EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000009953 (Gene tree)
Gene ID: -
Gene Symbol: larp6a
Alias: acheron|achn|fi75f12|larp6|wu:fi75f12|zgc:66107
Full Name: La ribonucleoprotein domain family%2C member 6a
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 4333 bases
Position: chr5:22227396-22231728
Accession: ZDB-GENE-030131-6403
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000016244	La	PF05383.17	9.6e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000016447	-	2073	-	ENSSMAP00000016244	690 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009953's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009953's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009953	larp6a	62	59.910	ENSG00000166173	LARP6	95	57.350	Homo_sapiens
ENSSMAG00000009953	larp6a	100	86.083	ENSAPOG00000021773	larp6a	100	85.653	Acanthochromis_polyacanthus
ENSSMAG00000009953	larp6a	61	59.545	ENSAMEG00000008897	LARP6	99	59.773	Ailuropoda_melanoleuca
ENSSMAG00000009953	larp6a	72	91.252	ENSACIG00000005166	larp6a	98	92.276	Amphilophus_citrinellus
ENSSMAG00000009953	larp6a	100	85.960	ENSAOCG00000002284	larp6a	100	85.530	Amphiprion_ocellaris
ENSSMAG00000009953	larp6a	74	90.253	ENSAPEG00000008077	larp6a	100	90.253	Amphiprion_percula
ENSSMAG00000009953	larp6a	100	85.106	ENSATEG00000004018	larp6a	100	84.681	Anabas_testudineus
ENSSMAG00000009953	larp6a	59	60.329	ENSAPLG00000009914	LARP6	98	60.329	Anas_platyrhynchos
ENSSMAG00000009953	larp6a	61	59.953	ENSACAG00000008613	LARP6	98	60.185	Anolis_carolinensis
ENSSMAG00000009953	larp6a	62	59.910	ENSANAG00000024860	LARP6	95	57.350	Aotus_nancymaae
ENSSMAG00000009953	larp6a	100	84.362	ENSACLG00000018561	larp6a	97	83.644	Astatotilapia_calliptera
ENSSMAG00000009953	larp6a	60	40.326	ENSAMXG00000036816	-	94	41.492	Astyanax_mexicanus
ENSSMAG00000009953	larp6a	69	78.947	ENSAMXG00000029387	larp6a	100	61.732	Astyanax_mexicanus
ENSSMAG00000009953	larp6a	62	58.784	ENSBTAG00000003915	LARP6	95	57.764	Bos_taurus
ENSSMAG00000009953	larp6a	66	56.818	ENSCJAG00000046236	-	95	56.818	Callithrix_jacchus
ENSSMAG00000009953	larp6a	62	59.685	ENSCJAG00000018642	-	95	57.231	Callithrix_jacchus
ENSSMAG00000009953	larp6a	61	58.998	ENSCAFG00000017616	LARP6	99	59.681	Canis_familiaris
ENSSMAG00000009953	larp6a	67	56.098	ENSCAFG00020007296	LARP6	97	57.114	Canis_lupus_dingo
ENSSMAG00000009953	larp6a	62	59.009	ENSCHIG00000013742	LARP6	95	57.971	Capra_hircus
ENSSMAG00000009953	larp6a	61	57.631	ENSTSYG00000028124	LARP6	86	58.314	Carlito_syrichta
ENSSMAG00000009953	larp6a	61	58.028	ENSCAPG00000015452	LARP6	99	58.716	Cavia_aperea
