EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSMAG00000009745 (Gene tree)
Gene ID: -
Gene Symbol: rbm25a
Alias: si:ch211-12d10.5
Full Name: RNA binding motif protein 25a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 9699 bases
Position: chr17:3138242-3147940
Accession: ZDB-GENE-090312-142
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000015930	RRM_1	PF00076.22	3.6e-07	1	1
ENSSMAP00000015930	PWI	PF01480.17	3.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000016127	-	2448	-	ENSSMAP00000015930	815 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009745's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009745's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSMAG00000009745	rbm25a	59	72.990	ENSSMAG00000002520	rbm25b	57	75.745

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009745	rbm25a	58	74.681	ENSAPOG00000015321	rbm25b	58	76.221	Acanthochromis_polyacanthus
ENSSMAG00000009745	rbm25a	58	94.280	ENSAPOG00000017757	rbm25a	57	94.268	Acanthochromis_polyacanthus
ENSSMAG00000009745	rbm25a	58	90.928	ENSACIG00000019482	rbm25a	57	91.720	Amphilophus_citrinellus
ENSSMAG00000009745	rbm25a	58	71.519	ENSAOCG00000019308	rbm25b	56	72.824	Amphiprion_ocellaris
ENSSMAG00000009745	rbm25a	54	93.318	ENSAOCG00000013695	rbm25a	55	93.274	Amphiprion_ocellaris
ENSSMAG00000009745	rbm25a	58	93.515	ENSAPEG00000007514	rbm25a	57	93.474	Amphiprion_percula
ENSSMAG00000009745	rbm25a	59	73.750	ENSAPEG00000009666	rbm25b	59	76.008	Amphiprion_percula
ENSSMAG00000009745	rbm25a	58	94.043	ENSATEG00000020676	rbm25a	75	82.258	Anabas_testudineus
ENSSMAG00000009745	rbm25a	59	73.499	ENSATEG00000017312	rbm25b	59	74.207	Anabas_testudineus
ENSSMAG00000009745	rbm25a	100	77.871	ENSACLG00000027482	rbm25a	100	73.443	Astatotilapia_calliptera
ENSSMAG00000009745	rbm25a	58	76.371	ENSACLG00000024359	rbm25b	57	77.215	Astatotilapia_calliptera
ENSSMAG00000009745	rbm25a	52	74.592	ENSAMXG00000024525	rbm25b	52	78.089	Astyanax_mexicanus
ENSSMAG00000009745	rbm25a	55	32.895	WBGene00012245	W04D2.6	86	32.083	Caenorhabditis_elegans
ENSSMAG00000009745	rbm25a	57	86.486	ENSCHOG00000008903	RBM25	63	86.301	Choloepus_hoffmanni
ENSSMAG00000009745	rbm25a	57	74.681	ENSCSEG00000020737	rbm25b	58	75.053	Cynoglossus_semilaevis
ENSSMAG00000009745	rbm25a	56	89.520	ENSCSEG00000009430	rbm25a	58	87.924	Cynoglossus_semilaevis
ENSSMAG00000009745	rbm25a	71	74.765	ENSCVAG00000005498	rbm25a	99	82.278	Cyprinodon_variegatus
ENSSMAG00000009745	rbm25a	62	73.245	ENSDARG00000006395	rbm25b	57	75.051	Danio_rerio
ENSSMAG00000009745	rbm25a	54	66.893	ENSDARG00000039266	rbm25a	99	96.203	Danio_rerio
