EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000009976 (Gene tree)
Gene ID: -
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 homolog%2C ribonucleoprotein
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Plus strand
Length: 2930 bases
Position: chr13:5528701-5531630
Accession: ZDB-GENE-040426-893
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000016267	Gar1	PF04410.14	2.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000016474	-	1610	-	ENSSMAP00000016267	218 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000009976's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000009976's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000009976	gar1	50	96.296	ENSAPOG00000019754	gar1	51	96.296	Acanthochromis_polyacanthus
ENSSMAG00000009976	gar1	50	96.296	ENSAOCG00000020947	gar1	50	96.296	Amphiprion_ocellaris
ENSSMAG00000009976	gar1	50	96.296	ENSAPEG00000001676	gar1	50	96.296	Amphiprion_percula
ENSSMAG00000009976	gar1	50	95.370	ENSATEG00000003733	gar1	50	95.370	Anabas_testudineus
ENSSMAG00000009976	gar1	50	90.000	ENSCHIG00000016026	-	51	91.589	Capra_hircus
ENSSMAG00000009976	gar1	57	88.800	ENSTSYG00000013668	-	50	91.589	Carlito_syrichta
ENSSMAG00000009976	gar1	53	88.793	ENSCATG00000021854	GAR1	54	91.589	Cercocebus_atys
ENSSMAG00000009976	gar1	50	89.091	ENSCLAG00000005335	GAR1	69	94.545	Chinchilla_lanigera
ENSSMAG00000009976	gar1	50	94.444	ENSCVAG00000002103	gar1	52	94.444	Cyprinodon_variegatus
ENSSMAG00000009976	gar1	50	90.909	ENSEASG00005004658	GAR1	50	92.523	Equus_asinus_asinus
ENSSMAG00000009976	gar1	50	90.000	ENSECAG00000013624	GAR1	54	91.589	Equus_caballus
ENSSMAG00000009976	gar1	51	93.694	ENSFHEG00000008068	gar1	50	93.519	Fundulus_heteroclitus
ENSSMAG00000009976	gar1	50	93.519	ENSGMOG00000012419	gar1	58	83.077	Gadus_morhua
ENSSMAG00000009976	gar1	50	94.545	ENSIPUG00000003194	gar1	51	94.444	Ictalurus_punctatus
ENSSMAG00000009976	gar1	50	88.991	ENSSTOG00000005577	GAR1	71	94.545	Ictidomys_tridecemlineatus
ENSSMAG00000009976	gar1	51	93.694	ENSKMAG00000010402	gar1	51	94.444	Kryptolebias_marmoratus
ENSSMAG00000009976	gar1	75	69.006	ENSMFAG00000003572	-	52	77.570	Macaca_fascicularis
ENSSMAG00000009976	gar1	52	92.982	ENSMAUG00000016788	Gar1	70	96.364	Mesocricetus_auratus
ENSSMAG00000009976	gar1	57	88.710	ENSMOCG00000001340	Gar1	70	96.364	Microtus_ochrogaster
ENSSMAG00000009976	gar1	52	85.088	ENSMODG00000005897	GAR1	54	75.969	Monodelphis_domestica
ENSSMAG00000009976	gar1	52	92.105	MGP_CAROLIEiJ_G0025627	Gar1	70	96.364	Mus_caroli
ENSSMAG00000009976	gar1	54	90.598	ENSMUSG00000028010	Gar1	70	96.364	Mus_musculus
ENSSMAG00000009976	gar1	54	90.598	MGP_PahariEiJ_G0027076	Gar1	70	96.364	Mus_pahari
ENSSMAG00000009976	gar1	54	90.598	MGP_SPRETEiJ_G0026580	Gar1	70	96.364	Mus_spretus
ENSSMAG00000009976	gar1	50	90.000	ENSNGAG00000008268	Gar1	71	94.545	Nannospalax_galili
ENSSMAG00000009976	gar1	50	90.000	ENSNLEG00000016578	GAR1	50	91.589	Nomascus_leucogenys
ENSSMAG00000009976	gar1	65	84.507	ENSODEG00000011083	GAR1	65	82.677	Octodon_degus
ENSSMAG00000009976	gar1	50	94.444	ENSORLG00015017643	gar1	78	82.353	Oryzias_latipes_hsok
ENSSMAG00000009976	gar1	53	88.793	ENSPTRG00000016364	GAR1	54	91.589	Pan_troglodytes
ENSSMAG00000009976	gar1	50	92.593	ENSPFOG00000024155	gar1	51	92.593	Poecilia_formosa
ENSSMAG00000009976	gar1	50	92.593	ENSPLAG00000015056	gar1	51	92.593	Poecilia_latipinna
ENSSMAG00000009976	gar1	50	93.519	ENSPMEG00000009320	gar1	52	93.519	Poecilia_mexicana
ENSSMAG00000009976	gar1	52	92.982	ENSRNOG00000061146	Gar1	63	93.458	Rattus_norvegicus
ENSSMAG00000009976	gar1	52	90.265	ENSRBIG00000019547	GAR1	54	91.589	Rhinopithecus_bieti
ENSSMAG00000009976	gar1	51	74.107	ENSRBIG00000042411	-	52	74.766	Rhinopithecus_bieti
ENSSMAG00000009976	gar1	53	88.793	ENSRROG00000028454	GAR1	54	91.589	Rhinopithecus_roxellana
ENSSMAG00000009976	gar1	51	74.107	ENSRROG00000044348	-	51	74.766	Rhinopithecus_roxellana
ENSSMAG00000009976	gar1	50	97.222	ENSSLDG00000023264	gar1	51	97.222	Seriola_lalandi_dorsalis
ENSSMAG00000009976	gar1	62	80.147	ENSSPUG00000008707	GAR1	59	93.396	Sphenodon_punctatus
ENSSMAG00000009976	gar1	50	90.000	ENSSSCG00000009137	GAR1	53	91.589	Sus_scrofa
ENSSMAG00000009976	gar1	50	92.593	ENSTRUG00000020580	gar1	52	92.593	Takifugu_rubripes
ENSSMAG00000009976	gar1	52	90.265	ENSVVUG00000017612	GAR1	55	91.589	Vulpes_vulpes