ENSSMAG00000009953	larp6a	68	54.819	ENSCPOG00000022687	LARP6	97	55.422	Cavia_porcellus
ENSSMAG00000009953	larp6a	62	59.459	ENSCCAG00000036320	LARP6	95	57.143	Cebus_capucinus
ENSSMAG00000009953	larp6a	62	59.910	ENSCATG00000042432	LARP6	95	57.350	Cercocebus_atys
ENSSMAG00000009953	larp6a	63	57.582	ENSCLAG00000007893	LARP6	97	56.048	Chinchilla_lanigera
ENSSMAG00000009953	larp6a	62	59.910	ENSCSAG00000013672	LARP6	95	57.350	Chlorocebus_sabaeus
ENSSMAG00000009953	larp6a	62	58.108	ENSCHOG00000003318	LARP6	98	56.729	Choloepus_hoffmanni
ENSSMAG00000009953	larp6a	66	61.325	ENSCPBG00000010771	LARP6	88	61.325	Chrysemys_picta_bellii
ENSSMAG00000009953	larp6a	60	60.373	ENSCANG00000025833	LARP6	98	60.373	Colobus_angolensis_palliatus
ENSSMAG00000009953	larp6a	62	59.459	ENSCGRG00001024472	Larp6	95	57.851	Cricetulus_griseus_chok1gshd
ENSSMAG00000009953	larp6a	62	59.459	ENSCGRG00000004527	Larp6	95	57.851	Cricetulus_griseus_crigri
ENSSMAG00000009953	larp6a	89	86.058	ENSCSEG00000011196	larp6a	96	84.414	Cynoglossus_semilaevis
ENSSMAG00000009953	larp6a	100	80.087	ENSCVAG00000009605	larp6a	100	80.952	Cyprinodon_variegatus
ENSSMAG00000009953	larp6a	68	82.316	ENSDARG00000005355	larp6a	99	84.687	Danio_rerio
ENSSMAG00000009953	larp6a	62	58.108	ENSDNOG00000042993	LARP6	95	57.025	Dasypus_novemcinctus
ENSSMAG00000009953	larp6a	66	54.979	ENSDORG00000023910	Larp6	95	56.729	Dipodomys_ordii
ENSSMAG00000009953	larp6a	62	59.685	ENSEASG00005005490	LARP6	69	57.971	Equus_asinus_asinus
ENSSMAG00000009953	larp6a	62	59.910	ENSECAG00000014190	LARP6	96	59.243	Equus_caballus
ENSSMAG00000009953	larp6a	100	73.446	ENSELUG00000007341	larp6a	100	72.419	Esox_lucius
ENSSMAG00000009953	larp6a	63	58.590	ENSFCAG00000001361	LARP6	97	56.998	Felis_catus
ENSSMAG00000009953	larp6a	62	61.174	ENSFALG00000012389	LARP6	97	58.737	Ficedula_albicollis
ENSSMAG00000009953	larp6a	61	58.182	ENSFDAG00000019994	LARP6	83	58.864	Fukomys_damarensis
ENSSMAG00000009953	larp6a	100	81.375	ENSFHEG00000010312	larp6a	100	80.659	Fundulus_heteroclitus
ENSSMAG00000009953	larp6a	62	61.136	ENSGALG00000004046	LARP6	92	59.615	Gallus_gallus
ENSSMAG00000009953	larp6a	100	81.116	ENSGAFG00000009426	larp6a	100	80.401	Gambusia_affinis
ENSSMAG00000009953	larp6a	62	90.233	ENSGACG00000014622	larp6a	99	90.233	Gasterosteus_aculeatus
ENSSMAG00000009953	larp6a	57	60.732	ENSGAGG00000010802	LARP6	63	58.998	Gopherus_agassizii
ENSSMAG00000009953	larp6a	60	60.373	ENSGGOG00000024151	LARP6	98	60.373	Gorilla_gorilla
ENSSMAG00000009953	larp6a	100	84.362	ENSHBUG00000021014	larp6a	97	83.644	Haplochromis_burtoni
ENSSMAG00000009953	larp6a	63	58.681	ENSHGLG00000015112	LARP6	97	57.258	Heterocephalus_glaber_female