ENSSMAG00000009745	rbm25a	86	72.973	FBgn0028474	CG4119	63	72.973	Drosophila_melanogaster
ENSSMAG00000009745	rbm25a	85	72.184	ENSEEUG00000007350	RBM25	81	73.318	Erinaceus_europaeus
ENSSMAG00000009745	rbm25a	58	72.016	ENSELUG00000007730	rbm25b	58	76.812	Esox_lucius
ENSSMAG00000009745	rbm25a	100	78.360	ENSFHEG00000005318	rbm25a	60	79.463	Fundulus_heteroclitus
ENSSMAG00000009745	rbm25a	58	76.987	ENSFHEG00000003513	rbm25b	59	78.197	Fundulus_heteroclitus
ENSSMAG00000009745	rbm25a	83	74.561	ENSGMOG00000014097	rbm25b	50	76.351	Gadus_morhua
ENSSMAG00000009745	rbm25a	60	87.451	ENSGMOG00000014070	rbm25a	64	86.260	Gadus_morhua
ENSSMAG00000009745	rbm25a	92	74.611	ENSGAFG00000001092	rbm25b	54	68.856	Gambusia_affinis
ENSSMAG00000009745	rbm25a	100	80.599	ENSGAFG00000018036	rbm25a	56	80.873	Gambusia_affinis
ENSSMAG00000009745	rbm25a	56	91.904	ENSHBUG00000016908	rbm25a	57	91.702	Haplochromis_burtoni
ENSSMAG00000009745	rbm25a	58	76.793	ENSHBUG00000018499	rbm25b	57	77.637	Haplochromis_burtoni
ENSSMAG00000009745	rbm25a	100	67.870	ENSHCOG00000000142	rbm25b	57	72.907	Hippocampus_comes
ENSSMAG00000009745	rbm25a	57	76.445	ENSKMAG00000018826	rbm25b	57	77.004	Kryptolebias_marmoratus
ENSSMAG00000009745	rbm25a	59	77.888	ENSKMAG00000016242	rbm25a	65	83.904	Kryptolebias_marmoratus
ENSSMAG00000009745	rbm25a	100	72.804	ENSLBEG00000010667	rbm25b	58	77.004	Labrus_bergylta
ENSSMAG00000009745	rbm25a	58	80.892	ENSMAMG00000000165	rbm25a	51	86.620	Mastacembelus_armatus
ENSSMAG00000009745	rbm25a	58	75.365	ENSMAMG00000004524	rbm25b	57	77.590	Mastacembelus_armatus
ENSSMAG00000009745	rbm25a	58	76.371	ENSMZEG00005001453	rbm25b	57	77.215	Maylandia_zebra
ENSSMAG00000009745	rbm25a	56	91.904	ENSMZEG00005011183	rbm25a	57	91.702	Maylandia_zebra
ENSSMAG00000009745	rbm25a	58	87.660	ENSMMOG00000009065	rbm25a	56	87.660	Mola_mola
ENSSMAG00000009745	rbm25a	58	75.413	ENSMALG00000020441	rbm25b	89	77.684	Monopterus_albus
ENSSMAG00000009745	rbm25a	56	91.685	ENSNBRG00000003761	rbm25a	57	91.489	Neolamprologus_brichardi
ENSSMAG00000009745	rbm25a	100	58.594	ENSOCUG00000013737	RBM25	85	73.019	Oryctolagus_cuniculus
ENSSMAG00000009745	rbm25a	58	74.739	ENSORLG00000011874	rbm25b	57	76.050	Oryzias_latipes
ENSSMAG00000009745	rbm25a	58	74.059	ENSORLG00020016422	rbm25b	57	75.732	Oryzias_latipes_hni
ENSSMAG00000009745	rbm25a	58	74.948	ENSORLG00015011269	rbm25b	57	76.261	Oryzias_latipes_hsok
ENSSMAG00000009745	rbm25a	71	82.022	ENSORLG00015022499	rbm25a	53	73.177	Oryzias_latipes_hsok
ENSSMAG00000009745	rbm25a	58	74.633	ENSOMEG00000023172	rbm25b	57	76.744	Oryzias_melastigma
ENSSMAG00000009745	rbm25a	53	82.522	ENSOMEG00000022138	rbm25a	59	83.061	Oryzias_melastigma
