EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSMAG00000010067 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.4
Alias: fj08f03|fj10b02|im:7041150|wu:fj08f03|wu:fj10b02
Full Name: si:ch211-153b23.4
Gene Type: protein_coding
Species: Scophthalmus_maximus
Status: putative
Strand: Minus strand
Length: 4132 bases
Position: chr13:6031967-6036098
Accession: ZDB-GENE-030131-7332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSMAP00000016409	Sua5_yciO_yrdC	PF01300.18	8.6e-27	1	1
ENSSMAP00000016401	Sua5_yciO_yrdC	PF01300.18	8.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSMAT00000016616	-	3023	-	ENSSMAP00000016409	865 (aa)	-	A0A2U9C7Q4
ENSSMAT00000016608	-	3569	-	ENSSMAP00000016401	876 (aa)	-	-

Gene Model

Click here to download ENSSMAG00000010067's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSMAG00000010067's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSMAG00000010067	si:ch211-153b23.4	100	83.086	ENSAPOG00000006178	si:ch211-153b23.4	99	83.086	Acanthochromis_polyacanthus
ENSSMAG00000010067	si:ch211-153b23.4	95	85.042	ENSAPOG00000006144	si:ch211-153b23.4	99	83.353	Acanthochromis_polyacanthus
ENSSMAG00000010067	si:ch211-153b23.4	95	84.532	ENSACIG00000006997	si:ch211-153b23.4	98	84.532	Amphilophus_citrinellus
ENSSMAG00000010067	si:ch211-153b23.4	92	82.272	ENSAOCG00000010999	si:ch211-153b23.4	97	82.272	Amphiprion_ocellaris
ENSSMAG00000010067	si:ch211-153b23.4	97	83.157	ENSAPEG00000014665	si:ch211-153b23.4	99	83.157	Amphiprion_percula
ENSSMAG00000010067	si:ch211-153b23.4	100	85.143	ENSATEG00000004948	si:ch211-153b23.4	99	85.143	Anabas_testudineus
ENSSMAG00000010067	si:ch211-153b23.4	94	61.650	ENSAPLG00000013596	-	99	61.650	Anas_platyrhynchos
ENSSMAG00000010067	si:ch211-153b23.4	100	79.634	ENSACLG00000005471	si:ch211-153b23.4	99	79.634	Astatotilapia_calliptera
ENSSMAG00000010067	si:ch211-153b23.4	97	70.937	ENSAMXG00000013879	si:ch211-153b23.4	99	70.937	Astyanax_mexicanus
ENSSMAG00000010067	si:ch211-153b23.4	73	30.186	ENSAMXG00000038564	si:ch211-153b23.3	72	30.186	Astyanax_mexicanus
ENSSMAG00000010067	si:ch211-153b23.4	97	82.423	ENSCSEG00000014838	si:ch211-153b23.4	99	82.423	Cynoglossus_semilaevis
ENSSMAG00000010067	si:ch211-153b23.4	94	81.953	ENSCVAG00000021145	si:ch211-153b23.4	100	81.953	Cyprinodon_variegatus
ENSSMAG00000010067	si:ch211-153b23.4	99	68.641	ENSDARG00000077169	si:ch211-153b23.4	98	68.641	Danio_rerio
ENSSMAG00000010067	si:ch211-153b23.4	96	73.565	ENSELUG00000004961	si:ch211-153b23.4	94	73.565	Esox_lucius
ENSSMAG00000010067	si:ch211-153b23.4	94	58.507	ENSFALG00000011343	-	94	58.507	Ficedula_albicollis
ENSSMAG00000010067	si:ch211-153b23.4	85	80.237	ENSFHEG00000009888	si:ch211-153b23.4	83	80.237	Fundulus_heteroclitus
ENSSMAG00000010067	si:ch211-153b23.4	93	82.647	ENSFHEG00000010001	si:ch211-153b23.4	100	82.647	Fundulus_heteroclitus
ENSSMAG00000010067	si:ch211-153b23.4	89	81.525	ENSGAFG00000007442	si:ch211-153b23.4	93	81.525	Gambusia_affinis
ENSSMAG00000010067	si:ch211-153b23.4	97	83.174	ENSGACG00000018253	si:ch211-153b23.4	98	83.174	Gasterosteus_aculeatus
ENSSMAG00000010067	si:ch211-153b23.4	80	64.040	ENSGAGG00000024601	-	93	64.040	Gopherus_agassizii
ENSSMAG00000010067	si:ch211-153b23.4	78	81.696	ENSHBUG00000000013	si:ch211-153b23.4	89	81.696	Haplochromis_burtoni
ENSSMAG00000010067	si:ch211-153b23.4	96	71.773	ENSIPUG00000015205	si:ch211-153b23.4	98	71.773	Ictalurus_punctatus
ENSSMAG00000010067	si:ch211-153b23.4	94	84.663	ENSKMAG00000006829	si:ch211-153b23.4	100	84.663	Kryptolebias_marmoratus
ENSSMAG00000010067	si:ch211-153b23.4	100	81.600	ENSKMAG00000006919	-	99	81.600	Kryptolebias_marmoratus
ENSSMAG00000010067	si:ch211-153b23.4	100	83.638	ENSLBEG00000026309	si:ch211-153b23.4	100	83.638	Labrus_bergylta