ENSSMAG00000009953	larp6a	61	58.864	ENSHGLG00100013159	LARP6	99	59.545	Heterocephalus_glaber_male
ENSSMAG00000009953	larp6a	70	85.801	ENSHCOG00000001241	larp6a	100	83.044	Hippocampus_comes
ENSSMAG00000009953	larp6a	63	36.712	ENSIPUG00000002828	-	97	40.093	Ictalurus_punctatus
ENSSMAG00000009953	larp6a	100	63.202	ENSIPUG00000010187	larp6	100	64.185	Ictalurus_punctatus
ENSSMAG00000009953	larp6a	62	58.784	ENSSTOG00000024279	LARP6	93	59.459	Ictidomys_tridecemlineatus
ENSSMAG00000009953	larp6a	62	58.427	ENSJJAG00000011013	Larp6	96	57.025	Jaculus_jaculus
ENSSMAG00000009953	larp6a	100	78.453	ENSKMAG00000001702	larp6a	100	78.670	Kryptolebias_marmoratus
ENSSMAG00000009953	larp6a	74	88.694	ENSLBEG00000000170	larp6a	100	88.694	Labrus_bergylta
ENSSMAG00000009953	larp6a	59	45.107	ENSLACG00000002786	-	95	45.823	Latimeria_chalumnae
ENSSMAG00000009953	larp6a	67	65.328	ENSLACG00000018706	LARP6	89	65.751	Latimeria_chalumnae
ENSSMAG00000009953	larp6a	59	45.564	ENSLOCG00000008547	-	80	46.667	Lepisosteus_oculatus
ENSSMAG00000009953	larp6a	100	64.562	ENSLOCG00000014592	larp6a	100	63.415	Lepisosteus_oculatus
ENSSMAG00000009953	larp6a	62	59.459	ENSLAFG00000016343	LARP6	96	60.135	Loxodonta_africana
ENSSMAG00000009953	larp6a	62	59.910	ENSMFAG00000035507	LARP6	95	59.910	Macaca_fascicularis
ENSSMAG00000009953	larp6a	62	59.910	ENSMMUG00000004429	LARP6	96	58.316	Macaca_mulatta
ENSSMAG00000009953	larp6a	62	59.910	ENSMNEG00000045335	LARP6	95	57.350	Macaca_nemestrina
ENSSMAG00000009953	larp6a	60	60.373	ENSMLEG00000038587	LARP6	98	60.373	Mandrillus_leucophaeus
ENSSMAG00000009953	larp6a	100	86.143	ENSMAMG00000005261	larp6a	100	85.429	Mastacembelus_armatus
ENSSMAG00000009953	larp6a	100	84.505	ENSMZEG00005005774	larp6a	97	83.788	Maylandia_zebra
ENSSMAG00000009953	larp6a	59	62.322	ENSMGAG00000005077	LARP6	98	62.322	Meleagris_gallopavo
ENSSMAG00000009953	larp6a	62	59.459	ENSMAUG00000018486	Larp6	95	57.438	Mesocricetus_auratus
ENSSMAG00000009953	larp6a	62	58.108	ENSMICG00000011234	LARP6	95	56.405	Microcebus_murinus
ENSSMAG00000009953	larp6a	62	58.072	ENSMOCG00000010492	Larp6	95	58.058	Microtus_ochrogaster
ENSSMAG00000009953	larp6a	74	88.499	ENSMMOG00000016284	larp6a	100	88.499	Mola_mola
ENSSMAG00000009953	larp6a	62	56.659	ENSMODG00000009034	LARP6	91	54.845	Monodelphis_domestica
ENSSMAG00000009953	larp6a	73	90.278	ENSMALG00000014439	larp6a	98	90.278	Monopterus_albus
ENSSMAG00000009953	larp6a	63	58.370	MGP_CAROLIEiJ_G0032314	Larp6	97	57.085	Mus_caroli
ENSSMAG00000009953	larp6a	63	58.150	ENSMUSG00000034839	Larp6	97	57.085	Mus_musculus