ENSSMAG00000009745	rbm25a	58	77.824	ENSPKIG00000003203	rbm25b	57	78.903	Paramormyrops_kingsleyae
ENSSMAG00000009745	rbm25a	58	73.717	ENSPMGG00000015740	rbm25b	58	75.676	Periophthalmus_magnuspinnatus
ENSSMAG00000009745	rbm25a	54	69.144	ENSPMGG00000001791	rbm25a	100	69.595	Periophthalmus_magnuspinnatus
ENSSMAG00000009745	rbm25a	59	75.362	ENSPFOG00000018808	rbm25b	57	76.891	Poecilia_formosa
ENSSMAG00000009745	rbm25a	100	80.206	ENSPFOG00000017931	rbm25a	60	80.814	Poecilia_formosa
ENSSMAG00000009745	rbm25a	100	81.993	ENSPLAG00000018338	rbm25a	60	80.814	Poecilia_latipinna
ENSSMAG00000009745	rbm25a	59	75.155	ENSPMEG00000019161	rbm25b	57	76.681	Poecilia_mexicana
ENSSMAG00000009745	rbm25a	100	82.113	ENSPMEG00000024470	rbm25a	62	80.814	Poecilia_mexicana
ENSSMAG00000009745	rbm25a	100	82.360	ENSPREG00000009228	rbm25a	59	81.055	Poecilia_reticulata
ENSSMAG00000009745	rbm25a	59	75.464	ENSPREG00000008522	rbm25b	57	77.035	Poecilia_reticulata
ENSSMAG00000009745	rbm25a	50	77.473	ENSPCAG00000006226	RBM25	79	74.090	Procavia_capensis
ENSSMAG00000009745	rbm25a	57	86.825	ENSPNYG00000022596	rbm25a	54	86.825	Pundamilia_nyererei
ENSSMAG00000009745	rbm25a	58	70.309	ENSPNAG00000012024	rbm25b	57	77.311	Pygocentrus_nattereri
ENSSMAG00000009745	rbm25a	58	77.848	ENSSFOG00015007093	rbm25	57	78.903	Scleropages_formosus
ENSSMAG00000009745	rbm25a	58	95.106	ENSSDUG00000017984	rbm25a	58	95.106	Seriola_dumerili
ENSSMAG00000009745	rbm25a	58	95.106	ENSSLDG00000010342	rbm25a	57	95.106	Seriola_lalandi_dorsalis
ENSSMAG00000009745	rbm25a	57	76.282	ENSSLDG00000024573	rbm25b	99	78.065	Seriola_lalandi_dorsalis
ENSSMAG00000009745	rbm25a	56	92.537	ENSSPAG00000011114	rbm25a	58	92.133	Stegastes_partitus
ENSSMAG00000009745	rbm25a	59	75.574	ENSSPAG00000016168	rbm25b	58	76.433	Stegastes_partitus
ENSSMAG00000009745	rbm25a	57	82.441	ENSTRUG00000003076	rbm25a	60	81.838	Takifugu_rubripes
ENSSMAG00000009745	rbm25a	58	73.695	ENSTRUG00000017964	rbm25b	58	75.316	Takifugu_rubripes
ENSSMAG00000009745	rbm25a	56	78.365	ENSTBEG00000010538	-	56	78.365	Tupaia_belangeri
ENSSMAG00000009745	rbm25a	52	73.500	ENSVPAG00000009052	RBM25	78	73.876	Vicugna_pacos
ENSSMAG00000009745	rbm25a	55	60.082	ENSXETG00000021857	rbm25	56	73.263	Xenopus_tropicalis
ENSSMAG00000009745	rbm25a	100	80.884	ENSXCOG00000004043	RBM25	57	80.658	Xiphophorus_couchianus
ENSSMAG00000009745	rbm25a	100	67.069	ENSXCOG00000002222	rbm25b	55	70.127	Xiphophorus_couchianus
ENSSMAG00000009745	rbm25a	100	71.649	ENSXMAG00000017290	rbm25b	57	76.715	Xiphophorus_maculatus
ENSSMAG00000009745	rbm25a	100	80.556	ENSXMAG00000009077	RBM25	59	81.621	Xiphophorus_maculatus