ENSSMAG00000010067	si:ch211-153b23.4	95	63.913	ENSLACG00000017592	si:ch211-153b23.4	98	63.913	Latimeria_chalumnae
ENSSMAG00000010067	si:ch211-153b23.4	94	88.807	ENSMAMG00000009277	si:ch211-153b23.4	98	88.807	Mastacembelus_armatus
ENSSMAG00000010067	si:ch211-153b23.4	95	88.509	ENSMAMG00000009358	si:ch211-153b23.4	99	88.509	Mastacembelus_armatus
ENSSMAG00000010067	si:ch211-153b23.4	94	81.127	ENSMZEG00005011433	si:ch211-153b23.4	99	81.127	Maylandia_zebra
ENSSMAG00000010067	si:ch211-153b23.4	94	61.118	ENSMGAG00000005478	-	99	61.118	Meleagris_gallopavo
ENSSMAG00000010067	si:ch211-153b23.4	94	85.538	ENSMMOG00000004425	si:ch211-153b23.4	100	85.538	Mola_mola
ENSSMAG00000010067	si:ch211-153b23.4	92	81.054	ENSNBRG00000013392	si:ch211-153b23.4	100	81.054	Neolamprologus_brichardi
ENSSMAG00000010067	si:ch211-153b23.4	100	79.977	ENSONIG00000017875	si:ch211-153b23.4	100	79.977	Oreochromis_niloticus
ENSSMAG00000010067	si:ch211-153b23.4	72	30.530	ENSORLG00000006161	si:ch211-153b23.3	73	30.530	Oryzias_latipes
ENSSMAG00000010067	si:ch211-153b23.4	99	79.840	ENSORLG00000006169	si:ch211-153b23.4	99	79.840	Oryzias_latipes
ENSSMAG00000010067	si:ch211-153b23.4	99	80.412	ENSORLG00020009905	si:ch211-153b23.4	99	80.412	Oryzias_latipes_hni
ENSSMAG00000010067	si:ch211-153b23.4	99	80.069	ENSORLG00015003709	si:ch211-153b23.4	99	80.069	Oryzias_latipes_hsok
ENSSMAG00000010067	si:ch211-153b23.4	97	81.481	ENSOMEG00000007682	si:ch211-153b23.4	99	79.931	Oryzias_melastigma
ENSSMAG00000010067	si:ch211-153b23.4	98	68.390	ENSPKIG00000025681	si:ch211-153b23.4	99	68.390	Paramormyrops_kingsleyae
ENSSMAG00000010067	si:ch211-153b23.4	99	66.551	ENSPKIG00000014429	si:ch211-153b23.4	99	66.551	Paramormyrops_kingsleyae
ENSSMAG00000010067	si:ch211-153b23.4	94	64.364	ENSPMGG00000001313	si:ch211-153b23.4	90	64.648	Periophthalmus_magnuspinnatus
ENSSMAG00000010067	si:ch211-153b23.4	78	82.500	ENSPFOG00000012164	si:ch211-153b23.4	95	82.500	Poecilia_formosa
ENSSMAG00000010067	si:ch211-153b23.4	93	81.219	ENSPLAG00000016295	si:ch211-153b23.4	99	81.219	Poecilia_latipinna
ENSSMAG00000010067	si:ch211-153b23.4	90	80.051	ENSPMEG00000007538	si:ch211-153b23.4	95	80.051	Poecilia_mexicana
ENSSMAG00000010067	si:ch211-153b23.4	94	80.882	ENSPNYG00000000250	si:ch211-153b23.4	99	80.882	Pundamilia_nyererei
ENSSMAG00000010067	si:ch211-153b23.4	96	73.830	ENSPNAG00000019554	si:ch211-153b23.4	94	73.830	Pygocentrus_nattereri
ENSSMAG00000010067	si:ch211-153b23.4	99	67.617	ENSSFOG00015003920	-	99	67.617	Scleropages_formosus
ENSSMAG00000010067	si:ch211-153b23.4	99	71.810	ENSSFOG00015010891	si:ch211-153b23.4	99	71.810	Scleropages_formosus
ENSSMAG00000010067	si:ch211-153b23.4	78	85.693	ENSSDUG00000006931	si:ch211-153b23.4	92	85.693	Seriola_dumerili
ENSSMAG00000010067	si:ch211-153b23.4	87	79.167	ENSSDUG00000006842	si:ch211-153b23.4	97	79.167	Seriola_dumerili
ENSSMAG00000010067	si:ch211-153b23.4	94	86.897	ENSSDUG00000006671	si:ch211-153b23.4	100	86.897	Seriola_dumerili
ENSSMAG00000010067	si:ch211-153b23.4	94	60.949	ENSTGUG00000005499	-	99	60.949	Taeniopygia_guttata
ENSSMAG00000010067	si:ch211-153b23.4	93	82.695	ENSTRUG00000003247	si:ch211-153b23.4	100	82.695	Takifugu_rubripes
ENSSMAG00000010067	si:ch211-153b23.4	95	80.947	ENSTNIG00000008958	si:ch211-153b23.4	99	80.947	Tetraodon_nigroviridis
ENSSMAG00000010067	si:ch211-153b23.4	59	30.636	ENSTNIG00000008962	si:ch211-153b23.3	56	30.636	Tetraodon_nigroviridis
ENSSMAG00000010067	si:ch211-153b23.4	99	53.829	ENSXETG00000004489	-	97	53.829	Xenopus_tropicalis
ENSSMAG00000010067	si:ch211-153b23.4	96	79.856	ENSXMAG00000009416	-	98	79.856	Xiphophorus_maculatus
ENSSMAG00000010067	si:ch211-153b23.4	96	81.415	ENSXMAG00000021388	si:ch211-153b23.4	100	81.415	Xiphophorus_maculatus