ENSSMAG00000009953	larp6a	63	58.150	MGP_PahariEiJ_G0015180	Larp6	97	57.085	Mus_pahari
ENSSMAG00000009953	larp6a	63	58.370	MGP_SPRETEiJ_G0033452	Larp6	97	57.287	Mus_spretus
ENSSMAG00000009953	larp6a	61	58.636	ENSMPUG00000017086	LARP6	99	59.318	Mustela_putorius_furo
ENSSMAG00000009953	larp6a	63	58.278	ENSMLUG00000010319	LARP6	97	56.707	Myotis_lucifugus
ENSSMAG00000009953	larp6a	62	58.784	ENSNGAG00000014238	Larp6	95	57.231	Nannospalax_galili
ENSSMAG00000009953	larp6a	74	90.253	ENSNBRG00000008120	larp6a	100	90.253	Neolamprologus_brichardi
ENSSMAG00000009953	larp6a	62	59.910	ENSNLEG00000013691	LARP6	95	57.884	Nomascus_leucogenys
ENSSMAG00000009953	larp6a	52	64.706	ENSMEUG00000002270	LARP6	83	66.667	Notamacropus_eugenii
ENSSMAG00000009953	larp6a	66	56.965	ENSODEG00000015958	LARP6	95	57.173	Octodon_degus
ENSSMAG00000009953	larp6a	74	89.709	ENSONIG00000002901	larp6a	100	89.709	Oreochromis_niloticus
ENSSMAG00000009953	larp6a	60	57.957	ENSOCUG00000009306	LARP6	99	58.295	Oryctolagus_cuniculus
ENSSMAG00000009953	larp6a	71	88.105	ENSORLG00000014256	larp6a	96	89.813	Oryzias_latipes
ENSSMAG00000009953	larp6a	100	81.466	ENSORLG00020019657	larp6a	100	81.034	Oryzias_latipes_hni
ENSSMAG00000009953	larp6a	100	81.753	ENSORLG00015017915	larp6a	100	81.322	Oryzias_latipes_hsok
ENSSMAG00000009953	larp6a	100	82.565	ENSOMEG00000017049	larp6a	100	82.421	Oryzias_melastigma
ENSSMAG00000009953	larp6a	66	56.367	ENSOGAG00000000522	LARP6	95	57.796	Otolemur_garnettii
ENSSMAG00000009953	larp6a	60	59.302	ENSOARG00000018750	LARP6	96	60.233	Ovis_aries
ENSSMAG00000009953	larp6a	60	60.373	ENSPPAG00000031247	LARP6	98	60.373	Pan_paniscus
ENSSMAG00000009953	larp6a	63	58.370	ENSPPRG00000011282	LARP6	97	56.795	Panthera_pardus
ENSSMAG00000009953	larp6a	61	58.998	ENSPTIG00000015318	LARP6	86	59.226	Panthera_tigris_altaica
ENSSMAG00000009953	larp6a	62	59.910	ENSPTRG00000007234	LARP6	95	57.350	Pan_troglodytes
ENSSMAG00000009953	larp6a	62	59.910	ENSPANG00000016362	LARP6	95	57.350	Papio_anubis
ENSSMAG00000009953	larp6a	100	63.025	ENSPKIG00000004511	LARP6	100	63.286	Paramormyrops_kingsleyae
ENSSMAG00000009953	larp6a	100	63.180	ENSPKIG00000020103	larp6a	89	76.709	Paramormyrops_kingsleyae
ENSSMAG00000009953	larp6a	71	89.676	ENSPMGG00000006958	larp6a	98	90.204	Periophthalmus_magnuspinnatus
ENSSMAG00000009953	larp6a	66	57.025	ENSPEMG00000012909	Larp6	95	57.231	Peromyscus_maniculatus_bairdii
ENSSMAG00000009953	larp6a	62	57.623	ENSPCIG00000020765	LARP6	91	55.533	Phascolarctos_cinereus
ENSSMAG00000009953	larp6a	74	87.767	ENSPFOG00000014175	larp6a	100	87.767	Poecilia_formosa
ENSSMAG00000009953	larp6a	100	81.020	ENSPLAG00000011105	larp6a	100	80.878	Poecilia_latipinna
