	91.184	ENSXMAG00000009874	rbm47	100	91.003	Xiphophorus_maculatus