ENSSMAG00000009953	larp6a	100	81.392	ENSPMEG00000011085	larp6a	100	80.824	Poecilia_mexicana
ENSSMAG00000009953	larp6a	100	80.742	ENSPREG00000008067	larp6a	100	80.456	Poecilia_reticulata
ENSSMAG00000009953	larp6a	62	59.910	ENSPPYG00000006604	LARP6	95	57.764	Pongo_abelii
ENSSMAG00000009953	larp6a	62	58.108	ENSPCOG00000022934	LARP6	95	56.289	Propithecus_coquereli
ENSSMAG00000009953	larp6a	62	59.594	ENSPVAG00000005618	LARP6	95	58.091	Pteropus_vampyrus
ENSSMAG00000009953	larp6a	74	90.253	ENSPNYG00000009835	larp6a	100	90.253	Pundamilia_nyererei
ENSSMAG00000009953	larp6a	70	78.200	ENSPNAG00000017966	larp6a	81	78.600	Pygocentrus_nattereri
ENSSMAG00000009953	larp6a	63	58.681	ENSRNOG00000012438	Larp6	97	57.576	Rattus_norvegicus
ENSSMAG00000009953	larp6a	60	60.465	ENSRBIG00000032902	LARP6	88	59.729	Rhinopithecus_bieti
ENSSMAG00000009953	larp6a	62	59.910	ENSRROG00000043074	LARP6	95	57.350	Rhinopithecus_roxellana
ENSSMAG00000009953	larp6a	60	60.373	ENSSBOG00000024190	LARP6	98	60.373	Saimiri_boliviensis_boliviensis
ENSSMAG00000009953	larp6a	61	55.708	ENSSHAG00000018495	LARP6	99	57.078	Sarcophilus_harrisii
ENSSMAG00000009953	larp6a	68	73.319	ENSSFOG00015002254	LARP6	92	73.319	Scleropages_formosus
ENSSMAG00000009953	larp6a	70	73.306	ENSSFOG00015023268	larp6a	95	73.306	Scleropages_formosus
ENSSMAG00000009953	larp6a	100	88.953	ENSSDUG00000007438	larp6a	100	88.379	Seriola_dumerili
ENSSMAG00000009953	larp6a	100	88.809	ENSSLDG00000016647	larp6a	100	87.661	Seriola_lalandi_dorsalis
ENSSMAG00000009953	larp6a	60	63.270	ENSSPUG00000011312	LARP6	97	63.270	Sphenodon_punctatus
ENSSMAG00000009953	larp6a	100	87.231	ENSSPAG00000020502	larp6a	100	86.370	Stegastes_partitus
ENSSMAG00000009953	larp6a	62	59.685	ENSSSCG00000004974	LARP6	95	57.764	Sus_scrofa
ENSSMAG00000009953	larp6a	59	60.706	ENSTGUG00000005808	LARP6	98	60.706	Taeniopygia_guttata
ENSSMAG00000009953	larp6a	100	77.011	ENSTRUG00000003151	larp6a	100	77.011	Takifugu_rubripes
ENSSMAG00000009953	larp6a	70	83.333	ENSTNIG00000011926	larp6a	100	83.333	Tetraodon_nigroviridis
ENSSMAG00000009953	larp6a	60	58.314	ENSTBEG00000015077	LARP6	98	59.016	Tupaia_belangeri
ENSSMAG00000009953	larp6a	61	59.681	ENSUAMG00000010467	LARP6	85	59.909	Ursus_americanus
ENSSMAG00000009953	larp6a	61	58.770	ENSVVUG00000015227	LARP6	94	59.453	Vulpes_vulpes
ENSSMAG00000009953	larp6a	67	63.333	ENSXETG00000020340	larp6	94	63.093	Xenopus_tropicalis
ENSSMAG00000009953	larp6a	69	89.706	ENSXCOG00000012654	larp6a	98	89.706	Xiphophorus_couchianus
ENSSMAG00000009953	larp6a	100	81.429	ENSXMAG00000021015	larp6a	96	80.571	Xiphophorus_maculatus